Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01888 Erythranthe guttata HOM05D002608 ORTHO05D189641 1.0e-51 206.5 102 100.0
Migut.F01887 Erythranthe guttata HOM05D002608 ORTHO05D003838 1.7e-22 109.4 117 56.4
SalBow6G5981 Salvia bowleyana HOM05D002608 ORTHO05D003838 2.2e-14 82.4 115 43.5
Migut.H01296 Erythranthe guttata HOM05D002608 ORTHO05D003838 6.4e-14 80.9 115 43.5
MSTRG.18039 Avicennia marina HOM05D002608 ORTHO05D003838 1.1e-13 80.1 115 41.7
Oeu036171.1 Olea europaea HOM05D002608 ORTHO05D021346 2.4e-13 79.0 115 42.6
Oeu049216.1 Olea europaea HOM05D002608 ORTHO05D003838 2.4e-13 79.0 115 42.6
SGA_v2.0_scaffold92G28161 Striga asiatica HOM05D002608 ORTHO05D003838 2.7e-12 75.5 115 39.1
SGA_v2.0_scaffold92G28166 Striga asiatica HOM05D002608 ORTHO05D003838 2.7e-12 75.5 115 39.1
unitig_899.g15197 Utricularia gibba HOM05D002608 ORTHO05D003838 1.0e-11 73.6 115 40.9
Solyc10g084670.3 Solanum lycopersicum HOM05D002608 ORTHO05D003838 8.6e-11 70.5 115 37.4
Sopen10g034110 Solanum pennellii HOM05D002608 ORTHO05D003838 8.6e-11 70.5 115 37.4
PGSC0003DMG400010999 Solanum tuberosum HOM05D002608 ORTHO05D003838 8.6e-11 70.5 115 37.4
Peaxi162Scf01194g00134 Petunia axillaris HOM05D002608 ORTHO05D003838 4.3e-10 68.2 115 36.5
Cfa006672 Carpinus fangiana HOM05D002608 ORTHO05D003838 5.6e-10 67.8 115 37.4
Haze_04099 Corylus avellana HOM05D002608 ORTHO05D003838 5.6e-10 67.8 119 37.0
Hma1.2p1_0472F.1_g159760 Hydrangea macrophylla HOM05D002608 ORTHO05D003838 7.3e-10 67.4 115 35.7
CiPaw.07G025500 Carya illinoinensis HOM05D002608 ORTHO05D003838 1.2e-09 66.6 115 36.5
DCAR_003377 Daucus carota HOM05D002608 ORTHO05D003838 1.2e-09 66.6 119 37.8
HanXRQChr14g0452151 Helianthus annuus HOM05D002608 ORTHO05D003838 1.2e-09 66.6 115 36.5
ECA234G4518 Erigeron canadensis HOM05D002608 ORTHO05D003031 1.6e-09 66.2 115 37.4
ECA240G3079 Erigeron canadensis HOM05D002608 ORTHO05D003838 1.6e-09 66.2 115 35.7
Lsat_1_v5_gn_7_67461 Lactuca sativa HOM05D002608 ORTHO05D003838 1.6e-09 66.2 115 35.7
ECA247G1225 Erigeron canadensis HOM05D002608 ORTHO05D003838 2.1e-09 65.9 115 35.7
Atru.chr2.118 Acer truncatum HOM05D002608 ORTHO05D003838 3.6e-09 65.1 119 37.8
DCAR_022132 Daucus carota HOM05D002608 ORTHO05D003838 3.6e-09 65.1 115 35.7
HanXRQChr09g0247971 Helianthus annuus HOM05D002608 ORTHO05D003838 3.6e-09 65.1 115 35.7
Lalb_Chr01g0019231 Lupinus albus HOM05D002608 ORTHO05D003838 4.7e-09 64.7 115 37.4
QL03p017837 Quercus lobata HOM05D002608 ORTHO05D003838 4.7e-09 64.7 115 36.5
QL93p2009_0049 Quercus lobata HOM05D002608 ORTHO05D003838 4.7e-09 64.7 115 36.5
Lj2A99G56 Lonicera japonica HOM05D002608 ORTHO05D003838 6.2e-09 64.3 115 35.7
Nitab4.5_0000202g0170 Nicotiana tabacum HOM05D002608 ORTHO05D003838 6.2e-09 64.3 115 35.7
Actinidia21508 Actinidia chinensis HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 34.8
CSS0020825 Camellia sinensis var. sinensis HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 34.8
CAN.G97.14 Capsicum annuum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
CDE06G2290 Ceratophyllum demersum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 116 37.9
