Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 3.4e-242 841.3 426 100.0
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 3.5e-199 698.4 440 82.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 6.9e-195 684.1 420 84.0
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 1.9e-192 676.0 420 82.6
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 9.3e-192 673.7 404 84.2
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 7.6e-186 654.1 408 81.4
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 9.9e-186 653.7 415 80.2
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 2.9e-185 652.1 391 83.1
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 2.4e-184 649.0 410 79.5
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 2.4e-184 649.0 410 79.5
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 3.2e-184 648.7 413 79.2
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 5.4e-184 647.9 413 79.2
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 1.6e-183 646.4 410 79.0
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 2.3e-182 642.5 407 79.9
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 1.1e-181 640.2 407 78.6
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 2.1e-180 636.0 432 76.6
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 8.1e-180 634.0 399 80.5
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 8.1e-180 634.0 384 82.0
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 1.1e-179 633.6 423 76.8
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 1.8e-179 632.9 384 82.0
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 2.4e-179 632.5 422 76.3
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 4.0e-179 631.7 419 77.3
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 5.3e-179 631.3 426 76.1
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 1.2e-178 630.2 388 80.7
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.2e-178 630.2 400 79.0
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.6e-178 629.0 413 77.2
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 5.8e-178 627.9 389 79.4
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 5.8e-178 627.9 393 79.1
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 5.8e-178 627.9 420 77.1
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 9.9e-178 627.1 384 81.0
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 1.3e-177 626.7 410 77.3
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 1.3e-177 626.7 408 77.2
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 1.3e-177 626.7 410 77.3
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 1.3e-177 626.7 410 77.3
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 1.3e-177 626.7 408 77.2
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 1.3e-177 626.7 400 78.2
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 1.3e-177 626.7 408 77.5
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 2.2e-177 625.9 399 78.2
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 2.2e-177 625.9 430 74.9
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 2.2e-177 625.9 406 77.3
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 2.9e-177 625.5 393 79.1
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 2.9e-177 625.5 406 77.3
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 2.9e-177 625.5 406 77.3
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 3.8e-177 625.2 406 77.3
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 3.8e-177 625.2 400 78.8
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 4.9e-177 624.8 383 81.2
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 6.4e-177 624.4 406 77.1
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 6.4e-177 624.4 397 77.8
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 8.4e-177 624.0 399 78.2
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 8.4e-177 624.0 391 80.1
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 1.1e-176 623.6 399 77.9
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 1.4e-176 623.2 401 77.6
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 1.4e-176 623.2 410 77.1
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 3.2e-176 622.1 388 79.4
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 3.2e-176 622.1 404 77.7
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 4.2e-176 621.7 428 74.8
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 7.1e-176 620.9 406 76.8
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 7.1e-176 620.9 388 78.9
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 1.2e-175 620.2 400 77.8
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 1.2e-175 620.2 382 80.6
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 1.2e-175 620.2 400 77.5
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 1.2e-175 620.2 400 77.8
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 1.6e-175 619.8 405 76.8
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 2.1e-175 619.4 395 78.7
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 2.7e-175 619.0 388 77.8
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 4.6e-175 618.2 385 80.3
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 4.6e-175 618.2 417 75.3
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 1.3e-174 616.7 396 77.8
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 2.3e-174 615.9 388 78.1
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 2.3e-174 615.9 388 78.1
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 3.0e-174 615.5 402 75.9
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 5.1e-174 614.8 385 79.5
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 6.7e-174 614.4 394 77.2
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 6.7e-174 614.4 424 75.9
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 1.1e-173 613.6 429 73.2
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 1.5e-173 613.2 399 75.4
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 1.9e-173 612.8 383 80.4
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 3.3e-173 612.1 385 79.2
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 4.3e-173 611.7 383 79.1
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 5.6e-173 611.3 417 75.3
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 5.6e-173 611.3 418 74.6
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 1.3e-172 610.1 405 75.8
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 1.3e-172 610.1 405 75.8
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.6e-172 609.8 403 74.9
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.8e-172 609.0 403 74.2
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 4.8e-172 608.2 403 75.4
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 4.8e-172 608.2 413 73.4
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 6.2e-172 607.8 408 75.0
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 6.2e-172 607.8 388 76.5
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 6.2e-172 607.8 403 74.2
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 1.1e-171 607.1 380 79.2
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.1e-171 607.1 403 74.7
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 1.8e-171 606.3 414 74.4
