Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F02016 Erythranthe guttata HOM05D004534 ORTHO05D005413 1.2e-225 786.2 386 100.0
ECA233G2770 Erigeron canadensis HOM05D004534 ORTHO05D000452 7.4e-148 527.7 358 71.5
RcHm_v2.0_Chr1g0364391 Rosa chinensis HOM05D004534 ORTHO05D005413 2.4e-146 522.7 381 68.2
Prupe.2G220600 Prunus persica HOM05D004534 ORTHO05D005413 4.5e-145 518.5 348 72.4
GSVIVG01016358001 Vitis vinifera HOM05D004534 ORTHO05D005413 1.3e-144 516.9 373 69.4
Cfa001577 Carpinus fangiana HOM05D004534 ORTHO05D005413 1.5e-143 513.5 369 68.3
Lsat_1_v5_gn_8_20980 Lactuca sativa HOM05D004534 ORTHO05D005413 5.5e-143 511.5 366 67.8
CSS0028612 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 3.6e-142 508.8 405 63.2
Potri.010G216000 Populus trichocarpa HOM05D004534 ORTHO05D005413 6.1e-142 508.1 353 70.8
Atru.chr12.616 Acer truncatum HOM05D004534 ORTHO05D005413 2.3e-141 506.1 374 67.4
Dinv31374 Davidia involucrata HOM05D004534 ORTHO05D005413 8.8e-141 504.2 346 70.5
PGR044G2491 Punica granatum HOM05D004534 ORTHO05D005413 2.0e-140 503.1 348 71.0
Ciclev10031838m.g Citrus clementina HOM05D004534 ORTHO05D005413 5.7e-140 501.5 344 71.8
HanXRQChr08g0219701 Helianthus annuus HOM05D004534 ORTHO05D005413 5.7e-140 501.5 387 65.6
CiPaw.01G277800 Carya illinoinensis HOM05D004534 ORTHO05D005413 2.2e-139 499.6 380 65.8
Haze_16951 Corylus avellana HOM05D004534 ORTHO05D005413 3.7e-139 498.8 395 65.1
FAN06G4936 Fragaria x ananassa HOM05D004534 ORTHO05D005413 3.7e-139 498.8 374 65.5
TWI38G2053 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 8.2e-139 497.7 368 66.3
Potri.008G045700 Populus trichocarpa HOM05D004534 ORTHO05D005413 1.8e-138 496.5 348 68.4
GSVIVG01025090001 Vitis vinifera HOM05D004534 ORTHO05D005413 2.7e-137 492.7 356 66.9
Cpa.g.sc139.34 Carica papaya HOM05D004534 ORTHO05D005413 3.5e-137 492.3 382 63.4
Peaxi162Scf01024g00128 Petunia axillaris HOM05D004534 ORTHO05D005413 3.5e-137 492.3 413 63.2
MD07G1181700 Malus domestica HOM05D004534 ORTHO05D005413 4.5e-137 491.9 330 71.8
Actinidia03016 Actinidia chinensis HOM05D004534 ORTHO05D005413 1.0e-136 490.7 346 69.9
Solyc06g075540.3 Solanum lycopersicum HOM05D004534 ORTHO05D005413 2.9e-136 489.2 345 66.4
Atru.chr3.3749 Acer truncatum HOM05D004534 ORTHO05D005413 3.8e-136 488.8 357 66.7
Peaxi162Scf00072g00025 Petunia axillaris HOM05D004534 ORTHO05D005413 1.1e-135 487.3 345 66.4
AT3G45740 Arabidopsis thaliana HOM05D004534 ORTHO05D005413 2.5e-135 486.1 363 64.5
Cfa011397 Carpinus fangiana HOM05D004534 ORTHO05D005413 3.2e-135 485.7 356 66.0
PGSC0003DMG402006611 Solanum tuberosum HOM05D004534 ORTHO05D005413 7.2e-135 484.6 345 66.1
Nn2g10612 Nelumbo nucifera HOM05D004534 ORTHO05D005413 9.4e-135 484.2 375 61.9