Cc06_g02900 Coffea canephora HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
DCAR_014838 Daucus carota HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
Nitab4.5_0000216g0080 Nicotiana tabacum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
Nitab4.5_0002077g0030 Nicotiana tabacum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
Nitab4.5_0003267g0030 Nicotiana tabacum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
PSO170G1119 Papaver somniferum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 36.5
PSO170G4769 Papaver somniferum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 36.5
PSO528G0014 Papaver somniferum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 36.5
Peaxi162Scf00039g01224 Petunia axillaris HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
Rhsim05G0135800 Rhododendron simsii HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 34.8
Solyc09g010460.3 Solanum lycopersicum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
Sopen09g005200 Solanum pennellii HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
PGSC0003DMG400008926 Solanum tuberosum HOM05D002608 ORTHO05D003838 8.0e-09 63.9 115 35.7
Ah.04g154240 Amaranthus hybridus HOM05D002608 ORTHO05D003838 1.1e-08 63.5 115 33.9
AUR62026623 Chenopodium quinoa HOM05D002608 ORTHO05D003838 1.1e-08 63.5 116 35.3
Gorai.007G300600 Gossypium raimondii HOM05D002608 ORTHO05D003838 1.1e-08 63.5 115 34.8
Lalb_Chr20g0113231 Lupinus albus HOM05D002608 ORTHO05D003838 1.1e-08 63.5 116 38.8
PSO357G0420 Papaver somniferum HOM05D002608 ORTHO05D003838 1.1e-08 63.5 115 36.5
EL10Ac4g09869 Beta vulgaris HOM05D002608 ORTHO05D003838 1.4e-08 63.2 115 34.8
AUR62034877 Chenopodium quinoa HOM05D002608 ORTHO05D003838 1.4e-08 63.2 116 35.3
Manes.08G114400 Manihot esculenta HOM05D002608 ORTHO05D003838 1.4e-08 63.2 115 35.7
Manes.09G174300 Manihot esculenta HOM05D002608 ORTHO05D003838 1.4e-08 63.2 115 35.7
Hund12489 Selenicereus undatus HOM05D002608 ORTHO05D003838 1.4e-08 63.2 115 34.8
TWI56G0709 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 1.4e-08 63.2 115 35.7
Carub.0006s3036 Capsella rubella HOM05D002608 ORTHO05D003838 1.8e-08 62.8 117 35.0
CARHR255150 Cardamine hirsuta HOM05D002608 ORTHO05D003838 1.8e-08 62.8 115 35.7
FAN02G0527 Fragaria x ananassa HOM05D002608 ORTHO05D003838 1.8e-08 62.8 115 36.5
Gohir.D11G278500 Gossypium hirsutum HOM05D002608 ORTHO05D003838 1.8e-08 62.8 115 34.8
Hma1.2p1_1441F.1_g283600 Hydrangea macrophylla HOM05D002608 ORTHO05D003838 1.8e-08 62.8 115 33.9
Lsat_1_v5_gn_9_123961 Lactuca sativa HOM05D002608 ORTHO05D003838 1.8e-08 62.8 120 36.7
MBI17_g38311_MAGBIO Magnolia biondii HOM05D002608 ORTHO05D003838 1.8e-08 62.8 115 34.8
MBI17_g38313_MAGBIO Magnolia biondii HOM05D002608 ORTHO05D003838 1.8e-08 62.8 115 34.8
THA.LOC104814584 Tarenaya hassleriana HOM05D002608 ORTHO05D003838 1.8e-08 62.8 115 36.5
ATR0057G045 Amborella trichopoda HOM05D002608 ORTHO05D003838 2.3e-08 62.4 115 34.8
CDE07G0225 Ceratophyllum demersum HOM05D002608 ORTHO05D003838 2.3e-08 62.4 116 37.1
BcaB01g01651 Brassica carinata HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 35.7
