Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 0.0e+00 2090.1 1078 100.0
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 0.0e+00 1807.7 1075 86.3
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 0.0e+00 1741.9 1103 83.0
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1703.0 1075 82.9
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 0.0e+00 1681.0 1080 80.0
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 0.0e+00 1669.8 1080 79.9
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 0.0e+00 1633.6 1084 78.0
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1619.8 1076 77.2
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 0.0e+00 1611.7 1076 77.6
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 0.0e+00 1610.1 1077 77.2
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 0.0e+00 1607.8 1078 77.6
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 0.0e+00 1599.7 1080 76.9
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1593.9 1076 77.0
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1592.4 1076 76.3
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 0.0e+00 1591.6 1080 76.8
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1586.2 1076 76.1
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 0.0e+00 1583.9 1076 76.3
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 0.0e+00 1581.2 1081 75.2
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1578.1 1080 75.4
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 0.0e+00 1576.2 1080 75.8
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 0.0e+00 1573.1 1076 75.7
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 0.0e+00 1573.1 1081 75.7
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 0.0e+00 1572.8 1076 75.0
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 0.0e+00 1570.4 1076 75.4
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 0.0e+00 1567.7 1081 75.9
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1544.6 1080 75.1
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1543.5 1076 74.3
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1543.5 1080 75.4
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1543.1 1163 71.6
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1537.7 1081 73.9
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1537.3 1076 74.3
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 0.0e+00 1535.4 1076 74.0
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 0.0e+00 1533.5 1079 75.3
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1531.2 1076 74.2
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 0.0e+00 1529.2 1051 75.7
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1526.5 1081 73.5
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1525.8 1035 76.6
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 0.0e+00 1521.1 1076 73.0
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 0.0e+00 1521.1 1075 72.6
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 0.0e+00 1519.2 1090 73.4
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1518.8 1088 73.2
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 0.0e+00 1512.7 1076 73.2
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1508.4 947 83.0
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1505.0 1077 72.7
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1503.8 1082 72.6
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1503.0 1104 72.6
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 0.0e+00 1501.5 1083 73.2
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 0.0e+00 1495.7 1076 72.0
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1493.8 1082 72.7
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1493.0 1076 72.9
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1491.5 1076 72.0
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1490.7 1076 72.8
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 0.0e+00 1489.9 1082 72.5
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 0.0e+00 1481.5 1080 72.0
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 0.0e+00 1474.5 1256 66.9
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 0.0e+00 1469.1 1080 71.0
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 0.0e+00 1456.0 1080 71.0
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 0.0e+00 1448.0 1080 69.9
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1443.3 1077 69.8
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 0.0e+00 1442.9 1079 69.9
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 0.0e+00 1442.2 1080 69.6
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 0.0e+00 1440.6 1080 69.7
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1433.7 1077 69.7
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1431.8 1078 69.5
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 0.0e+00 1427.9 1001 74.3
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 0.0e+00 1423.7 1076 70.9
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 0.0e+00 1421.0 1080 68.8
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 0.0e+00 1416.4 1093 68.2
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1413.3 1096 68.2
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1412.9 1096 68.2
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 0.0e+00 1410.2 1081 68.0
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1408.3 1081 68.5
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1399.4 1100 66.9
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1397.5 1115 66.7
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1393.6 1077 68.0
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1390.6 1115 66.1
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1389.8 1143 67.4
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1375.5 1068 67.9
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1375.5 1080 67.8
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1371.7 1179 64.7
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1370.9 1064 67.8
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1368.2 1100 65.8
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1367.1 1100 66.2
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 0.0e+00 1360.5 992 71.3
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 0.0e+00 1359.4 1156 65.9
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1349.7 1080 66.5
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1345.5 1100 65.5
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1344.7 1076 67.0
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 0.0e+00 1340.5 1081 66.4
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1332.8 1106 65.1
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1330.5 1093 65.9
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 0.0e+00 1329.7 1087 66.7
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 0.0e+00 1322.0 1104 63.4
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1318.9 1115 64.8