Nitab4.5_0000270g0130 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.1e-134 483.0 359 63.8
Thecc.10G065400 Theobroma cacao HOM05D004534 ORTHO05D005413 2.7e-134 482.6 379 62.5
CARHR149920 Cardamine hirsuta HOM05D004534 ORTHO05D005413 1.0e-133 480.7 376 61.7
CAN.G394.3 Capsicum annuum HOM05D004534 ORTHO05D005413 1.4e-133 480.3 348 65.2
AL5G24380 Arabidopsis lyrata HOM05D004534 ORTHO05D005413 2.3e-133 479.6 378 62.2
Nitab4.5_0004774g0020 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.3e-133 479.6 352 64.2
ATR0582G124 Amborella trichopoda HOM05D004534 ORTHO05D005413 3.0e-133 479.2 344 67.2
Thhalv10002577m.g Eutrema salsugineum HOM05D004534 ORTHO05D005413 3.0e-133 479.2 378 62.7
COL.COLO4_23775 Corchorus olitorius HOM05D004534 ORTHO05D005413 4.0e-133 478.8 343 66.2
Hma1.2p1_2042F.1_g312230 Hydrangea macrophylla HOM05D004534 ORTHO05D005413 4.0e-133 478.8 373 63.8
A06p21280 Brassica napus HOM05D004534 ORTHO05D005413 8.8e-133 477.6 358 65.4
BraA06t25216Z Brassica rapa HOM05D004534 ORTHO05D005413 8.8e-133 477.6 366 64.8
Sp5g15770 Schrenkiella parvula HOM05D004534 ORTHO05D005413 1.2e-132 477.2 378 63.0
Gorai.009G315700 Gossypium raimondii HOM05D004534 ORTHO05D005413 4.4e-132 475.3 364 63.7
Manes.11G138500 Manihot esculenta HOM05D004534 ORTHO05D005413 7.5e-132 474.6 346 64.7
QL01p035546 Quercus lobata HOM05D004534 ORTHO05D005413 7.5e-132 474.6 365 63.8
PSO339G4951 Papaver somniferum HOM05D004534 ORTHO05D005413 9.8e-132 474.2 348 66.4
DCAR_018857 Daucus carota HOM05D004534 ORTHO05D005413 2.8e-131 472.6 359 64.9
Dinv32819 Davidia involucrata HOM05D004534 ORTHO05D005413 2.8e-131 472.6 349 65.3
Gohir.D05G298500 Gossypium hirsutum HOM05D004534 ORTHO05D005413 2.8e-131 472.6 367 63.5
Aqoxy4G03153 Aquilegia oxysepala HOM05D004534 ORTHO05D005413 3.7e-131 472.2 346 64.7
arahy.Tifrunner.gnm1.ann1.AW7LWX Arachis hypogaea HOM05D004534 ORTHO05D005413 3.7e-131 472.2 359 63.2
PSO384G4947 Papaver somniferum HOM05D004534 ORTHO05D005413 3.7e-131 472.2 347 66.6
Ciclev10030338m.g Citrus clementina HOM05D004534 ORTHO05D005413 4.8e-131 471.9 359 63.5
BolC3t19273H Brassica oleracea HOM05D004534 ORTHO05D005413 6.3e-131 471.5 366 63.7
MD11G1120100 Malus domestica HOM05D004534 ORTHO05D005413 8.3e-131 471.1 359 63.2
arahy.Tifrunner.gnm1.ann1.NM19P7 Arachis hypogaea HOM05D004534 ORTHO05D005413 1.1e-130 470.7 364 62.4
BcaC01g01956 Brassica carinata HOM05D004534 ORTHO05D005413 1.4e-130 470.3 366 63.7
C03p70180 Brassica napus HOM05D004534 ORTHO05D005413 1.4e-130 470.3 366 63.7
THA.LOC104814850 Tarenaya hassleriana HOM05D004534 ORTHO05D005413 1.4e-130 470.3 344 64.8
Aa31LG4G14970 Aethionema arabicum HOM05D004534 ORTHO05D005413 2.4e-130 469.5 376 61.7
CANSAT54G1456 Cannabis sativa HOM05D004534 ORTHO05D005413 3.5e-129 465.7 363 61.7
