Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 8.2e-124 447.6 323 100.0
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 9.2e-67 258.1 315 47.3
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 1.6e-47 194.1 285 54.4
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 1.7e-41 174.1 306 64.7
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 1.5e-40 171.0 308 59.1
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 3.1e-38 163.3 281 48.8
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 6.9e-38 162.2 304 44.7
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 9.0e-38 161.8 306 41.5
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 3.4e-37 159.8 276 37.0
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 1.7e-36 157.5 283 48.4
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 1.9e-35 154.1 310 55.5
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 2.4e-35 153.7 288 34.0
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 2.4e-35 153.7 310 55.2
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 5.4e-35 152.5 322 59.0
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 9.3e-35 151.8 310 54.8
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 1.2e-34 151.4 319 57.1
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 6.0e-34 149.1 318 55.0
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 1.3e-33 147.9 295 40.3
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 1.3e-33 147.9 294 56.8
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 5.1e-33 146.0 278 62.2
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 6.7e-33 145.6 303 60.7
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 1.8e-30 137.5 313 56.5
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.8e-30 137.5 285 47.0
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 2.4e-30 137.1 310 44.2
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 2.4e-30 137.1 282 62.4
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 3.4e-29 133.3 285 56.8
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 9.9e-29 131.7 285 41.1
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.3e-28 131.3 309 46.3
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 1.7e-28 131.0 284 48.2
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 1.7e-28 131.0 280 48.6
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 1.7e-28 131.0 280 48.6
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 1.7e-28 131.0 284 48.2
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 2.2e-28 130.6 288 55.9
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 2.9e-28 130.2 304 47.0
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 2.9e-28 130.2 309 46.6
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 3.8e-28 129.8 290 47.9
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 6.4e-28 129.0 311 29.9
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 8.4e-28 128.6 285 59.6
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 1.9e-27 127.5 287 57.1
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 2.4e-27 127.1 287 57.1
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 4.2e-27 126.3 284 47.5
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 5.5e-27 125.9 284 50.4
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.2e-26 124.8 309 46.0
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 1.6e-26 124.4 288 56.6
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 4.6e-26 122.9 291 38.5
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 6.0e-26 122.5 285 57.2
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 7.9e-26 122.1 296 56.4
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 1.3e-25 121.3 295 40.0
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 1.3e-25 121.3 283 30.0
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 3.0e-25 120.2 295 56.9
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 3.0e-25 120.2 306 34.0
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 5.1e-25 119.4 295 56.6
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.9e-24 117.5 289 38.4
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 3.3e-24 116.7 318 55.0
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 1.6e-23 114.4 276 57.6
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 2.1e-23 114.0 261 60.9
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 2.8e-23 113.6 274 55.1
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 2.8e-23 113.6 283 43.5
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 4.8e-23 112.8 127 49.6
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 6.2e-23 112.5 285 48.1
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 6.9e-22 109.0 266 29.7
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 2.0e-21 107.5 115 45.2
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 1.3e-20 104.8 286 39.5
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.7e-20 104.4 286 35.7
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 3.8e-20 103.2 310 50.3
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 1.1e-19 101.7 297 39.7
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 7.1e-19 99.0 282 55.3
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 9.3e-19 98.6 123 43.9
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 1.2e-18 98.2 279 46.2
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.6e-18 97.8 276 29.0
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 1.3e-17 94.7 287 24.0
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 8.7e-17 92.0 280 25.4
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 1.8e-14 84.3 294 37.4
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 1.8e-14 84.3 286 40.6
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 4.1e-14 83.2 315 35.9
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 6.9e-14 82.4 97 41.2
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 6.9e-14 82.4 97 41.2
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 3.4e-13 80.1 124 37.1
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 7.2e-11 72.4 189 48.7
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 9.4e-11 72.0 126 35.7
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 1.6e-10 71.2 298 44.0
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 2.3e-09 67.4 101 36.6
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 6.7e-09 65.9 76 42.1
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 8.8e-09 65.5 236 45.3
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 7.4e-08 62.4 108 34.3
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 9.7e-08 62.0 107 33.6
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 3.1e-06 57.0 75 37.3


User provided reference genes

Program Settings