Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 9.5e-119 430.3 226 100.0
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 3.3e-55 219.2 228 55.7
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.4e-53 213.0 226 54.0
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 9.0e-45 184.5 255 47.1
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 4.2e-42 175.6 245 45.7
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 7.2e-42 174.9 255 44.3
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 9.4e-42 174.5 253 44.3
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 1.6e-41 173.7 251 44.6
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 4.6e-41 172.2 243 44.9
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 6.1e-41 171.8 251 44.2
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 3.9e-40 169.1 238 44.5
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 5.1e-40 168.7 237 43.0
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 5.1e-40 168.7 258 41.5
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 6.7e-40 168.3 231 45.9
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 1.1e-39 167.5 256 45.3
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.5e-39 167.2 243 43.6
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 2.0e-39 166.8 230 44.8
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 4.3e-39 165.6 250 43.6
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 4.3e-39 165.6 238 42.0
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 5.7e-39 165.2 253 43.1
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 9.7e-39 164.5 220 43.6
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 9.7e-39 164.5 220 42.7
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 1.3e-38 164.1 235 44.3
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 1.7e-38 163.7 211 46.0
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 8.2e-38 161.4 257 43.2
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 1.1e-37 161.0 244 40.6
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.1e-37 161.0 201 46.8
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 1.8e-37 160.2 238 45.0
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 4.1e-37 159.1 258 39.1
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 6.9e-37 158.3 258 39.1
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 9.1e-37 157.9 129 61.2
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 9.1e-37 157.9 227 44.5
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 9.1e-37 157.9 243 40.3
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.6e-36 156.4 256 40.6
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 3.4e-36 156.0 238 44.5
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 4.5e-36 155.6 191 49.7
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 7.7e-36 154.8 149 57.0
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 7.7e-36 154.8 266 41.0
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 7.7e-36 154.8 227 44.1
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 1.0e-35 154.5 227 44.1
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 1.7e-35 153.7 230 42.2
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 1.7e-35 153.7 204 43.6
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.7e-35 153.7 235 43.0
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 1.7e-35 153.7 254 39.4
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 2.9e-35 152.9 255 38.8
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 2.9e-35 152.9 179 52.0
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 3.8e-35 152.5 139 59.0
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 3.8e-35 152.5 149 56.4
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 3.8e-35 152.5 149 56.4
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 5.0e-35 152.1 162 52.5
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 6.5e-35 151.8 159 54.1
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 6.5e-35 151.8 251 41.0
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 6.5e-35 151.8 227 43.2
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 8.5e-35 151.4 123 61.8
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 8.5e-35 151.4 114 66.7
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 8.5e-35 151.4 114 66.7
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 8.5e-35 151.4 114 66.7
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 8.5e-35 151.4 114 66.7
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 8.5e-35 151.4 246 39.8
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 8.5e-35 151.4 249 39.0
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 1.1e-34 151.0 183 45.9
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 1.1e-34 151.0 198 46.0
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 1.4e-34 150.6 147 53.1
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 1.9e-34 150.2 249 40.2
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.5e-34 149.8 220 40.0
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 5.5e-34 148.7 151 56.3
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 3.6e-33 146.0 192 46.4
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 4.7e-33 145.6 232 44.8
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 6.1e-33 145.2 240 37.5
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.0e-32 144.4 174 46.6
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 1.4e-32 144.1 166 48.2
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 1.8e-32 143.7 256 38.3
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 2.3e-32 143.3 154 52.6
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 3.9e-32 142.5 241 42.3
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 2.0e-31 140.2 185 47.6
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 2.6e-31 139.8 162 45.7
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 5.7e-31 138.7 104 62.5
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 5.7e-31 138.7 104 62.5
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 9.7e-31 137.9 263 38.4
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 1.7e-30 137.1 226 39.4
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 2.2e-30 136.7 255 38.4
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 2.2e-30 136.7 148 53.4
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 2.2e-30 136.7 253 37.9
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 2.8e-30 136.3 253 37.5
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 2.8e-30 136.3 243 38.7
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 3.7e-30 136.0 252 39.7
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 4.8e-30 135.6 228 40.8
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 6.3e-30 135.2 203 40.9
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.4e-29 134.0 163 46.6
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 1.8e-29 133.7 234 38.0
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 2.4e-29 133.3 199 42.7
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 7.0e-29 131.7 252 37.3
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 2.6e-28 129.8 240 37.1
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 4.5e-28 129.0 261 38.7
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 4.5e-28 129.0 261 38.7
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 4.5e-28 129.0 263 38.4
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 1.7e-27 127.1 136 55.1
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.9e-26 123.6 203 40.9
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 5.5e-26 122.1 171 45.0
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 2.7e-25 119.8 251 35.9
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 3.0e-24 116.3 158 44.3
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 8.8e-24 114.8 192 42.2
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 3.3e-23 112.8 222 37.8
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 4.1e-21 105.9 151 40.4
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 1.2e-20 104.4 83 60.2
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.9e-19 99.8 133 45.1
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 1.1e-18 97.8 138 41.3
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 5.4e-13 79.0 180 32.2
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 2.6e-07 60.1 165 32.1


User provided reference genes

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