Oeu055059.2 Olea europaea HOM05D004534 ORTHO05D005413 7.7e-129 464.5 343 67.3
TWI31G1398 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 7.7e-129 464.5 356 63.2
Lj3g0025326 Lotus japonicus HOM05D004534 ORTHO05D005413 1.7e-128 463.4 347 64.8
CsaV3_5G026040 Cucumis sativus L. HOM05D004534 ORTHO05D005413 2.3e-128 463.0 352 63.6
Rhsim01G0222900 Rhododendron simsii HOM05D004534 ORTHO05D005413 2.9e-128 462.6 348 64.4
Lalb_Chr24g0394391 Lupinus albus HOM05D004534 ORTHO05D005413 5.0e-128 461.8 349 63.9
Glyma.13G330000 Glycine max HOM05D004534 ORTHO05D005413 1.1e-127 460.7 354 62.1
RcHm_v2.0_Chr5g0061761 Rosa chinensis HOM05D004534 ORTHO05D005413 2.5e-127 459.5 354 61.9
PGR102G1844 Punica granatum HOM05D004534 ORTHO05D005413 3.2e-127 459.1 354 62.4
Nitab4.5_0000561g0030 Nicotiana tabacum HOM05D004534 ORTHO05D005413 4.2e-127 458.8 359 65.2
FvH4_3g34110 Fragaria vesca HOM05D004534 ORTHO05D005413 5.5e-127 458.4 370 58.9
CSS0009646 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 7.2e-127 458.0 367 61.9
FAN11G3381 Fragaria x ananassa HOM05D004534 ORTHO05D005413 7.2e-127 458.0 371 59.3
Thecc.09G335300 Theobroma cacao HOM05D004534 ORTHO05D005413 7.2e-127 458.0 353 63.5
EL10Ac2g03539 Beta vulgaris HOM05D004534 ORTHO05D005413 9.5e-127 457.6 354 63.0
Sed0013966 Sechium edule HOM05D004534 ORTHO05D005413 1.2e-126 457.2 362 60.2
FAN03G3228 Fragaria x ananassa HOM05D004534 ORTHO05D005413 2.1e-126 456.4 374 61.5
Zm00001eb397220 Zea mays HOM05D004534 ORTHO05D005413 3.6e-126 455.7 344 62.5
Phvul.L001232 Phaseolus vulgaris HOM05D004534 ORTHO05D005413 8.0e-126 454.5 347 63.1
FAN01G1783 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.0e-125 454.1 377 61.0
TPR.G11635 Trifolium pratense HOM05D004534 ORTHO05D005413 1.0e-125 454.1 357 61.9
HPP92_003600 Vanilla planifolia HOM05D004534 ORTHO05D005413 4.0e-125 452.2 355 60.3
Psat5g281360 Pisum sativum HOM05D004534 ORTHO05D005413 8.9e-125 451.1 357 61.6
MELO3C026849.2 Cucumis melo HOM05D004534 ORTHO05D005413 1.5e-124 450.3 360 59.4
Migut.D02166 Erythranthe guttata HOM05D004534 ORTHO05D005413 2.6e-124 449.5 347 63.1
Gohir.A08G000096 Gossypium hirsutum HOM05D004534 ORTHO05D005413 5.7e-124 448.4 367 62.4
Gohir.D08G009000 Gossypium hirsutum HOM05D004534 ORTHO05D005413 5.7e-124 448.4 367 62.1
FAN21G3213 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.7e-123 446.8 365 58.9
CsaV3_1G012750 Cucumis sativus L. HOM05D004534 ORTHO05D005413 8.3e-123 444.5 357 59.7
Medtr2g095830 Medicago truncatula HOM05D004534 ORTHO05D005413 8.3e-123 444.5 349 63.3
vmacro14490 Vaccinium macrocarpon HOM05D004534 ORTHO05D005413 4.1e-122 442.2 404 56.7
MSTRG.18620 Avicennia marina HOM05D004534 ORTHO05D005413 9.2e-122 441.0 350 61.1
Cc01_g11880 Coffea canephora HOM05D004534 ORTHO05D005413 2.0e-121 439.9 354 60.7
