Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 0.0e+00 1135.6 582 100.0
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 1.4e-278 962.6 591 82.7
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 6.3e-199 698.0 631 58.5
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 1.0e-188 664.1 622 57.6
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 2.2e-188 662.9 572 62.2
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 2.9e-188 662.5 622 55.8
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 6.7e-185 651.4 642 55.0
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 2.2e-183 646.4 604 54.5
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 2.8e-183 646.0 613 54.0
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 4.5e-181 638.6 624 52.7
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 1.3e-180 637.1 613 54.2
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 2.2e-180 636.3 622 53.9
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 2.9e-180 636.0 609 54.4
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 1.1e-179 634.0 588 54.6
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 3.6e-178 629.0 605 54.0
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.0e-177 627.5 618 53.1
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 4.0e-177 625.5 634 53.8
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 6.7e-177 624.8 613 53.7
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 2.0e-176 623.2 614 53.7
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 2.6e-176 622.9 554 58.3
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 3.3e-176 622.5 605 53.9
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 5.7e-176 621.7 616 53.6
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 2.2e-175 619.8 601 54.1
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 2.2e-175 619.8 619 54.3
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 2.2e-175 619.8 613 53.0
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 1.4e-174 617.1 618 52.8
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 4.1e-174 615.5 619 54.0
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 5.3e-174 615.1 619 52.0
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 5.3e-174 615.1 626 52.6
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 7.0e-174 614.8 616 52.9
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 9.1e-174 614.4 624 52.7
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 1.6e-173 613.6 621 52.7
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 2.0e-173 613.2 616 52.6
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 2.7e-173 612.8 560 55.4
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 4.5e-173 612.1 617 51.9
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 5.9e-173 611.7 624 52.2
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 5.9e-173 611.7 614 53.1
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 7.7e-173 611.3 605 52.6
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 7.7e-173 611.3 660 50.0
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 1.3e-172 610.5 627 51.0
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 1.7e-172 610.1 617 52.8
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 1.7e-172 610.1 618 52.4
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 5.0e-172 608.6 618 51.6
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 5.0e-172 608.6 613 51.7
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 8.5e-172 607.8 619 51.2
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 8.5e-172 607.8 476 64.1
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 8.5e-172 607.8 621 51.5
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 1.5e-171 607.1 615 52.2
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 1.9e-171 606.7 581 52.8
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.5e-171 606.3 652 49.7
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 2.5e-171 606.3 614 52.3
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 3.2e-171 605.9 620 51.8
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 4.2e-171 605.5 613 51.5
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 5.5e-171 605.1 624 52.1
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 9.4e-171 604.4 605 53.1
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 2.7e-170 602.8 629 51.7
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 1.0e-169 600.9 618 50.8
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 1.0e-169 600.9 622 52.9
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 1.4e-169 600.5 615 50.4
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 6.8e-169 598.2 588 52.0
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 8.8e-169 597.8 622 51.0
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 1.5e-168 597.0 622 51.3
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 2.0e-168 596.7 625 51.4
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 4.4e-168 595.5 587 52.5
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 9.8e-168 594.3 616 53.1
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 1.7e-167 593.6 589 51.6
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 4.8e-167 592.0 624 50.3
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 6.3e-167 591.7 615 50.2
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 4.1e-166 589.0 630 50.2
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 5.4e-166 588.6 618 50.0
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 1.2e-165 587.4 617 51.1
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.0e-165 586.6 594 53.4
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 4.5e-165 585.5 639 51.0
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.0e-164 584.3 519 56.8
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 1.0e-164 584.3 632 51.4
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 1.3e-164 583.9 573 52.4
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 1.3e-164 583.9 573 52.4
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 1.1e-163 580.9 576 53.3
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 3.2e-163 579.3 575 52.5
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 3.2e-163 579.3 575 52.5
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 3.2e-163 579.3 590 51.7
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 4.2e-163 578.9 577 52.5
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 7.2e-163 578.2 609 51.2
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 7.2e-163 578.2 622 49.8
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 9.5e-163 577.8 575 52.3
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 6.1e-162 575.1 479 61.4
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 8.0e-162 574.7 617 51.2
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 1.0e-161 574.3 621 49.9
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 6.8e-161 571.6 605 50.1
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 2.0e-160 570.1 586 52.9
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 2.6e-160 569.7 581 51.5
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 9.8e-160 567.8 605 49.3
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 6.3e-159 565.1 587 50.3
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 4.1e-158 562.4 513 57.3
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 2.3e-156 556.6 530 54.5
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 1.1e-155 554.3 628 47.8
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.1e-155 554.3 610 49.2
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 1.4e-153 547.4 626 47.9
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 8.9e-153 544.7 612 51.0
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 3.4e-152 542.7 527 54.3
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 8.3e-151 538.1 635 47.4
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 2.0e-149 533.5 583 48.0
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 2.7e-149 533.1 505 55.2
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 5.9e-149 531.9 618 46.9
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 1.9e-147 526.9 560 50.5
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 4.3e-147 525.8 505 52.5
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.1e-146 523.5 667 44.8
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 1.4e-145 520.8 585 48.0
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 8.9e-145 518.1 487 54.2
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 1.2e-144 517.7 626 46.2
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 2.0e-144 516.9 627 46.9
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 4.9e-143 512.3 572 48.6
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 4.9e-143 512.3 527 50.9
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 4.9e-143 512.3 561 50.1
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 6.4e-143 511.9 468 55.6
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 2.0e-141 506.9 601 47.4
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 5.0e-140 502.3 636 45.3
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 2.8e-138 496.5 508 51.6
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 2.6e-136 490.0 620 45.2
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 9.9e-136 488.0 587 46.5
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 6.4e-135 485.3 474 53.0
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 5.1e-132 475.7 516 49.8
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 8.9e-129 464.9 481 52.4
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 1.7e-127 460.7 459 52.3
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 2.9e-127 459.9 515 48.3
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 9.9e-120 434.9 427 53.6
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.9e-115 420.6 471 46.9
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.9e-115 420.6 471 46.9
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 9.6e-115 418.3 588 41.5
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 7.6e-112 408.7 449 49.7
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 2.4e-110 403.7 494 45.1
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 2.4e-110 403.7 596 38.8
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 7.4e-107 392.1 511 44.0
Thhalv10013820m.g Eutrema salsugineum HOM05D004604 ORTHO05D005744 5.1e-100 369.4 384 51.8
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 5.1e-100 369.4 467 44.1
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 6.5e-95 352.4 600 38.8
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 2.2e-90 337.4 610 37.9
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 2.4e-73 280.8 644 31.2
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 8.5e-71 272.3 501 33.5
HPP92_018034 Vanilla planifolia HOM05D004604 ORTHO05D005744 4.8e-58 229.9 277 44.8
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 3.2e-54 217.2 408 32.8
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea HOM05D004604 ORTHO05D005744 2.0e-51 208.0 338 38.8
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 7.2e-46 189.5 196 47.4
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 1.2e-37 162.2 111 64.9
Cfa022588 Carpinus fangiana HOM05D004604 ORTHO05D005744 5.8e-27 126.7 166 41.0
Peaxi162Scf01208g00156 Petunia axillaris HOM05D004604 ORTHO05D005744 3.3e-22 110.9 64 78.1
HPP92_018033 Vanilla planifolia HOM05D004604 ORTHO05D005744 1.7e-15 88.6 154 37.0
CBR_g49485 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-07 62.4 39 66.7
Oeu025172.2 Olea europaea HOM05D004604 ORTHO05D005744 5.1e-07 60.5 99 39.4


User provided reference genes

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