Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01462 Erythranthe guttata HOM05D001518 ORTHO05D006498 9.4e-99 363.6 196 100.0
SGA_v2.0_scaffold145G36000 Striga asiatica HOM05D001518 ORTHO05D006498 1.2e-61 240.4 199 62.8
Migut.F00620 Erythranthe guttata HOM05D001518 ORTHO05D006498 4.9e-55 218.4 202 58.4
SalBow3G0728 Salvia bowleyana HOM05D001518 ORTHO05D006498 4.6e-53 211.8 196 59.2
SalBow5G2006 Salvia bowleyana HOM05D001518 ORTHO05D006498 1.3e-52 210.3 188 61.2
CAN.G659.7 Capsicum annuum HOM05D001518 ORTHO05D006498 3.2e-46 189.1 174 54.6
DCAR_011861 Daucus carota HOM05D001518 ORTHO05D006498 4.2e-46 188.7 178 54.5
Solyc06g050620.3 Solanum lycopersicum HOM05D001518 ORTHO05D006498 3.0e-44 182.6 158 58.9
Lj1C962G10 Lonicera japonica HOM05D001518 ORTHO05D006498 3.9e-44 182.2 156 61.5
Dinv21799 Davidia involucrata HOM05D001518 ORTHO05D006498 5.1e-44 181.8 188 55.3
Nitab4.5_0001291g0130 Nicotiana tabacum HOM05D001518 ORTHO05D006498 5.1e-44 181.8 190 53.2
Lj8A60T48 Lonicera japonica HOM05D001518 ORTHO05D006498 8.7e-44 181.0 218 48.6
Rhsim03G0148300 Rhododendron simsii HOM05D001518 ORTHO05D006498 8.7e-44 181.0 143 62.2
Sopen06g016190 Solanum pennellii HOM05D001518 ORTHO05D006498 1.1e-43 180.6 158 58.2
Actinidia29734 Actinidia chinensis HOM05D001518 ORTHO05D006498 1.9e-43 179.9 159 60.4
AUR62022961 Chenopodium quinoa HOM05D001518 ORTHO05D006498 7.3e-43 177.9 163 60.1
TAR623G1694 Trochodendron aralioides HOM05D001518 ORTHO05D006498 9.6e-43 177.6 145 60.0
unitig_62.g23927 Utricularia gibba HOM05D001518 ORTHO05D006498 1.3e-42 177.2 178 53.9
Nitab4.5_0002854g0050 Nicotiana tabacum HOM05D001518 ORTHO05D006498 3.6e-42 175.6 146 74.7
QL08p064026 Quercus lobata HOM05D001518 ORTHO05D006498 3.6e-42 175.6 165 57.6
AUR62012321 Chenopodium quinoa HOM05D001518 ORTHO05D006498 4.8e-42 175.3 161 59.6
PGSC0003DMG400023943 Solanum tuberosum HOM05D001518 ORTHO05D006498 4.8e-42 175.3 178 61.8
Sc11g0005470 Simmondsia chinensis HOM05D001518 ORTHO05D006498 1.4e-41 173.7 186 60.8
FAN06G3540 Fragaria x ananassa HOM05D001518 ORTHO05D006498 1.8e-41 173.3 182 51.6
FvH4_7g25380 Fragaria vesca HOM05D001518 ORTHO05D006498 2.4e-41 172.9 182 51.6
TWI53G0536 Tripterygium wilfordii HOM05D001518 ORTHO05D006498 1.5e-40 170.2 167 59.3
ClCG11G005950 Citrullus lanatus HOM05D001518 ORTHO05D006498 2.0e-40 169.9 145 60.0
FAN03G1866 Fragaria x ananassa HOM05D001518 ORTHO05D006498 2.6e-40 169.5 152 58.6
Ciclev10030811m.g Citrus clementina HOM05D001518 ORTHO05D006498 3.4e-40 169.1 208 48.6
Aqoxy2G00769 Aquilegia oxysepala HOM05D001518 ORTHO05D006498 5.8e-40 168.3 155 54.2
Nn2g11022 Nelumbo nucifera HOM05D001518 ORTHO05D006498 5.8e-40 168.3 176 51.1
