Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 6.2e-146 520.8 262 100.0
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 2.1e-130 469.2 262 90.1
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 3.4e-128 461.8 261 89.3
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 7.1e-126 454.1 259 86.1
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 3.5e-125 451.8 261 86.6
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 4.6e-125 451.4 259 87.3
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 4.6e-125 451.4 259 86.1
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 7.8e-125 450.7 259 86.5
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 3.0e-124 448.7 259 86.1
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 3.9e-124 448.4 259 85.7
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 6.6e-124 447.6 259 84.9
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.5e-123 446.4 259 85.3
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 2.5e-123 445.7 259 85.7
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 3.3e-123 445.3 255 86.7
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 1.6e-122 443.0 259 85.3
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 1.6e-122 443.0 259 86.9
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 2.1e-122 442.6 259 84.2
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 2.1e-122 442.6 261 85.4
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 2.8e-122 442.2 261 83.5
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 4.8e-122 441.4 260 85.4
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 1.8e-121 439.5 259 85.3
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 6.9e-121 437.6 259 83.0
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 2.0e-120 436.0 262 83.6
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 2.6e-120 435.6 259 84.6
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 2.6e-120 435.6 254 85.4
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 3.4e-120 435.3 259 83.0
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 3.4e-120 435.3 259 83.8
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 5.8e-120 434.5 259 83.8
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 9.9e-120 433.7 259 84.6
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.3e-119 433.3 259 83.4
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.9e-119 432.2 259 82.6
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 2.9e-119 432.2 250 85.6
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.4e-118 429.9 259 82.2
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 1.4e-118 429.9 259 84.6
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.4e-118 429.1 259 83.4
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.2e-118 428.3 261 82.4
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 4.2e-118 428.3 259 83.0
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 9.3e-118 427.2 261 82.0
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 1.2e-117 426.8 259 81.9
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 1.6e-117 426.4 259 82.6
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 2.1e-117 426.0 262 81.3
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.7e-117 425.6 261 81.2
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.7e-117 425.6 261 81.6
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 4.6e-117 424.9 260 82.3
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 4.6e-117 424.9 261 81.2
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 7.9e-117 424.1 261 81.6
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.0e-116 423.7 259 83.0
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 1.3e-116 423.3 260 81.9
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 1.8e-116 422.9 259 82.6
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.3e-116 422.5 250 83.2
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 2.3e-116 422.5 259 82.2
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 3.0e-116 422.2 261 81.2
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 3.9e-116 421.8 255 84.3
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 6.7e-116 421.0 260 81.9
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 8.7e-116 420.6 259 81.5
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 8.7e-116 420.6 259 80.7
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.1e-115 420.2 261 80.5
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 1.1e-115 420.2 261 83.1
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 1.9e-115 419.5 259 80.7
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 1.9e-115 419.5 266 80.8
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 1.9e-115 419.5 259 80.7
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 3.3e-115 418.7 261 82.8
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 3.3e-115 418.7 259 81.1
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 4.3e-115 418.3 249 83.9
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 5.6e-115 417.9 259 81.1
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 7.4e-115 417.5 257 81.3
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 1.3e-114 416.8 254 80.7
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 1.6e-114 416.4 267 80.9
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 2.1e-114 416.0 258 80.6
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 2.8e-114 415.6 259 81.9
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 4.8e-114 414.8 262 82.4
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 1.1e-113 413.7 260 81.2
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 2.4e-113 412.5 257 82.5
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 4.0e-113 411.8 259 79.5
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.5e-112 409.8 251 81.3
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 3.4e-112 408.7 256 81.2
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 5.8e-112 407.9 250 81.2
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 2.9e-111 405.6 259 78.4
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 2.9e-111 405.6 300 71.0
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 3.8e-111 405.2 259 78.8
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 3.8e-111 405.2 259 80.7
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 3.8e-111 405.2 259 77.6
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 3.8e-111 405.2 260 79.6
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 4.9e-111 404.8 283 73.9
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 4.9e-111 404.8 259 79.9
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 4.9e-111 404.8 259 79.2
