Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 2.4e-65 251.9 120 100.0
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 9.0e-60 233.4 119 90.8
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 2.2e-58 228.8 120 86.7
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 6.7e-55 217.2 120 82.5
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 86.7
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 83.3
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 83.3
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 2.2e-53 212.2 120 77.5
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 6.3e-53 210.7 120 81.7
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 6.3e-53 210.7 120 84.2
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 82.5
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 81.7
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 80.8
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 80.8
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 80.8
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 80.8
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 80.8
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 80.8
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 80.0
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 84.2
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 81.7
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 80.8
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 1.4e-52 209.5 120 80.8
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 1.4e-52 209.5 120 80.8
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 80.8
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 80.8
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 80.8
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 80.8
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 1.8e-52 209.1 120 80.8
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 1.8e-52 209.1 120 81.7
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 1.8e-52 209.1 120 80.0
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 81.7
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 81.7
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 85.0
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 80.8
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 80.0
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 82.5
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 5.3e-52 207.6 120 80.0
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.3e-52 207.6 120 80.8
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.3e-52 207.6 120 80.8
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.3e-52 207.6 120 80.8
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 5.3e-52 207.6 120 81.7
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 5.3e-52 207.6 120 80.8
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 6.9e-52 207.2 120 80.0
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 6.9e-52 207.2 120 80.8
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 6.9e-52 207.2 120 80.8
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 9.0e-52 206.8 120 79.2
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 9.0e-52 206.8 120 80.0
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 80.8
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 1.2e-51 206.5 118 80.5
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.5e-51 206.1 120 80.0
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 2.0e-51 205.7 120 79.2
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.0e-51 205.7 120 80.0
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 2.0e-51 205.7 120 83.3
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 79.2
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 80.0
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 80.0
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 79.2
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 79.2
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 79.2
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 80.0
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 80.0
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 2.6e-51 205.3 118 80.5
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 3.4e-51 204.9 118 80.5
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 3.4e-51 204.9 120 80.8
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 4.5e-51 204.5 118 81.4
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 5.9e-51 204.1 120 78.3
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 7.7e-51 203.8 118 78.0
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 1.0e-50 203.4 120 80.0
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 1.0e-50 203.4 120 77.5
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.0e-50 203.4 120 80.0
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.0e-50 203.4 120 80.0
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 1.0e-50 203.4 120 80.0
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 1.0e-50 203.4 120 78.3
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 1.3e-50 203.0 117 81.2
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 1.3e-50 203.0 120 79.2
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.7e-50 202.6 120 77.5
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.7e-50 202.6 120 78.3
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 2.2e-50 202.2 120 79.2
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 2.2e-50 202.2 120 76.7
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 3.8e-50 201.4 120 76.7
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 5.0e-50 201.1 120 76.7
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 5.0e-50 201.1 120 77.5
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 5.0e-50 201.1 120 78.3
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 5.0e-50 201.1 120 76.7
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 6.5e-50 200.7 118 78.0
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 6.5e-50 200.7 120 79.2
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 6.5e-50 200.7 118 79.7
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 6.5e-50 200.7 120 75.8
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 1.1e-49 199.9 118 78.8
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 1.1e-49 199.9 120 78.3
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 1.4e-49 199.5 118 79.7
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 1.4e-49 199.5 118 78.8
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 1.4e-49 199.5 118 78.8
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 1.4e-49 199.5 118 80.5
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 2.5e-49 198.7 120 77.5
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 2.5e-49 198.7 118 78.0
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 3.2e-49 198.4 118 78.8
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 4.2e-49 198.0 117 76.1
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 5.5e-49 197.6 118 78.0
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 7.2e-49 197.2 120 78.3
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 1.2e-48 196.4 118 78.0
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 2.1e-48 195.7 118 78.0
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 3.6e-48 194.9 120 74.2
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 6.1e-48 194.1 110 79.1
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 7.9e-48 193.7 120 75.0
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 1.0e-47 193.4 120 74.2
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 1.4e-47 193.0 120 75.0
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 1.8e-47 192.6 120 75.8
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 2.3e-47 192.2 118 77.1
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 2.3e-47 192.2 111 79.3
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 3.9e-47 191.4 117 77.8
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 6.7e-47 190.7 111 79.3
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 6.7e-47 190.7 144 67.4
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 1.1e-46 189.9 120 73.3
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.1e-46 189.9 119 75.6
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 1.5e-46 189.5 120 73.3
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 4.8e-45 184.5 110 77.3
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 6.3e-45 184.1 110 79.1
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 3.1e-44 181.8 110 78.2
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 6.9e-44 180.6 112 77.7
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 3.8e-42 174.9 111 74.8
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.2e-40 169.9 90 87.8
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.4e-39 166.4 107 74.8
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 2.3e-39 165.6 131 62.6
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 3.3e-38 161.8 110 73.6
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 3.3e-38 161.8 110 73.6
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 4.4e-38 161.4 86 80.2
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 2.8e-37 158.7 110 72.7
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 4.8e-37 157.9 213 43.2
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 8.2e-37 157.1 95 78.9
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 8.2e-37 157.1 122 63.9
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 8.2e-37 157.1 95 80.0
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 8.2e-37 157.1 120 65.0
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 1.4e-36 156.4 120 59.2
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 2.4e-36 155.6 94 78.7
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 2.0e-35 152.5 133 54.9
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 3.5e-35 151.8 120 62.5
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.0e-34 150.2 91 79.1
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.7e-34 149.4 93 77.4
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.5e-34 147.5 91 78.0
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 8.5e-34 147.1 91 74.7
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 2.5e-33 145.6 93 73.1
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 2.5e-33 145.6 91 75.8
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 2.5e-33 145.6 120 57.5
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 3.2e-33 145.2 91 78.0
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 7.2e-33 144.1 91 76.9
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 1.2e-32 143.3 91 74.7
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.6e-32 142.9 91 74.7
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 2.7e-32 142.1 169 47.9
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 3.6e-32 141.7 136 58.1
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 6.7e-31 137.5 85 76.5
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 9.7e-30 133.7 82 75.6
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.8e-28 129.4 77 80.5
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 4.1e-28 128.3 95 67.4
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 9.1e-28 127.1 93 66.7
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 5.5e-25 117.9 119 45.4
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 9.4e-25 117.1 62 85.5
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 1.2e-24 116.7 62 83.9
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 1.6e-24 116.3 62 83.9
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 1.8e-23 112.8 62 80.6
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 4.8e-21 104.8 89 61.8
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 1.4e-20 103.2 108 45.4
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 9.1e-20 100.5 120 45.8
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 1.7e-18 96.3 82 62.2
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 1.1e-17 93.6 56 73.2
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 2.7e-16 89.0 115 40.0
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.6e-16 88.6 61 68.9
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.8e-15 86.3 61 67.2
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.3e-13 77.8 57 64.9
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 2.3e-10 69.3 44 75.0
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 3.4e-06 55.5 38 68.4


User provided reference genes

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