Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01856 Erythranthe guttata HOM05D001672 ORTHO05D190803 1.6e-54 216.1 125 100.0
SalBow6G6011 Salvia bowleyana HOM05D001672 ORTHO05D008029 3.3e-20 102.1 121 52.9
MSTRG.8200 Avicennia marina HOM05D001672 ORTHO05D008029 1.4e-18 96.7 123 52.8
SGA_v2.0_scaffold122G33194 Striga asiatica HOM05D001672 ORTHO05D008029 8.3e-16 87.4 124 49.2
CAN.G4.22 Capsicum annuum HOM05D001672 ORTHO05D008029 2.1e-11 72.8 57 68.4
HanXRQChr05g0157031 Helianthus annuus HOM05D001672 ORTHO05D008029 4.0e-10 68.6 51 70.6
Cc09_g03960 Coffea canephora HOM05D001672 ORTHO05D008029 8.9e-10 67.4 44 75.0
ECA233G5271 Erigeron canadensis HOM05D001672 ORTHO05D008029 4.4e-09 65.1 60 60.0
DCAR_030007 Daucus carota HOM05D001672 ORTHO05D008029 7.5e-09 64.3 113 41.6
Lsat_1_v5_gn_8_2240 Lactuca sativa HOM05D001672 ORTHO05D008029 1.3e-08 63.5 52 61.5
Nitab4.5_0024954g0010 Nicotiana tabacum HOM05D001672 ORTHO05D008029 2.9e-08 62.4 59 64.4
Actinidia31345 Actinidia chinensis HOM05D001672 ORTHO05D008029 4.9e-08 61.6 55 61.8
MD12G1263000 Malus domestica HOM05D001672 ORTHO05D008029 4.9e-08 61.6 39 74.4
Nitab4.5_0001449g0040 Nicotiana tabacum HOM05D001672 ORTHO05D008029 1.1e-07 60.5 50 70.0
Solyc04g025290.4 Solanum lycopersicum HOM05D001672 ORTHO05D008029 3.2e-07 58.9 38 76.3
Sopen04g011940 Solanum pennellii HOM05D001672 ORTHO05D008029 3.2e-07 58.9 38 76.3
Dinv21370 Davidia involucrata HOM05D001672 ORTHO05D008029 4.1e-07 58.5 42 71.4
Peaxi162Scf00619g00046 Petunia axillaris HOM05D001672 ORTHO05D008029 9.2e-07 57.4 38 76.3
Duzib106G1257 Durio zibethinus HOM05D001672 ORTHO05D008029 1.2e-06 57.0 67 52.2
FAN14G3265 Fragaria x ananassa HOM05D001672 ORTHO05D008029 1.2e-06 57.0 60 51.7
FAN14G4355 Fragaria x ananassa HOM05D001672 ORTHO05D008029 1.2e-06 57.0 60 51.7
GSVIVG01019055001 Vitis vinifera HOM05D001672 ORTHO05D008029 1.2e-06 57.0 64 57.8
Duzib177G0269 Durio zibethinus HOM05D001672 ORTHO05D008029 1.6e-06 56.6 56 57.1
Rhsim09G0128900 Rhododendron simsii HOM05D001672 ORTHO05D008029 1.6e-06 56.6 51 60.8
Duzib150G1308 Durio zibethinus HOM05D001672 ORTHO05D008029 2.1e-06 56.2 56 55.4
AL7G45120 Arabidopsis lyrata HOM05D001672 ORTHO05D008029 2.7e-06 55.8 103 40.8
Nn7g37576 Nelumbo nucifera HOM05D001672 ORTHO05D008029 2.7e-06 55.8 52 55.8
Ah.04g159150 Amaranthus hybridus HOM05D000399 ORTHO05D000304 3.5e-06 55.5 40 72.5
MD04G1247400 Malus domestica HOM05D001672 ORTHO05D008029 3.5e-06 55.5 60 53.3
AUR62006632 Chenopodium quinoa HOM05D001672 ORTHO05D008029 4.6e-06 55.1 40 72.5
Aa31LG9G17900 Aethionema arabicum HOM05D001672 ORTHO05D008029 7.8e-06 54.3 105 37.1
Prupe.6G363800 Prunus persica HOM05D001672 ORTHO05D008029 7.8e-06 54.3 43 62.8
Sabra08G0056400 Salix brachista HOM05D001672 ORTHO05D008029 7.8e-06 54.3 89 37.1
Thecc.05G187200 Theobroma cacao HOM05D001672 ORTHO05D008029 7.8e-06 54.3 52 57.7


User provided reference genes

Program Settings