ECA238G1259 Erigeron canadensis HOM05D001518 ORTHO05D006498 9.9e-40 167.5 142 60.6
HanXRQChr07g0203501 Helianthus annuus HOM05D001518 ORTHO05D006498 9.9e-40 167.5 149 59.1
Lsat_1_v5_gn_2_125780 Lactuca sativa HOM05D001518 ORTHO05D006498 9.9e-40 167.5 182 52.2
Manes.10G007200 Manihot esculenta HOM05D001518 ORTHO05D006498 9.9e-40 167.5 152 56.6
PGR044G0181 Punica granatum HOM05D001518 ORTHO05D006498 2.2e-39 166.4 173 62.4
CANSAT56G0726 Cannabis sativa HOM05D001518 ORTHO05D006498 6.4e-39 164.9 182 52.2
CsaV3_6G002050 Cucumis sativus L. HOM05D001518 ORTHO05D006498 6.4e-39 164.9 145 58.6
MD01G1160000 Malus domestica HOM05D001518 ORTHO05D006498 6.4e-39 164.9 141 67.4
Cfa001256 Carpinus fangiana HOM05D001518 ORTHO05D006498 1.1e-38 164.1 179 50.8
Ah.16g104010 Amaranthus hybridus HOM05D001518 ORTHO05D006498 1.4e-38 163.7 168 53.0
MELO3C008325.2 Cucumis melo HOM05D001518 ORTHO05D006498 1.4e-38 163.7 145 57.9
Hma1.2p1_1687F.1_g297510 Hydrangea macrophylla HOM05D001518 ORTHO05D006498 1.4e-38 163.7 153 56.9
FAN10G1819 Fragaria x ananassa HOM05D001518 ORTHO05D006498 2.4e-38 162.9 196 58.7
Haze_17295 Corylus avellana HOM05D001518 ORTHO05D006498 4.2e-38 162.2 179 49.7
PSO384G4720 Papaver somniferum HOM05D001518 ORTHO05D006498 5.4e-38 161.8 147 60.5
Prupe.2G258000 Prunus persica HOM05D001518 ORTHO05D006498 5.4e-38 161.8 203 52.7
SGA_v2.0_scaffold44G16654 Striga asiatica HOM05D001518 ORTHO05D006498 5.4e-38 161.8 190 53.2
Hund15866 Selenicereus undatus HOM05D001518 ORTHO05D006498 1.2e-37 160.6 153 58.2
Sed0021910 Sechium edule HOM05D001518 ORTHO05D006498 4.6e-37 158.7 170 51.2
EL10Ac2g04913 Beta vulgaris HOM05D001518 ORTHO05D006498 7.9e-37 157.9 159 54.1
Sed0027098 Sechium edule HOM05D001518 ORTHO05D006498 7.9e-37 157.9 149 62.4
PSO339G3904 Papaver somniferum HOM05D001518 ORTHO05D006498 1.0e-36 157.5 165 64.2
RcHm_v2.0_Chr1g0371311 Rosa chinensis HOM05D001518 ORTHO05D006498 1.8e-36 156.8 143 65.0
CiPaw.01G302600 Carya illinoinensis HOM05D001518 ORTHO05D006498 2.3e-36 156.4 141 55.3
Duzib168G1941 Durio zibethinus HOM05D001518 ORTHO05D006498 3.0e-36 156.0 193 51.8
Thhalv10005804m.g Eutrema salsugineum HOM05D001518 ORTHO05D006498 5.1e-36 155.2 91 79.1
Sabra08G0055300 Salix brachista HOM05D001518 ORTHO05D006498 5.1e-36 155.2 142 65.5
AL5G37460 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 8.7e-36 154.5 91 78.0
AT3G56140 Arabidopsis thaliana HOM05D001518 ORTHO05D006498 8.7e-36 154.5 91 78.0
Lj6g0017401 Lotus japonicus HOM05D001518 ORTHO05D006498 8.7e-36 154.5 151 60.3
THA.LOC104810131 Tarenaya hassleriana HOM05D001518 ORTHO05D006498 8.7e-36 154.5 89 84.3
