Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 4.7e-35 151.4 124 100.0
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 8.2e-24 114.0 71 78.9
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 3.1e-23 112.1 69 79.7
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 7.0e-23 110.9 71 78.9
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 1.6e-22 109.8 72 80.6
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 3.5e-22 108.6 71 76.1
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 4.5e-22 108.2 69 78.3
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 5.9e-22 107.8 70 77.1
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.0e-21 107.1 69 76.8
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 1.0e-21 107.1 70 78.6
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 1.0e-21 107.1 70 78.6
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.0e-21 107.1 73 75.3
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.3e-21 106.7 72 75.0
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 2.2e-21 105.9 69 75.4
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 2.9e-21 105.5 70 77.1
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 3.8e-21 105.1 69 75.4
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 8.5e-21 104.0 69 73.9
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.1e-20 103.6 69 78.3
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.1e-20 103.6 70 75.7
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 1.1e-20 103.6 70 75.7
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 1.1e-20 103.6 70 75.7
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.5e-20 103.2 70 75.7
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 1.5e-20 103.2 69 78.3
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 1.9e-20 102.8 71 74.6
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 3.2e-20 102.1 68 75.0
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 3.2e-20 102.1 68 69.1
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 4.2e-20 101.7 71 66.2
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 4.2e-20 101.7 71 74.6
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 4.2e-20 101.7 68 77.9
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 5.5e-20 101.3 67 77.6
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 5.5e-20 101.3 68 76.5
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 5.5e-20 101.3 68 76.5
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 5.5e-20 101.3 71 73.2
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 7.2e-20 100.9 70 75.7
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 1.2e-19 100.1 68 76.5
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.2e-19 100.1 70 74.3
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 2.1e-19 99.4 71 71.8
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 2.1e-19 99.4 71 71.8
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 2.1e-19 99.4 67 73.1
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 2.1e-19 99.4 71 64.8
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 2.1e-19 99.4 70 70.0
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 2.1e-19 99.4 69 73.9
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 3.6e-19 98.6 73 68.5
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 8.0e-19 97.4 71 71.8
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 8.0e-19 97.4 70 68.6
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 8.0e-19 97.4 68 72.1
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 8.0e-19 97.4 57 80.7
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 8.0e-19 97.4 69 71.0
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 1.0e-18 97.1 69 73.9
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 1.0e-18 97.1 69 72.5
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 1.4e-18 96.7 68 72.1
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 2.3e-18 95.9 69 71.0
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 3.0e-18 95.5 69 71.0
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 4.0e-18 95.1 69 69.6
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 5.2e-18 94.7 69 69.6
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 5.2e-18 94.7 70 70.0
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 6.8e-18 94.4 69 68.1
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 6.8e-18 94.4 69 68.1
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 6.8e-18 94.4 69 68.1
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 6.8e-18 94.4 68 70.6
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 8.8e-18 94.0 69 65.2
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 8.8e-18 94.0 67 68.7
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 8.8e-18 94.0 67 68.7
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 8.8e-18 94.0 67 65.7
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 2.0e-17 92.8 73 67.1
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 2.0e-17 92.8 73 67.1
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 2.6e-17 92.4 69 69.6
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.6e-17 92.4 73 65.8
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 3.4e-17 92.0 69 68.1
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 3.4e-17 92.0 59 78.0
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 3.4e-17 92.0 70 64.3
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 4.4e-17 91.7 67 70.1
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 7.5e-17 90.9 73 65.8
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 7.5e-17 90.9 67 65.7
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 9.8e-17 90.5 71 67.6
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 1.7e-16 89.7 67 65.7
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.8e-16 89.0 66 69.7
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 2.8e-16 89.0 65 72.3
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 2.8e-16 89.0 65 72.3
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 2.8e-16 89.0 65 72.3
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 2.8e-16 89.0 65 72.3
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 4.8e-16 88.2 69 65.2
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 6.3e-16 87.8 65 70.8
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 8.3e-16 87.4 63 65.1
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 8.3e-16 87.4 69 65.2
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 1.1e-15 87.0 73 63.0
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 2.4e-15 85.9 60 70.0
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 9.1e-15 84.0 114 47.4
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 7.7e-14 80.9 62 64.5
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 2.9e-13 79.0 65 53.8
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.0e-13 78.2 58 67.2
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 8.5e-13 77.4 66 51.5
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 8.5e-13 77.4 68 57.4
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.2e-11 73.6 94 50.0
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.6e-11 73.2 46 78.3
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 8.0e-11 70.9 62 54.8


User provided reference genes

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