Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 7.6e-204 714.1 446 100.0
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 1.2e-137 494.2 449 65.9
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 3.6e-113 412.9 433 60.5
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 2.8e-97 360.1 451 52.8
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 2.1e-84 317.4 477 48.2
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 1.0e-83 315.1 442 48.4
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 6.7e-83 312.4 451 45.9
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 5.7e-82 309.3 435 51.0
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 6.3e-81 305.8 435 49.9
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.1e-80 305.1 455 44.8
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 1.1e-80 305.1 437 46.7
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 2.0e-79 300.8 421 46.6
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 2.2e-78 297.4 455 44.2
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 8.5e-78 295.4 451 44.6
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 2.1e-76 290.8 444 45.5
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 3.7e-73 280.0 445 48.1
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 2.4e-72 277.3 447 42.7
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 3.1e-72 276.9 452 43.1
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 4.1e-72 276.6 451 43.9
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 1.5e-71 274.6 453 46.4
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 2.6e-71 273.9 454 41.0
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.2e-70 270.8 442 51.6
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 3.8e-70 270.0 497 39.2
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 3.8e-70 270.0 446 46.2
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 2.5e-69 267.3 458 44.1
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 2.5e-69 267.3 474 42.4
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 4.2e-69 266.5 442 51.4
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 5.5e-69 266.2 436 46.6
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 7.2e-69 265.8 446 46.4
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 3.6e-68 263.5 462 41.3
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 7.9e-68 262.3 493 42.2
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.8e-67 261.2 442 45.7
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.8e-67 261.2 454 44.5
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 2.3e-67 260.8 446 41.0
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 5.1e-67 259.6 436 42.7
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 5.1e-67 259.6 473 40.4
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 1.5e-66 258.1 466 40.3
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 9.7e-66 255.4 452 44.0
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 1.7e-65 254.6 421 46.3
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.7e-65 254.6 436 41.3
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 1.7e-65 254.6 448 48.7
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 2.2e-65 254.2 442 44.1
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 6.3e-65 252.7 446 47.3
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 6.3e-65 252.7 441 45.1
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 1.8e-64 251.1 435 40.7
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 1.8e-64 251.1 436 42.2
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 4.1e-64 250.0 439 43.7
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 5.3e-64 249.6 441 44.2
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 7.0e-64 249.2 457 44.4
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 7.0e-64 249.2 447 42.7
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 1.2e-63 248.4 552 40.8
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.0e-63 247.7 438 48.6
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.5e-63 246.5 430 41.6
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 7.7e-63 245.7 450 46.0
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 7.7e-63 245.7 551 36.3
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 5.0e-62 243.0 463 43.6
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 8.5e-62 242.3 445 39.1
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 3.2e-61 240.4 447 39.4
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 7.2e-61 239.2 431 48.3
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 7.2e-61 239.2 419 40.8
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 9.4e-61 238.8 365 46.0
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.2e-60 238.4 431 39.7
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 2.7e-60 237.3 439 46.7
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 3.6e-60 236.9 452 42.7
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 3.6e-60 236.9 451 41.9
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 8.0e-60 235.7 428 44.2
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 1.0e-59 235.3 436 41.1
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 3.0e-59 233.8 461 39.3
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 5.2e-59 233.0 434 43.5
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 8.8e-59 232.3 442 39.1
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 8.8e-59 232.3 453 41.9
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 2.6e-58 230.7 434 43.8
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 3.3e-58 230.3 423 40.0
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 3.3e-58 230.3 406 42.1
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 5.7e-58 229.6 428 38.6
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.3e-57 228.4 423 43.7
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 1.7e-57 228.0 429 45.5
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 3.7e-57 226.9 454 42.1
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 1.8e-56 224.6 421 42.3
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 2.4e-56 224.2 422 39.6
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 9.1e-56 222.2 439 41.5
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 1.2e-55 221.9 418 42.6
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 2.0e-55 221.1 430 40.5
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 5.9e-55 219.5 402 49.5
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 1.0e-54 218.8 397 39.5
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 1.3e-54 218.4 469 36.5
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 5.0e-54 216.5 397 40.3
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 6.5e-54 216.1 448 37.1
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.5e-53 214.9 426 39.0
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 4.2e-53 213.4 438 35.8
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 4.2e-53 213.4 416 37.5
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 4.7e-52 209.9 340 47.4
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 4.7e-52 209.9 474 42.0
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 1.0e-51 208.8 461 35.4
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.0e-51 208.8 422 37.2
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 1.2e-50 205.3 589 32.1
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 2.0e-50 204.5 432 39.8
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 5.7e-50 203.0 428 36.2
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.7e-49 201.4 418 40.0
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 2.4e-48 197.6 404 40.6
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 5.4e-48 196.4 388 42.5
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 1.6e-47 194.9 421 40.9
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 1.7e-46 191.4 282 44.3
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.7e-46 191.4 432 37.5
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 2.2e-46 191.0 436 39.2
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 3.2e-45 187.2 307 44.0
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.4e-43 181.8 430 35.6
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 5.2e-43 179.9 340 45.6
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 3.4e-42 177.2 427 34.0
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 2.0e-34 151.4 388 33.2
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 9.8e-34 149.1 458 40.6
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 1.2e-31 142.1 367 40.6
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 7.3e-29 132.9 101 68.3
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 6.2e-28 129.8 290 38.3
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 3.1e-27 127.5 145 56.6
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 2.0e-26 124.8 482 26.6
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 3.4e-26 124.0 429 31.2
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 9.8e-26 122.5 103 56.3
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.7e-25 121.7 85 71.8
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 3.7e-25 120.6 296 35.1
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 3.0e-22 110.9 274 35.0
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 3.9e-22 110.5 489 27.6
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 4.7e-20 103.6 425 28.9
HPP92_011157 Vanilla planifolia HOM05D005355 ORTHO05D006591 8.1e-20 102.8 193 37.3
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 2.9e-17 94.4 95 49.5
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 2.9e-17 94.4 81 53.1
Atru.chr13.1434 Acer truncatum HOM05D005355 ORTHO05D006591 1.4e-16 92.0 172 40.7
Peaxi162Scf00914g00033 Petunia axillaris HOM05D005355 ORTHO05D006591 7.1e-16 89.7 275 32.0
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 6.0e-15 86.7 327 30.3
Cpa.g.sc36.52 Carica papaya HOM05D005355 ORTHO05D006591 4.3e-13 80.5 178 35.4
Nitab4.5_0001803g0110 Nicotiana tabacum HOM05D005355 ORTHO05D006591 9.5e-13 79.3 64 65.6
DCAR_011615 Daucus carota HOM05D005355 ORTHO05D006591 1.6e-12 78.6 69 56.5
Nitab4.5_0001273g0010 Nicotiana tabacum HOM05D005355 ORTHO05D006591 4.7e-12 77.0 63 61.9
Nn8g40262 Nelumbo nucifera HOM05D005355 ORTHO05D006591 8.1e-12 76.3 62 64.5
SGA_v2.0_scaffold340G49301 Striga asiatica HOM05D005355 ORTHO05D006591 1.1e-08 65.9 81 49.4
MBI15_g42534_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.1e-08 63.9 62 53.2
SEGI_25872 Sequoiadendron giganteum HOM05D005355 ORTHO05D006591 1.6e-07 62.0 379 30.3


User provided reference genes

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