Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01836 Erythranthe guttata HOM05D005083 ORTHO05D038160 2.3e-37 158.3 74 100.0
MSTRG.8186 Avicennia marina HOM05D005083 ORTHO05D006310 7.1e-23 110.2 64 81.2
Oeu062030.2 Olea europaea HOM05D005083 ORTHO05D006310 2.5e-20 101.7 63 77.8
Dinv15379 Davidia involucrata HOM05D005083 ORTHO05D006310 3.6e-19 97.8 61 68.9
Actinidia06798 Actinidia chinensis HOM05D005083 ORTHO05D006310 4.5e-17 90.9 55 69.1
CANSAT54G2676 Cannabis sativa HOM05D005083 ORTHO05D006310 4.9e-16 87.4 59 66.1
QL08p044788 Quercus lobata HOM05D005083 ORTHO05D006310 4.9e-16 87.4 54 68.5
Potri.010G180700 Populus trichocarpa HOM05D005083 ORTHO05D006310 6.4e-16 87.0 59 59.3
Aqoxy3G04197 Aquilegia oxysepala HOM05D005083 ORTHO05D006310 8.4e-16 86.7 62 58.1
TWI36G0321 Tripterygium wilfordii HOM05D005083 ORTHO05D006310 1.1e-15 86.3 54 68.5
CiPaw.07G085600 Carya illinoinensis HOM05D005083 ORTHO05D006310 1.4e-15 85.9 62 67.7
GSVIVG01032444001 Vitis vinifera HOM05D005083 ORTHO05D006310 3.2e-15 84.7 61 60.7
Haze_04595 Corylus avellana HOM05D005083 ORTHO05D006310 4.2e-15 84.3 60 61.7
Manes.13G001400 Manihot esculenta HOM05D005083 ORTHO05D006310 4.2e-15 84.3 58 60.3
Duzib128G0478 Durio zibethinus HOM05D005083 ORTHO05D006310 5.4e-15 84.0 55 67.3
Prupe.7G036600 Prunus persica HOM05D005083 ORTHO05D006310 5.4e-15 84.0 59 59.3
Rhsim05G0167600 Rhododendron simsii HOM05D005083 ORTHO05D006310 5.4e-15 84.0 59 62.7
AUR62000278 Chenopodium quinoa HOM05D005083 ORTHO05D006310 7.1e-15 83.6 60 60.0
AUR62006625 Chenopodium quinoa HOM05D005083 ORTHO05D006310 7.1e-15 83.6 60 61.7
unitig_22.g6621 Utricularia gibba HOM05D005083 ORTHO05D006310 2.1e-14 82.0 61 62.3
Sopen02g026100 Solanum pennellii HOM05D005083 ORTHO05D006310 2.7e-14 81.6 64 64.1
CSS0010526 Camellia sinensis var. sinensis HOM05D005083 ORTHO05D006310 3.5e-14 81.3 61 60.7
Cc09_g04250 Coffea canephora HOM05D005083 ORTHO05D006310 3.5e-14 81.3 61 60.7
Hund07372 Selenicereus undatus HOM05D005083 ORTHO05D006310 3.5e-14 81.3 61 62.3
Solyc02g081460.4 Solanum lycopersicum HOM05D005083 ORTHO05D006310 6.0e-14 80.5 64 62.5
COL.COLO4_36604 Corchorus olitorius HOM05D005083 ORTHO05D006310 7.9e-14 80.1 55 63.6
PSO210G3440 Papaver somniferum HOM05D005083 ORTHO05D006310 1.3e-13 79.3 61 59.0
MD14G1089300 Malus domestica HOM05D005083 ORTHO05D006310 1.8e-13 79.0 59 55.9
PSO832G1645 Papaver somniferum HOM05D005083 ORTHO05D006310 2.3e-13 78.6 61 57.4
HanXRQChr03g0062031 Helianthus annuus HOM05D005083 ORTHO05D006310 3.9e-13 77.8 64 57.8
Sc16g0010610 Simmondsia chinensis HOM05D005083 ORTHO05D006310 6.7e-13 77.0 56 62.5
PGSC0003DMG400019714 Solanum tuberosum HOM05D005083 ORTHO05D006310 6.7e-13 77.0 64 60.9
AT5G17410 Arabidopsis thaliana HOM05D005083 ORTHO05D006310 1.9e-12 75.5 57 52.6
CSS0033222 Camellia sinensis var. sinensis HOM05D005083 ORTHO05D006310 1.9e-12 75.5 63 60.3
HanXRQChr14g0433021 Helianthus annuus HOM05D005083 ORTHO05D006310 1.9e-12 75.5 61 59.0
Sp6g26810 Schrenkiella parvula HOM05D005083 ORTHO05D006310 1.9e-12 75.5 57 56.1
CSS0048819 Camellia sinensis var. sinensis HOM05D005083 ORTHO05D006310 3.3e-12 74.7 63 60.3
Sed0024795 Sechium edule HOM05D005083 ORTHO05D006310 3.3e-12 74.7 62 58.1