BcaC04g21147 Brassica carinata HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 35.7
A09p27650 Brassica napus HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 35.7
C09p35000 Brassica napus HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 35.7
BolC9t56346H Brassica oleracea HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 35.7
BraA09t38334Z Brassica rapa HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 35.7
Cpa.g.sc48.127 Carica papaya HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 34.8
Dinv05264 Davidia involucrata HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 33.9
Lsat_1_v5_gn_1_55601 Lactuca sativa HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 36.5
MD04G1196800 Malus domestica HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 36.5
MCO15G442 Micromonas commoda HOM05D002608 ORTHO05D003838 3.1e-08 62.0 120 33.3
Sc02g0009020 Simmondsia chinensis HOM05D002608 ORTHO05D003838 3.1e-08 62.0 115 33.9
Aa31LG6G6570 Aethionema arabicum HOM05D002608 ORTHO05D003838 4.0e-08 61.6 115 35.7
AL6G45870 Arabidopsis lyrata HOM05D002608 ORTHO05D003838 4.0e-08 61.6 115 35.7
AUR62000719 Chenopodium quinoa HOM05D002608 ORTHO05D003838 4.0e-08 61.6 116 36.2
AUR62005245 Chenopodium quinoa HOM05D002608 ORTHO05D003838 4.0e-08 61.6 116 36.2
Dinv24411 Davidia involucrata HOM05D002608 ORTHO05D003838 4.0e-08 61.6 115 33.9
TWI36G0315 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 4.0e-08 61.6 115 35.7
Aa31LG9G10810 Aethionema arabicum HOM05D002608 ORTHO05D003838 5.2e-08 61.2 115 35.7
BcaB01g02695 Brassica carinata HOM05D002608 ORTHO05D003838 5.2e-08 61.2 116 34.5
BcaC01g04630 Brassica carinata HOM05D002608 ORTHO05D003838 5.2e-08 61.2 116 34.5
A03p29350 Brassica napus HOM05D002608 ORTHO05D003838 5.2e-08 61.2 116 34.5
C03p35460 Brassica napus HOM05D002608 ORTHO05D003838 5.2e-08 61.2 116 34.5
BolC3t15861H Brassica oleracea HOM05D002608 ORTHO05D003838 5.2e-08 61.2 116 34.5
BraA03t12132Z Brassica rapa HOM05D002608 ORTHO05D003838 5.2e-08 61.2 116 34.5
Gohir.A08G207600 Gossypium hirsutum HOM05D002608 ORTHO05D003838 5.2e-08 61.2 115 34.8
Gohir.D08G224200 Gossypium hirsutum HOM05D002608 ORTHO05D003838 5.2e-08 61.2 115 34.8
Gorai.004G238100 Gossypium raimondii HOM05D002608 ORTHO05D003838 5.2e-08 61.2 115 34.8
Nn2g12763 Nelumbo nucifera HOM05D002608 ORTHO05D003838 5.2e-08 61.2 115 33.9
TAR365G0313 Trochodendron aralioides HOM05D002608 ORTHO05D003838 5.2e-08 61.2 115 33.9
TAR374G0864 Trochodendron aralioides HOM05D002608 ORTHO05D003838 5.2e-08 61.2 115 33.9
GSVIVG01031192001 Vitis vinifera HOM05D002608 ORTHO05D003838 5.2e-08 61.2 115 34.8
CBR_g29275 Chara braunii HOM05D002608 ORTHO05D003838 6.8e-08 60.8 119 34.5
FvH4_6g07021 Fragaria vesca HOM05D002608 ORTHO05D003838 6.8e-08 60.8 115 35.7
FAN05G0606 Fragaria x ananassa HOM05D002608 ORTHO05D003838 6.8e-08 60.8 115 35.7
FAN14G0019 Fragaria x ananassa HOM05D002608 ORTHO05D003838 6.8e-08 60.8 115 35.7
MD12G1209700 Malus domestica HOM05D002608 ORTHO05D003838 6.8e-08 60.8 115 35.7
RcHm_v2.0_Chr3g0456551 Rosa chinensis HOM05D002608 ORTHO05D003838 6.8e-08 60.8 115 35.7