Carub.0005s2289 Capsella rubella HOM05D001518 ORTHO05D006498 1.5e-35 153.7 147 59.2
Phvul.001G247100 Phaseolus vulgaris HOM05D001518 ORTHO05D006498 1.9e-35 153.3 143 54.5
Sp4g22720 Schrenkiella parvula HOM05D001518 ORTHO05D006498 1.9e-35 153.3 91 79.1
A07p22800 Brassica napus HOM05D001518 ORTHO05D006498 2.5e-35 152.9 91 76.9
BraA07t29945Z Brassica rapa HOM05D001518 ORTHO05D006498 2.5e-35 152.9 91 76.9
ATR0594G213 Amborella trichopoda HOM05D001518 ORTHO05D006498 3.3e-35 152.5 151 62.9
C04p68170 Brassica napus HOM05D001518 ORTHO05D006498 3.3e-35 152.5 89 80.9
BolC4t28323H Brassica oleracea HOM05D001518 ORTHO05D006498 4.3e-35 152.1 89 80.9
Carub.0004s2264 Capsella rubella HOM05D001518 ORTHO05D006498 4.3e-35 152.1 91 79.1
Ca_15169_v3 Cicer arietinum L. HOM05D001518 ORTHO05D006498 4.3e-35 152.1 145 56.6
Thhalv10016304m.g Eutrema salsugineum HOM05D001518 ORTHO05D006498 4.3e-35 152.1 159 60.4
Medtr3g071970 Medicago truncatula HOM05D001518 ORTHO05D006498 4.3e-35 152.1 144 53.5
BcaC08g44762 Brassica carinata HOM05D001518 ORTHO05D006498 5.6e-35 151.8 91 75.8
A04p30770 Brassica napus HOM05D001518 ORTHO05D006498 5.6e-35 151.8 92 78.3
C06p23300 Brassica napus HOM05D001518 ORTHO05D006498 5.6e-35 151.8 91 75.8
BolC6t37503H Brassica oleracea HOM05D001518 ORTHO05D006498 5.6e-35 151.8 91 75.8
BraA04t18535Z Brassica rapa HOM05D001518 ORTHO05D006498 5.6e-35 151.8 92 78.3
AL4G38220 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 7.4e-35 151.4 91 76.9
CARHR135480 Cardamine hirsuta HOM05D001518 ORTHO05D006498 7.4e-35 151.4 94 75.5
AT2G40400 Arabidopsis thaliana HOM05D001518 ORTHO05D006498 9.6e-35 151.0 91 76.9
Thecc.09G230400 Theobroma cacao HOM05D001518 ORTHO05D006498 9.6e-35 151.0 91 75.8
TPR.G29216 Trifolium pratense HOM05D001518 ORTHO05D006498 1.3e-34 150.6 143 55.2
VMungo1383G3076 Vigna mungo HOM05D001518 ORTHO05D006498 1.3e-34 150.6 143 53.8
Sp5g06390 Schrenkiella parvula HOM05D001518 ORTHO05D006498 2.8e-34 149.4 91 74.7
Aa31LG5G19180 Aethionema arabicum HOM05D001518 ORTHO05D006498 3.7e-34 149.1 94 72.3
arahy.Tifrunner.gnm1.ann1.1N0RH8 Arachis hypogaea HOM05D001518 ORTHO05D006498 3.7e-34 149.1 174 47.7
Gohir.A07G124600 Gossypium hirsutum HOM05D001518 ORTHO05D006498 3.7e-34 149.1 94 74.5
Psat5g126120 Pisum sativum HOM05D001518 ORTHO05D006498 3.7e-34 149.1 147 54.4
Atru.chr12.119 Acer truncatum HOM05D001518 ORTHO05D006498 4.8e-34 148.7 84 81.0
Aa31LG10G11040 Aethionema arabicum HOM05D001518 ORTHO05D006498 4.8e-34 148.7 91 75.8
arahy.Tifrunner.gnm1.ann1.73F65L Arachis hypogaea HOM05D001518 ORTHO05D006498 4.8e-34 148.7 174 47.1
BcaB02g07667 Brassica carinata HOM05D001518 ORTHO05D006498 6.2e-34 148.3 92 76.1