Sabra08G0032000 Salix brachista HOM05D004534 ORTHO05D005413 2.0e-121 439.9 371 59.8
Ca_01369_v3 Cicer arietinum L. HOM05D004534 ORTHO05D005413 4.5e-121 438.7 341 63.0
Os03g0284500 Oryza sativa ssp. japonica HOM05D004534 ORTHO05D005413 1.7e-120 436.8 344 59.3
Manes.10G040600 Manihot esculenta HOM05D004534 ORTHO05D005413 1.5e-119 433.7 347 64.8
unitig_37.g12680 Utricularia gibba HOM05D004534 ORTHO05D005413 2.5e-119 433.0 344 60.5
Sabra10G0167000 Salix brachista HOM05D004534 ORTHO05D005413 2.3e-117 426.4 370 61.6
Ah.10g033090 Amaranthus hybridus HOM05D004534 ORTHO05D005413 1.2e-116 424.1 341 60.7
Hund18962 Selenicereus undatus HOM05D004534 ORTHO05D005413 1.2e-116 424.1 381 57.7
FAN06G3998 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.5e-116 423.7 529 47.1
QL08p057247 Quercus lobata HOM05D004534 ORTHO05D005413 2.0e-116 423.3 546 44.5
CDE04G1344 Ceratophyllum demersum HOM05D004534 ORTHO05D005413 2.6e-116 422.9 401 55.6
BcaB01g01071 Brassica carinata HOM05D004534 ORTHO05D005413 4.4e-116 422.2 313 64.5
VMungo1080G0465 Vigna mungo HOM05D004534 ORTHO05D005413 5.7e-116 421.8 347 59.7
MELO3C025495.2 Cucumis melo HOM05D004534 ORTHO05D005413 7.5e-116 421.4 367 58.0
Duzib106G1068 Durio zibethinus HOM05D004534 ORTHO05D005413 1.1e-114 417.5 360 59.4
Lj1A926G31 Lonicera japonica HOM05D004534 ORTHO05D005413 1.6e-113 413.7 370 61.9
Nitab4.5_0000830g0040 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.5e-111 407.1 348 61.8
EL10Ac7g15886 Beta vulgaris HOM05D004534 ORTHO05D005413 1.9e-111 406.8 429 49.2
AUR62009701 Chenopodium quinoa HOM05D004534 ORTHO05D005413 4.0e-109 399.1 349 57.0
CSS0050279 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 3.4e-108 396.0 354 58.5
FAN25G2491 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.7e-107 393.7 386 51.8
Gorai.004G002200 Gossypium raimondii HOM05D004534 ORTHO05D005413 1.9e-106 390.2 321 61.7
Sc06g0008140 Simmondsia chinensis HOM05D004534 ORTHO05D005413 1.2e-105 387.5 386 50.3
AUR62036245 Chenopodium quinoa HOM05D004534 ORTHO05D005413 3.0e-104 382.9 379 52.5
Gohir.A05G298800 Gossypium hirsutum HOM05D004534 ORTHO05D005413 1.1e-101 374.4 274 65.0
Lj1A180G32 Lonicera japonica HOM05D004534 ORTHO05D005413 1.2e-100 370.9 313 58.1
Oeu051854.2 Olea europaea HOM05D004534 ORTHO05D005413 1.2e-100 370.9 419 47.3
FvH4_7g20500 Fragaria vesca HOM05D004534 ORTHO05D005413 7.1e-98 361.7 231 74.5
TAR633G1279 Trochodendron aralioides HOM05D004534 ORTHO05D005413 3.6e-94 349.4 264 64.8
FAN16G0790 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.1e-93 347.8 382 48.7
AUR62036013 Chenopodium quinoa HOM05D004534 ORTHO05D005413 4.0e-93 345.9 363 50.1
Sed0004393 Sechium edule HOM05D004534 ORTHO05D005413 6.8e-93 345.1 349 53.0