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 2.5e-110 402.5 260 80.0
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 5.5e-110 401.4 259 78.8
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 5.5e-110 401.4 259 79.5
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 1.2e-109 400.2 259 79.2
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.2e-109 400.2 260 78.5
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.8e-108 396.4 257 80.2
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 3.9e-108 395.2 259 77.6
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 5.6e-107 391.3 284 73.6
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 7.4e-107 391.0 261 76.2
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 1.6e-106 389.8 261 76.6
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 2.1e-106 389.4 263 76.0
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 1.1e-105 387.1 259 77.2
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 1.8e-105 386.3 252 78.2
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 2.4e-105 386.0 255 77.6
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 2.4e-105 386.0 252 77.8
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 4.0e-105 385.2 260 74.6
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 9.0e-105 384.0 276 72.5
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 5.8e-104 381.3 230 81.3
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 7.6e-104 380.9 250 76.8
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 1.0e-103 380.6 262 75.6
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 4.9e-103 378.3 312 66.0
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 9.3e-102 374.0 256 75.0
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 6.0e-101 371.3 257 73.2
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 6.0e-101 371.3 257 73.2
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 8.7e-100 367.5 259 72.6
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 2.5e-99 365.9 259 73.0
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 2.5e-99 365.9 259 73.0
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 5.7e-99 364.8 259 74.1
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 2.8e-98 362.5 235 78.3
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 3.7e-98 362.1 259 72.6
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 3.7e-98 362.1 261 72.0
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 8.2e-98 360.9 259 72.2
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.1e-97 360.5 259 72.2
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 1.4e-97 360.1 259 71.4
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 1.4e-97 360.1 259 71.4
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 1.8e-97 359.8 260 71.2
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 2.4e-97 359.4 259 71.8
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 9.0e-97 357.5 257 71.6
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 1.2e-96 357.1 253 73.1
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 1.5e-96 356.7 267 71.2
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 5.9e-96 354.8 260 70.0
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 7.7e-96 354.4 259 71.0
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 1.7e-95 353.2 260 71.2
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 5.0e-95 351.7 257 71.2
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 1.1e-94 350.5 259 70.7
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 1.1e-94 350.5 278 67.6
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.1e-94 350.5 227 78.9
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 2.5e-94 349.4 259 70.3
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 3.2e-94 349.0 199 87.9
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 3.2e-94 349.0 257 71.2
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 5.5e-94 348.2 259 71.0
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 4.6e-93 345.1 259 71.4
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 9.7e-91 337.4 259 68.0
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 6.3e-90 334.7 260 67.3
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 3.8e-87 325.5 206 80.6
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 1.4e-86 323.6 259 66.0
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 2.5e-86 322.8 198 81.3
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 6.1e-85 318.2 259 65.3
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 6.7e-84 314.7 260 64.6
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 8.2e-82 307.8 260 63.8
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 1.2e-80 303.9 260 63.5
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.2e-80 303.9 241 68.0
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 3.8e-79 298.9 259 61.4
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 3.3e-75 285.8 190 75.8
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 5.0e-71 271.9 144 91.0
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 8.3e-66 254.6 168 75.6
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 2.2e-42 176.8 213 50.7
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 9.2e-41 171.4 262 40.8
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 1.3e-39 167.5 148 58.1
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.8e-36 157.1 240 42.1
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.1e-33 147.9 115 67.0
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 1.1e-33 147.9 107 70.1
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 3.3e-30 136.3 93 73.1
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 9.5e-30 134.8 74 91.9
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 8.3e-26 121.7 231 39.4
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 8.3e-26 121.7 76 80.3
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 2.6e-19 100.1 174 39.1
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 1.6e-16 90.9 124 39.5
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.9e-14 84.0 77 57.1
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 4.0e-12 76.3 40 80.0
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.5e-11 74.3 40 82.5
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 4.4e-11 72.8 40 80.0
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 7.6e-11 72.0 43 72.1
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 9.9e-11 71.6 120 43.3
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 1.2e-08 64.7 136 33.1
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 2.3e-07 60.5 86 33.7
Sabra18G0026300 Salix brachista HOM05D002732 ORTHO05D002955 3.3e-06 56.6 32 87.5


User provided reference genes

Program Settings