Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01496 Erythranthe guttata HOM05D008199 ORTHO05D010334 2.5e-26 121.3 59 100.0
PGSC0003DMG400029465 Solanum tuberosum HOM05D008199 ORTHO05D010334 6.7e-16 86.7 57 71.9
CAN.G74.25 Capsicum annuum HOM05D008199 ORTHO05D010334 3.3e-15 84.3 56 71.4
CiPaw.01G282700 Carya illinoinensis HOM05D008199 ORTHO05D010334 3.3e-15 84.3 47 80.9
Sc20g0002530 Simmondsia chinensis HOM05D008199 ORTHO05D010334 4.3e-15 84.0 49 75.5
Oeu021440.1 Olea europaea HOM05D008199 ORTHO05D010334 1.3e-14 82.4 57 66.7
Hma1.2p1_0727F.1_g209100 Hydrangea macrophylla HOM05D008199 ORTHO05D010334 1.7e-14 82.0 55 63.6
Gorai.012G069200 Gossypium raimondii HOM05D008199 ORTHO05D010334 3.7e-14 80.9 55 67.3
TWI38G1458 Tripterygium wilfordii HOM05D008199 ORTHO05D010334 3.7e-14 80.9 52 73.1
Dinv31422 Davidia involucrata HOM05D000953 ORTHO05D000231 4.8e-14 80.5 57 61.4
Gohir.A05G350700 Gossypium hirsutum HOM05D008199 ORTHO05D010334 4.8e-14 80.5 55 67.3
Nn2g10469 Nelumbo nucifera HOM05D008199 ORTHO05D010334 4.8e-14 80.5 49 71.4
Potri.008G051100 Populus trichocarpa HOM05D008199 ORTHO05D010334 4.8e-14 80.5 52 69.2
GSVIVG01016602001 Vitis vinifera HOM05D000953 ORTHO05D000231 4.8e-14 80.5 53 64.2
Medtr1g115355 Medicago truncatula HOM05D008199 ORTHO05D010334 6.3e-14 80.1 47 74.5
PGR142G1326 Punica granatum HOM05D008199 ORTHO05D010334 6.3e-14 80.1 49 71.4
RcHm_v2.0_Chr1g0366131 Rosa chinensis HOM05D008199 ORTHO05D010334 6.3e-14 80.1 45 82.2
ECA238G2613 Erigeron canadensis HOM05D008199 ORTHO05D010334 1.1e-13 79.3 51 74.5
Gohir.D04G061900 Gossypium hirsutum HOM05D008199 ORTHO05D010334 1.1e-13 79.3 55 65.5
CSS0014372 Camellia sinensis var. sinensis HOM05D008199 ORTHO05D010334 1.4e-13 79.0 57 63.2
Cpa.g.sc1.358 Carica papaya HOM05D008199 ORTHO05D010334 1.8e-13 78.6 53 67.9
Sed0003138 Sechium edule HOM05D008199 ORTHO05D010334 1.8e-13 78.6 45 75.6
Cfa001517 Carpinus fangiana HOM05D008199 ORTHO05D010334 2.4e-13 78.2 47 72.3
Manes.07G111800 Manihot esculenta HOM05D008199 ORTHO05D010334 2.4e-13 78.2 49 69.4
Actinidia07733 Actinidia chinensis HOM05D008199 ORTHO05D010334 3.1e-13 77.8 60 63.3
Actinidia34336 Actinidia chinensis HOM05D008199 ORTHO05D010334 3.1e-13 77.8 60 63.3
CANSAT11G0099 Cannabis sativa HOM05D008199 ORTHO05D010334 3.1e-13 77.8 49 71.4
ClCG09G020150 Citrullus lanatus HOM05D008199 ORTHO05D010334 4.1e-13 77.4 51 66.7
Aqoxy5G00469 Aquilegia oxysepala HOM05D008199 ORTHO05D010334 6.9e-13 76.6 51 66.7
Actinidia02971 Actinidia chinensis HOM05D008199 ORTHO05D010334 9.1e-13 76.3 56 62.5
Glyma.20G099000 Glycine max HOM05D008199 ORTHO05D010334 1.5e-12 75.5 45 73.3
Aa31LG5G20100 Aethionema arabicum HOM05D008199 ORTHO05D010334 2.0e-12 75.1 56 57.1
Lsat_1_v5_gn_2_117560 Lactuca sativa HOM05D008199 ORTHO05D010334 2.0e-12 75.1 51 70.6