Mapoly0029s0123 Marchantia polymorpha HOM05D004534 ORTHO05D005413 1.7e-91 340.5 353 49.0
CiPaw.13G104100 Carya illinoinensis HOM05D004534 ORTHO05D005413 6.0e-89 332.0 265 63.0
Pp3c16_8740 Physcomitrium patens HOM05D004534 ORTHO05D005413 1.2e-86 324.3 368 45.7
Prupe.6G090300 Prunus persica HOM05D004534 ORTHO05D005413 4.0e-85 319.3 242 63.2
Carub.0005s1159 Capsella rubella HOM05D004534 ORTHO05D005413 1.0e-80 304.7 242 59.9
SMO118G0317 Selaginella moellendorffii HOM05D004534 ORTHO05D005413 1.7e-80 303.9 350 47.1
COL.COLO4_18394 Corchorus olitorius HOM05D004534 ORTHO05D005413 3.9e-80 302.8 309 51.1
SGA_v2.0_scaffold61G21215 Striga asiatica HOM05D004534 ORTHO05D005413 5.6e-79 298.9 250 58.0
Cc09_g02390 Coffea canephora HOM05D004534 ORTHO05D005413 3.6e-78 296.2 191 73.3
Ciclev10032311m.g Citrus clementina HOM05D004534 ORTHO05D005413 9.9e-76 288.1 287 56.4
ClCG09G020370 Citrullus lanatus HOM05D004534 ORTHO05D005413 4.2e-74 282.7 355 44.5
FAN10G0821 Fragaria x ananassa HOM05D004534 ORTHO05D005413 5.1e-72 275.8 354 46.0
Sopen06g031920 Solanum pennellii HOM05D004534 ORTHO05D005413 1.9e-71 273.9 212 63.7
MBI18_g24932_MAGBIO Magnolia biondii HOM05D004534 ORTHO05D005413 9.0e-69 265.0 536 34.3
CBR_g24062 Chara braunii HOM05D004534 ORTHO05D005413 1.6e-57 227.6 303 41.3
Cpa.g.sc1.278 Carica papaya HOM05D004534 ORTHO05D005413 3.7e-54 216.5 267 44.6
AagrBONN_evm.TU.Sc2ySwM_228.5090 Anthoceros agrestis HOM05D004534 ORTHO05D005413 5.0e-51 206.1 195 48.7
Nitab4.5_0000830g0060 Nicotiana tabacum HOM05D004534 ORTHO05D005413 9.1e-45 185.3 175 56.6
Cc09_g02400 Coffea canephora HOM05D004534 ORTHO05D005413 3.8e-43 179.9 129 72.1
Cfa024137 Carpinus fangiana HOM05D004534 ORTHO05D005413 1.7e-38 164.5 409 31.5
Cre01.g013250 Chlamydomonas reinhardtii HOM05D004534 ORTHO05D005413 7.7e-36 155.6 305 31.1
PRCOL_00005152 Prasinoderma coloniale HOM05D004534 ORTHO05D005413 1.7e-35 154.5 314 31.8
VMungo0464G2039 Vigna mungo HOM05D004534 ORTHO05D005413 1.5e-23 114.8 96 55.2
AUR62035991 Chenopodium quinoa HOM05D004534 ORTHO05D005413 1.3e-22 111.7 121 45.5
Glyma.15G044000 Glycine max HOM05D004534 ORTHO05D005413 6.5e-19 99.4 81 55.6
RcHm_v2.0_Chr1g0364361 Rosa chinensis HOM05D003391 ORTHO05D005413 1.1e-18 98.6 56 76.8
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 1.2e-17 95.1 63 63.5
RcHm_v2.0_Chr5g0046071 Rosa chinensis HOM05D004534 ORTHO05D005413 2.4e-13 80.9 46 73.9
Nitab4.5_0000830g0070 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.7e-11 74.7 43 74.4
Actinidia38238 Actinidia chinensis HOM05D004534 ORTHO05D005413 2.5e-10 70.9 135 35.6
AagrBONN_evm.TU.Sc2ySwM_117.2640 Anthoceros agrestis HOM05D012537 ORTHO05D009535 1.5e-07 61.6 34 70.6


User provided reference genes

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