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 2.4e-171 605.9 401 75.3
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.4e-171 605.9 394 75.9
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 2.4e-171 605.9 403 74.9
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 3.1e-171 605.5 387 77.8
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.1e-171 605.5 388 76.3
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 3.1e-171 605.5 388 76.3
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 4.0e-171 605.1 383 78.6
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 1.2e-170 603.6 404 75.0
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 1.2e-170 603.6 401 75.1
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 7.6e-170 600.9 381 79.5
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 1.0e-169 600.5 384 77.1
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 1.0e-169 600.5 390 77.7
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.3e-169 600.1 404 74.8
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 2.2e-169 599.4 395 74.9
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 2.9e-169 599.0 432 72.9
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.9e-169 598.2 404 74.3
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 4.9e-169 598.2 515 62.5
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 1.1e-168 597.0 508 63.6
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 1.4e-168 596.7 408 72.8
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 7.1e-168 594.3 393 74.6
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 6.0e-167 591.3 417 71.9
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 1.3e-166 590.1 434 70.5
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 2.3e-166 589.3 385 74.8
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 1.9e-165 586.3 385 74.5
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 1.9e-165 586.3 394 74.1
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 2.5e-165 585.9 385 74.5
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 5.7e-165 584.7 391 75.7
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.4e-163 580.1 443 68.4
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 1.4e-163 580.1 399 72.7
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 1.8e-163 579.7 386 73.8
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 1.5e-162 576.6 397 73.6
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.7e-161 573.2 389 73.0
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 5.0e-161 571.6 385 73.0
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.5e-160 569.3 404 72.0
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 5.5e-160 568.2 397 73.3
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 1.2e-159 567.0 405 70.4
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 1.2e-159 567.0 387 74.2
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 2.7e-159 565.8 338 84.9
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 3.9e-158 562.0 379 73.9
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 2.8e-156 555.8 342 80.1
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 6.3e-156 554.7 348 82.2
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.0e-150 537.3 370 72.7
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 8.2e-148 527.7 335 78.2
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 6.1e-143 511.5 351 74.9
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 2.3e-142 509.6 338 77.5
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 8.8e-142 507.7 403 67.2
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 2.8e-140 502.7 346 69.9
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 2.4e-139 499.6 333 74.5
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 3.2e-136 489.2 386 65.8
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 5.5e-136 488.4 336 73.5
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 6.1e-135 485.0 375 65.1
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 8.8e-134 481.1 348 70.7
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 1.2e-133 480.7 395 63.8
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 5.5e-128 461.8 417 59.2
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 7.0e-115 418.3 261 77.0
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 2.0e-114 416.8 341 63.0
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 6.1e-111 405.2 257 78.6
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 5.2e-110 402.1 260 76.2
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 1.6e-106 390.6 393 56.0
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 3.7e-92 342.8 230 75.7
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 5.8e-85 318.9 185 84.3
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 6.6e-81 305.4 218 67.9
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 2.1e-79 300.4 204 75.0
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.6e-79 299.7 181 81.2
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 3.4e-77 293.1 368 43.5
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 5.8e-77 292.4 357 49.6
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 5.6e-64 249.2 146 83.6
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 4.0e-62 243.0 155 75.5
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 7.4e-56 222.2 220 59.1
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 3.7e-55 219.9 187 59.9
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 3.7e-55 219.9 187 59.9
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.2e-50 204.9 244 52.0
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 6.5e-36 156.0 99 79.8
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 3.2e-35 153.7 103 68.0
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 4.4e-32 143.3 222 46.4
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 4.5e-21 106.7 59 89.8
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 5.9e-21 106.3 83 68.7
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.5e-19 101.7 282 30.1
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 3.4e-16 90.5 58 81.0
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 3.4e-16 90.5 58 81.0
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 4.4e-16 90.1 90 57.8
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 9.8e-16 89.0 90 50.0
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 1.3e-15 88.6 45 91.1
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 1.8e-14 84.7 75 61.3
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 5.4e-14 83.2 45 84.4
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 3.8e-12 77.0 47 78.7
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 2.6e-08 64.3 38 78.9
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 3.7e-07 60.5 42 71.4
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 8.3e-07 59.3 74 47.3
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 2.4e-06 57.8 74 48.6
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 2.4e-06 57.8 74 48.6
MBI09_g06128_MAGBIO Magnolia biondii HOM05D018637 ORTHO05D012924 3.1e-06 57.4 46 54.3


User provided reference genes

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