PSO339G4122 Papaver somniferum HOM05D008199 ORTHO05D010334 2.0e-12 75.1 45 71.1
Lj5g0016979 Lotus japonicus HOM05D008199 ORTHO05D010334 2.6e-12 74.7 50 66.0
Lalb_Chr02g0144051 Lupinus albus HOM05D008199 ORTHO05D010334 2.6e-12 74.7 45 73.3
DCAR_027672 Daucus carota HOM05D008199 ORTHO05D010334 3.4e-12 74.3 55 61.8
Atru.chr12.520 Acer truncatum HOM05D008199 ORTHO05D010334 4.5e-12 73.9 57 64.9
MBI05_g35603_MAGBIO Magnolia biondii HOM05D008199 ORTHO05D010334 4.5e-12 73.9 48 68.8
C04p08150 Brassica napus HOM05D008199 ORTHO05D010334 5.9e-12 73.6 53 60.4
BolC4t22425H Brassica oleracea HOM05D008199 ORTHO05D010334 5.9e-12 73.6 53 60.4
AL4G36900 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 7.7e-12 73.2 49 65.3
BcaC02g12078 Brassica carinata HOM05D008199 ORTHO05D010334 7.7e-12 73.2 53 60.4
A05p06880 Brassica napus HOM05D008199 ORTHO05D010334 7.7e-12 73.2 53 60.4
BraA05t19653Z Brassica rapa HOM05D008199 ORTHO05D010334 7.7e-12 73.2 53 60.4
Prupe.2G230900 Prunus persica HOM05D008199 ORTHO05D010334 7.7e-12 73.2 54 64.8
COL.COLO4_14948 Corchorus olitorius HOM05D008199 ORTHO05D010334 1.0e-11 72.8 52 65.4
MD01G1123400 Malus domestica HOM05D008199 ORTHO05D010334 1.0e-11 72.8 50 66.0
TAR633G0052 Trochodendron aralioides HOM05D008199 ORTHO05D010334 1.0e-11 72.8 49 61.2
Psat6g236360 Pisum sativum HOM05D008199 ORTHO05D010334 1.3e-11 72.4 41 75.6
AL4G36920 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 1.7e-11 72.0 46 67.4
CARHR134390 Cardamine hirsuta HOM05D008199 ORTHO05D010334 1.7e-11 72.0 51 60.8
THA.LOC104824262 Tarenaya hassleriana HOM05D008199 ORTHO05D010334 1.7e-11 72.0 53 58.5
Thecc.10G048500 Theobroma cacao HOM05D008199 ORTHO05D010334 1.7e-11 72.0 45 71.1
AT2G39500 Arabidopsis thaliana HOM05D008199 ORTHO05D010334 2.2e-11 71.6 46 65.2
Sp4g21800 Schrenkiella parvula HOM05D008199 ORTHO05D010334 6.5e-11 70.1 53 56.6
Carub.0004s2158 Capsella rubella HOM05D008199 ORTHO05D010334 8.5e-11 69.7 51 58.8
Manes.10G036000 Manihot esculenta HOM05D008199 ORTHO05D010334 1.4e-10 68.9 40 72.5
SEGI_29944 Sequoiadendron giganteum HOM05D008199 ORTHO05D010334 1.4e-10 68.9 37 81.1
Zm00001eb362160 Zea mays HOM05D008199 ORTHO05D010334 1.4e-10 68.9 46 65.2
Ciclev10033682m.g Citrus clementina HOM05D008199 ORTHO05D010334 3.2e-10 67.8 43 69.8
Phvul.007G011200 Phaseolus vulgaris HOM05D008199 ORTHO05D010334 1.2e-09 65.9 43 60.5
Duzib128G0439 Durio zibethinus HOM05D008199 ORTHO05D010334 7.9e-09 63.2 38 73.7
Pp3c9_50 Physcomitrium patens HOM05D008199 ORTHO05D010334 4.4e-07 57.4 37 62.2
SHI12594 Sapria himalayana HOM05D008199 ORTHO05D010334 1.3e-06 55.8 72 40.3
Mapoly0090s0027 Marchantia polymorpha HOM05D008199 ORTHO05D010334 4.8e-06 53.9 35 62.9


User provided reference genes

Program Settings