Actinidia03274 Actinidia chinensis HOM05D005083 ORTHO05D038160 4.3e-12 74.3 88 45.5
Aa31LG11G12310 Aethionema arabicum HOM05D005083 ORTHO05D006310 4.3e-12 74.3 57 52.6
Carub.0006s1563 Capsella rubella HOM05D005083 ORTHO05D006310 4.3e-12 74.3 59 52.5
Ah.06g195270 Amaranthus hybridus HOM05D005083 ORTHO05D006310 5.6e-12 73.9 59 55.9
ClCG10G004080 Citrullus lanatus HOM05D005083 ORTHO05D006310 5.6e-12 73.9 60 58.3
CsaV3_3G003930 Cucumis sativus L. HOM05D005083 ORTHO05D006310 5.6e-12 73.9 60 58.3
Nitab4.5_0000842g0030 Nicotiana tabacum HOM05D005083 ORTHO05D006310 9.6e-12 73.2 55 65.5
CAN.G809.91 Capsicum annuum HOM05D005083 ORTHO05D006310 1.3e-11 72.8 61 59.0
MELO3C014078.2 Cucumis melo HOM05D005083 ORTHO05D006310 2.1e-11 72.0 60 56.7
Nitab4.5_0001308g0170 Nicotiana tabacum HOM05D005083 ORTHO05D006310 2.1e-11 72.0 55 63.6
AL6G28480 Arabidopsis lyrata HOM05D005083 ORTHO05D006310 4.8e-11 70.9 58 51.7
BcaB01g04935 Brassica carinata HOM05D005083 ORTHO05D006310 4.8e-11 70.9 58 51.7
Nitab4.5_0002233g0090 Nicotiana tabacum HOM05D005083 ORTHO05D006310 4.8e-11 70.9 55 63.6
CARHR195800 Cardamine hirsuta HOM05D005083 ORTHO05D006310 8.1e-11 70.1 58 51.7
BcaB01g05202 Brassica carinata HOM05D005083 ORTHO05D006310 2.4e-10 68.6 58 51.7
BolC3t13463H Brassica oleracea HOM05D005083 ORTHO05D006310 2.4e-10 68.6 58 51.7
BraA03t10156Z Brassica rapa HOM05D005083 ORTHO05D006310 2.4e-10 68.6 58 51.7
Eucgr.B01438 Eucalyptus grandis HOM05D005083 ORTHO05D006310 3.1e-10 68.2 55 56.4
Thhalv10012868m.g Eutrema salsugineum HOM05D005083 ORTHO05D006310 3.1e-10 68.2 58 51.7
PGR119G1162 Punica granatum HOM05D005083 ORTHO05D006310 3.1e-10 68.2 61 52.5
BcaB08g36773 Brassica carinata HOM05D005083 ORTHO05D006310 5.3e-10 67.4 58 51.7
Ciclev10004486m.g Citrus clementina HOM05D005083 ORTHO05D006310 2.6e-09 65.1 54 57.4
Lsat_1_v5_gn_2_27601 Lactuca sativa HOM05D005083 ORTHO05D006310 2.6e-09 65.1 54 59.3
RcHm_v2.0_Chr3g0447481 Rosa chinensis HOM05D005083 ORTHO05D006310 2.6e-09 65.1 61 49.2
SGA_v2.0_scaffold122G33218 Striga asiatica HOM05D005083 ORTHO05D006310 2.6e-09 65.1 32 90.6
THA.LOC104820850 Tarenaya hassleriana HOM05D005083 ORTHO05D006310 3.4e-09 64.7 59 50.8
Atru.chr12.1671 Acer truncatum HOM05D005083 ORTHO05D006310 1.0e-08 63.2 54 57.4
Zm00001eb425980 Zea mays HOM05D005083 ORTHO05D006310 3.8e-08 61.2 59 49.2
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 6.5e-08 60.5 54 55.6
MBI18_g11247_MAGBIO Magnolia biondii HOM05D005083 ORTHO05D006310 8.4e-08 60.1 65 47.7
MBI18_g24480_MAGBIO Magnolia biondii HOM05D005083 ORTHO05D006310 8.4e-08 60.1 65 47.7
CDE08G0008 Ceratophyllum demersum HOM05D005083 ORTHO05D006310 1.1e-07 59.7 55 50.9
Atru.chr4.1877 Acer truncatum HOM05D005083 ORTHO05D006310 1.4e-07 59.3 54 50.0
FAN02G1711 Fragaria x ananassa HOM05D005083 ORTHO05D006310 1.4e-07 59.3 61 44.3
ATR1096G007 Amborella trichopoda HOM05D005083 ORTHO05D006310 4.2e-07 57.8 55 49.1
FvH4_6g00120 Fragaria vesca HOM05D005083 ORTHO05D006310 4.2e-07 57.8 61 44.3
FAN09G1831 Fragaria x ananassa HOM05D005083 ORTHO05D006310 4.2e-07 57.8 61 44.3
Os04g0501700 Oryza sativa ssp. japonica HOM05D005083 ORTHO05D006310 4.2e-07 57.8 63 44.4
CDE02G0214 Ceratophyllum demersum HOM05D005083 ORTHO05D006310 7.1e-07 57.0 55 49.1


User provided reference genes

Program Settings