AT4G11420 Arabidopsis thaliana HOM05D002608 ORTHO05D003838 8.9e-08 60.5 115 34.8
BcaB05g23828 Brassica carinata HOM05D002608 ORTHO05D003838 8.9e-08 60.5 115 34.8
BcaC03g16352 Brassica carinata HOM05D002608 ORTHO05D003838 8.9e-08 60.5 115 34.8
C02p41770 Brassica napus HOM05D002608 ORTHO05D003838 8.9e-08 60.5 115 34.8
BolC2t10192H Brassica oleracea HOM05D002608 ORTHO05D003838 8.9e-08 60.5 115 34.8
Dinv30849 Davidia involucrata HOM05D002608 ORTHO05D003838 8.9e-08 60.5 115 33.0
Thhalv10028395m.g Eutrema salsugineum HOM05D002608 ORTHO05D003838 8.9e-08 60.5 119 35.3
Prupe.6G317100 Prunus persica HOM05D002608 ORTHO05D003838 8.9e-08 60.5 119 36.1
Sp6g06010 Schrenkiella parvula HOM05D002608 ORTHO05D003838 8.9e-08 60.5 115 34.8
TWI12G0370 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 8.9e-08 60.5 115 33.9
TAR383G0809 Trochodendron aralioides HOM05D002608 ORTHO05D003838 8.9e-08 60.5 109 34.9
A02p26260 Brassica napus HOM05D002608 ORTHO05D003838 1.2e-07 60.1 116 33.6
BraA02t07627Z Brassica rapa HOM05D002608 ORTHO05D003838 1.2e-07 60.1 116 33.6
CANSAT56G4271 Cannabis sativa HOM05D002608 ORTHO05D003838 1.2e-07 60.1 115 33.9
COL.COLO4_03801 Corchorus olitorius HOM05D002608 ORTHO05D003838 1.2e-07 60.1 115 33.9
Duzib177G0789 Durio zibethinus HOM05D002608 ORTHO05D003838 1.2e-07 60.1 115 33.9
Glyma.03G172200 Glycine max HOM05D002608 ORTHO05D003838 1.2e-07 60.1 115 34.8
Glyma.19G173100 Glycine max HOM05D002608 ORTHO05D003838 1.2e-07 60.1 115 34.8
Thecc.05G318700 Theobroma cacao HOM05D002608 ORTHO05D003838 1.2e-07 60.1 115 33.9
TPR.G21472 Trifolium pratense HOM05D002608 ORTHO05D005666 1.2e-07 60.1 116 37.1
arahy.Tifrunner.gnm1.ann1.6UH7HR Arachis hypogaea HOM05D002608 ORTHO05D003838 1.5e-07 59.7 115 34.8
arahy.Tifrunner.gnm1.ann1.PFNK2V Arachis hypogaea HOM05D002608 ORTHO05D003838 1.5e-07 59.7 115 34.8
Ca_08783_v3 Cicer arietinum L. HOM05D002608 ORTHO05D003838 1.5e-07 59.7 115 34.8
Mapoly0080s0038 Marchantia polymorpha HOM05D002608 ORTHO05D003838 1.5e-07 59.7 113 31.9
Medtr7g099920 Medicago truncatula HOM05D002608 ORTHO05D003838 1.5e-07 59.7 115 34.8
Phvul.001G169900 Phaseolus vulgaris HOM05D002608 ORTHO05D003838 1.5e-07 59.7 115 34.8
Psat3g048960 Pisum sativum HOM05D002608 ORTHO05D003838 1.5e-07 59.7 115 34.8
PGR142G3882 Punica granatum HOM05D002608 ORTHO05D003838 1.5e-07 59.7 115 34.8
VMungo1383G2288 Vigna mungo HOM05D002608 ORTHO05D003838 1.5e-07 59.7 115 34.8
Thhalv10026980m.g Eutrema salsugineum HOM05D002608 ORTHO05D003838 2.0e-07 59.3 113 36.3
Lj1g0021618 Lotus japonicus HOM05D002608 ORTHO05D003838 2.0e-07 59.3 115 34.8
SEGI_12975 Sequoiadendron giganteum HOM05D002608 ORTHO05D003838 2.0e-07 59.3 112 33.0
SEGI_14379 Sequoiadendron giganteum HOM05D002608 ORTHO05D003838 2.0e-07 59.3 112 33.0
Zm00001eb121480 Zea mays HOM05D002608 ORTHO05D003838 2.0e-07 59.3 115 33.0
Ah.13g074140 Amaranthus hybridus HOM05D002608 ORTHO05D003838 2.6e-07 58.9 115 32.2
Ciclev10000154m.g Citrus clementina HOM05D002608 ORTHO05D003838 2.6e-07 58.9 119 35.3
Potri.005G021400 Populus trichocarpa HOM05D002608 ORTHO05D003838 2.6e-07 58.9 115 33.9
CiPaw.10G143500 Carya illinoinensis HOM05D002608 ORTHO05D003838 3.4e-07 58.5 115 33.9