Gorai.001G139200 Gossypium raimondii HOM05D001518 ORTHO05D006498 1.4e-33 147.1 201 51.7
Lalb_Chr08g0231381 Lupinus albus HOM05D001518 ORTHO05D006498 1.8e-33 146.7 141 61.7
CDE07G0354 Ceratophyllum demersum HOM05D001518 ORTHO05D006498 5.3e-33 145.2 90 75.6
COL.COLO4_24867 Corchorus olitorius HOM05D001518 ORTHO05D006498 5.3e-33 145.2 87 77.0
Gohir.D07G128900 Gossypium hirsutum HOM05D001518 ORTHO05D006498 5.3e-33 145.2 94 72.3
Glyma.18G023200 Glycine max HOM05D001518 ORTHO05D006498 9.0e-33 144.4 154 56.5
Glyma.11G233800 Glycine max HOM05D001518 ORTHO05D006498 3.4e-32 142.5 153 56.2
Eucgr.J00163 Eucalyptus grandis HOM05D001518 ORTHO05D006498 1.7e-31 140.2 87 72.4
Lalb_Chr11g0075101 Lupinus albus HOM05D001518 ORTHO05D006498 2.2e-31 139.8 91 73.6
Cpa.g.sc19.113 Carica papaya HOM05D001518 ORTHO05D006498 6.4e-31 138.3 83 78.3
Peaxi162Scf00284g00235 Petunia axillaris HOM05D001518 ORTHO05D006498 2.1e-29 133.3 144 59.7
HPP92_019734 Vanilla planifolia HOM05D001518 ORTHO05D006498 3.9e-28 129.0 199 45.2
Os01g0826900 Oryza sativa ssp. japonica HOM05D001518 ORTHO05D006498 6.7e-28 128.3 93 66.7
FAN01G2884 Fragaria x ananassa HOM05D001518 ORTHO05D006498 1.6e-26 123.6 73 79.5
Zm00001eb149270 Zea mays HOM05D001518 ORTHO05D006498 2.1e-26 123.2 85 69.4
SMO164G0201 Selaginella moellendorffii HOM05D001518 ORTHO05D006498 7.6e-24 114.8 91 53.8
Zm00001eb351960 Zea mays HOM05D001518 ORTHO05D006498 2.2e-23 113.2 152 44.1
Pp3c3_35080 Physcomitrium patens HOM05D001518 ORTHO05D006498 4.9e-23 112.1 87 58.6
AagrBONN_evm.TU.Sc2ySwM_228.3192 Anthoceros agrestis HOM05D001518 ORTHO05D006498 3.2e-22 109.4 84 58.3
Pp3c8_1750 Physcomitrium patens HOM05D001518 ORTHO05D006498 3.2e-22 109.4 87 56.3
HPP92_019705 Vanilla planifolia HOM05D001518 ORTHO05D006498 1.2e-21 107.5 189 42.9
Mapoly0059s0064 Marchantia polymorpha HOM05D001518 ORTHO05D006498 3.5e-21 105.9 84 57.1
AL1G44650 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 1.8e-20 103.6 62 77.4
AL4G11590 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 1.1e-19 100.9 62 74.2
GSVIVG01032735001 Vitis vinifera HOM05D001518 ORTHO05D006498 1.5e-19 100.5 59 81.4
Cc02_g05880 Coffea canephora HOM05D001518 ORTHO05D006498 6.9e-17 91.7 59 76.3
vmacro06911 Vaccinium macrocarpon HOM05D001518 ORTHO05D006498 4.5e-16 89.0 51 82.4
CBR_g38031 Chara braunii HOM05D001518 ORTHO05D006498 8.5e-15 84.7 87 47.1
SEGI_11999 Sequoiadendron giganteum HOM05D001518 ORTHO05D006498 4.2e-14 82.4 117 41.0
TAR636G0404 Trochodendron aralioides HOM05D001518 ORTHO05D006498 1.3e-10 70.9 41 75.6


User provided reference genes

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