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 0.0e+00 1317.8 1081 67.3
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 0.0e+00 1313.9 1046 67.1
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 0.0e+00 1306.2 1074 63.7
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 0.0e+00 1302.0 1028 67.1
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 0.0e+00 1300.0 1067 63.4
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 0.0e+00 1299.6 1074 64.4
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1268.8 1181 61.8
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1267.3 1069 64.1
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1227.2 1063 63.0
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 0.0e+00 1209.9 882 72.2
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 0.0e+00 1169.8 1069 61.4
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 0.0e+00 1167.9 744 80.1
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 0.0e+00 1166.8 907 67.3
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 2.3e-308 1062.4 916 64.2
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 8.9e-300 1033.9 1086 53.0
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 6.2e-293 1011.1 1095 51.5
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 4.3e-286 988.4 744 70.3
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 1.1e-284 983.8 979 58.5
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 4.2e-273 945.3 847 63.5
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 9.0e-268 927.5 633 77.3
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.2e-264 917.1 1098 48.0
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 9.3e-257 891.0 1086 47.1
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 4.2e-249 865.5 1060 46.9
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 2.0e-235 820.1 778 60.7
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 1.1e-220 771.2 516 77.1
COL.COLO4_34215 Corchorus olitorius HOM05D003976 ORTHO05D004711 1.6e-211 740.7 572 68.5
Peaxi162Scf00145g01214 Petunia axillaris HOM05D003976 ORTHO05D004711 1.9e-209 733.8 566 70.0
BraA05t22668Z Brassica rapa HOM05D003976 ORTHO05D004711 1.8e-207 727.2 566 67.1
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 6.0e-195 685.6 707 55.7
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 4.7e-192 676.0 842 49.0
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 4.4e-190 669.5 809 48.8
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea HOM05D003976 ORTHO05D004711 4.9e-189 666.0 587 62.0
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 2.4e-188 663.7 533 69.0
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 3.5e-187 659.8 1228 35.3
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 4.3e-169 599.7 431 72.2
CAN.G321.62 Capsicum annuum HOM05D003976 ORTHO05D004711 2.4e-164 583.9 416 73.8
CiPaw.02G172100 Carya illinoinensis HOM05D003976 ORTHO05D004711 9.3e-148 528.9 376 72.6
CDE10G0060 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.1e-135 488.8 426 61.5
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 4.1e-135 486.9 349 73.1
Rhsim03G0115800 Rhododendron simsii HOM05D003976 ORTHO05D004711 4.2e-132 476.9 359 71.6
vmacro00383 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 2.5e-124 451.1 362 68.2
Cpa.g.sc53.132 Carica papaya HOM05D003976 ORTHO05D004711 1.6e-115 421.8 323 70.6
Cpa.g.sc53.134 Carica papaya HOM05D003976 ORTHO05D004711 1.9e-108 398.3 353 61.8
QL08p054329 Quercus lobata HOM05D003976 ORTHO05D004711 6.1e-107 393.3 274 78.1
Lalb_Chr21g0313551 Lupinus albus HOM05D003976 ORTHO05D004711 1.0e-106 392.5 282 73.0
CDE10G0443 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.5e-92 345.5 371 52.6
Cc02_g10920 Coffea canephora HOM05D003976 ORTHO05D004711 4.7e-91 340.5 224 76.8
BcaNung07314 Brassica carinata HOM05D003976 ORTHO05D004711 1.1e-79 302.8 178 82.6
VMungo0720G2709 Vigna mungo HOM05D003976 ORTHO05D004711 4.0e-66 257.7 175 76.0
HPP92_026132 Vanilla planifolia HOM05D003976 ORTHO05D004711 8.1e-59 233.4 142 78.9
ATR0730G060 Amborella trichopoda HOM05D003976 ORTHO05D004711 4.9e-56 224.2 139 79.1
CDE10G0301 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.9e-55 222.2 161 70.2
PSO478G0690 Papaver somniferum HOM05D003976 ORTHO05D004711 9.6e-52 209.9 129 82.2
vmacro00384 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.5e-49 202.6 108 90.7
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 3.8e-48 198.0 139 68.3
TPR.G33031 Trifolium pratense HOM05D003976 ORTHO05D004711 8.4e-40 170.2 115 71.3
Actinidia18608 Actinidia chinensis HOM05D003976 ORTHO05D004711 9.6e-36 156.8 85 85.9
vmacro00385 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.4e-34 152.9 88 87.5
AL491U10010 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 3.8e-32 144.8 103 70.9
Lsat_1_v5_gn_4_4660 Lactuca sativa HOM05D003976 ORTHO05D004711 3.8e-32 144.8 165 49.7
CAN.G796.1 Capsicum annuum HOM05D003976 ORTHO05D004711 8.4e-32 143.7 181 47.0
Cc02_g10910 Coffea canephora HOM05D003976 ORTHO05D004711 3.2e-31 141.7 111 68.5
Gohir.D10G210566 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.2e-30 139.8 87 74.7
Psat7g009440 Pisum sativum HOM05D003976 ORTHO05D004711 2.7e-30 138.7 86 74.4
Lj6g0023100 Lotus japonicus HOM05D003976 ORTHO05D004711 1.5e-28 132.9 105 60.0
Cre01.g003050 Chlamydomonas reinhardtii HOM05D003976 ORTHO05D004711 2.5e-28 132.1 203 34.5
Lsat_1_v5_gn_9_29220 Lactuca sativa HOM05D003976 ORTHO05D006024 2.5e-28 132.1 86 70.9
SHI08886 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-27 129.8 92 71.7
Hma1.2p1_0384F.1_g140740 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 1.8e-26 125.9 87 78.2
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-26 124.8 251 35.5
TPR.G28835 Trifolium pratense HOM05D003976 ORTHO05D004711 5.3e-26 124.4 79 70.9
Cc06_g17220 Coffea canephora HOM05D003976 ORTHO05D004711 6.7e-21 107.5 81 64.2
Prupe.5G231200 Prunus persica HOM05D003976 ORTHO05D004711 4.8e-19 101.3 100 57.0
Lsat_1_v5_gn_6_63420 Lactuca sativa HOM05D003976 ORTHO05D004711 4.2e-15 88.2 71 62.0
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 4.2e-15 88.2 62 71.0
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 4.2e-15 88.2 62 71.0
Lalb_Chr21g0313561 Lupinus albus HOM05D003976 ORTHO05D004711 3.0e-13 82.0 84 54.8
Lalb_Chr21g0313691 Lupinus albus HOM05D003976 ORTHO05D004711 3.0e-13 82.0 84 54.8
Hma1.2p1_0384F.1_g140760 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 1.5e-12 79.7 49 77.6
Cc03_g09730 Coffea canephora HOM05D003976 ORTHO05D004711 2.2e-11 75.9 56 67.9
Aa31LG6G7350 Aethionema arabicum HOM05D003976 ORTHO05D004711 8.2e-11 73.9 68 60.3
HanXRQChr05g0134171 Helianthus annuus HOM05D003976 ORTHO05D004711 1.8e-10 72.8 52 75.0
TPR.G6473 Trifolium pratense HOM05D003976 ORTHO05D004711 4.5e-09 68.2 48 66.7
MBI18_g27470_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 4.2e-07 61.6 52 51.9


User provided reference genes

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