CsaV3_1G037240 Cucumis sativus L. HOM05D002608 ORTHO05D003838 3.4e-07 58.5 115 33.9
Eucgr.H03271 Eucalyptus grandis HOM05D002608 ORTHO05D003838 3.4e-07 58.5 115 33.9
Potri.013G011900 Populus trichocarpa HOM05D002608 ORTHO05D003838 3.4e-07 58.5 115 33.9
PGR031G1858 Punica granatum HOM05D002608 ORTHO05D003838 3.4e-07 58.5 115 33.9
AagrBONN_evm.TU.Sc2ySwM_362.462 Anthoceros agrestis HOM05D002608 ORTHO05D003838 4.4e-07 58.2 112 31.2
BcaNung03267 Brassica carinata HOM05D002608 ORTHO05D003838 4.4e-07 58.2 113 37.2
BraA03t14483Z Brassica rapa HOM05D002608 ORTHO05D003838 4.4e-07 58.2 113 38.1
MELO3C002819.2 Cucumis melo HOM05D002608 ORTHO05D003838 4.4e-07 58.2 115 33.9
MELO3C002822.2 Cucumis melo HOM05D002608 ORTHO05D003838 4.4e-07 58.2 115 33.9
CsaV3_1G037250 Cucumis sativus L. HOM05D002608 ORTHO05D003838 4.4e-07 58.2 115 33.9
Pp3c26_11290 Physcomitrium patens HOM05D002608 ORTHO05D003838 4.4e-07 58.2 112 32.1
Zm00001eb337210 Zea mays HOM05D002608 ORTHO05D003838 4.4e-07 58.2 115 32.2
Duzib106G0606 Durio zibethinus HOM05D002608 ORTHO05D003838 5.8e-07 57.8 115 33.0
Gohir.A11G268500 Gossypium hirsutum HOM05D002608 ORTHO05D003838 5.8e-07 57.8 115 33.0
Pp3c4_26450 Physcomitrium patens HOM05D002608 ORTHO05D003838 5.8e-07 57.8 112 32.1
SMO358G0707 Selaginella moellendorffii HOM05D002608 ORTHO05D003838 5.8e-07 57.8 112 32.1
BcaNung01455 Brassica carinata HOM05D002608 ORTHO05D003838 7.5e-07 57.4 113 37.2
C07p52590 Brassica napus HOM05D002608 ORTHO05D000101 7.5e-07 57.4 113 37.2
BolC7t45756H Brassica oleracea HOM05D002608 ORTHO05D003838 7.5e-07 57.4 113 37.2
Pp3c3_10600 Physcomitrium patens HOM05D002608 ORTHO05D003838 7.5e-07 57.4 112 32.1
QL05p010646 Quercus lobata HOM05D002608 ORTHO05D003838 7.5e-07 57.4 119 34.5
QL07p047431 Quercus lobata HOM05D002608 ORTHO05D003838 7.5e-07 57.4 119 34.5
Cfa017421 Carpinus fangiana HOM05D002608 ORTHO05D003838 9.8e-07 57.0 115 33.0
ClCG03G006160 Citrullus lanatus HOM05D002608 ORTHO05D003838 9.8e-07 57.0 115 33.0
Haze_20749 Corylus avellana HOM05D002608 ORTHO05D003838 9.8e-07 57.0 115 33.0
Sed0023948 Sechium edule HOM05D002608 ORTHO05D003838 9.8e-07 57.0 115 33.0
Thecc.01G130800 Theobroma cacao HOM05D002608 ORTHO05D003838 9.8e-07 57.0 115 33.0
TPR.G7841 Trifolium pratense HOM05D002608 ORTHO05D003838 9.8e-07 57.0 115 33.9
CiPaw.09G189400 Carya illinoinensis HOM05D002608 ORTHO05D003838 1.3e-06 56.6 115 33.0
Aqoxy7G00914 Aquilegia oxysepala HOM05D002608 ORTHO05D003838 1.7e-06 56.2 115 33.0
ClCG03G006190 Citrullus lanatus HOM05D002608 ORTHO05D003838 1.7e-06 56.2 115 32.2
ClCG03G017600 Citrullus lanatus HOM05D002608 ORTHO05D003838 1.7e-06 56.2 115 32.2
MELO3C035497.2 Cucumis melo HOM05D002608 ORTHO05D003838 2.2e-06 55.8 115 32.2
CsaV3_1G037230 Cucumis sativus L. HOM05D002608 ORTHO05D003838 2.2e-06 55.8 115 32.2
Os01g0120800 Oryza sativa ssp. japonica HOM05D002608 ORTHO05D003838 2.2e-06 55.8 115 31.3
A03p54220 Brassica napus HOM05D002608 ORTHO05D003838 2.9e-06 55.5 113 36.3
SHI15014 Sapria himalayana HOM05D002608 ORTHO05D003838 2.9e-06 55.5 105 34.3


User provided reference genes

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