Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 0.0e+00 1182.9 608 100.0
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 2.1e-277 958.7 591 82.7
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 9.8e-203 710.7 604 62.3
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 6.1e-197 691.4 601 61.6
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 7.0e-193 677.9 626 57.7
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 1.7e-191 673.3 617 57.1
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 4.0e-188 662.1 626 55.0
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 8.9e-188 661.0 604 56.1
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 2.0e-187 659.8 626 57.5
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 1.8e-185 653.3 597 56.8
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 1.2e-184 650.6 626 54.3
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 1.0e-183 647.5 617 55.1
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 5.0e-183 645.2 626 54.8
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 2.5e-182 642.9 609 54.8
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 7.3e-182 641.3 613 55.0
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 1.2e-181 640.6 616 54.5
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 2.8e-181 639.4 557 60.0
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 5.2e-180 635.2 612 54.9
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 6.8e-180 634.8 616 55.5
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 1.5e-179 633.6 609 53.5
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.6e-179 632.9 611 54.2
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 3.4e-179 632.5 619 53.5
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 9.8e-179 630.9 623 53.6
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 1.3e-178 630.6 620 54.2
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 1.7e-178 630.2 620 54.0
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 4.9e-178 628.6 616 54.5
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 4.9e-178 628.6 622 53.5
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 1.4e-177 627.1 636 53.9
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 1.4e-177 627.1 653 52.8
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 3.2e-177 625.9 618 54.0
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 1.2e-176 624.0 609 54.5
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 2.7e-176 622.9 623 53.6
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 2.7e-176 622.9 644 53.9
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 6.0e-176 621.7 615 52.7
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 6.0e-176 621.7 614 53.6
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 7.8e-176 621.3 604 54.3
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 1.0e-175 620.9 626 51.8
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 1.3e-175 620.5 610 53.4
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 1.3e-175 620.5 620 53.1
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 5.0e-175 618.6 619 54.3
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 5.0e-175 618.6 623 53.6
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 5.0e-175 618.6 625 54.1
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 1.9e-174 616.7 628 52.2
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 2.5e-174 616.3 629 52.3
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 2.5e-174 616.3 648 51.7
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 3.3e-174 615.9 622 53.1
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 4.3e-174 615.5 584 53.8
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 4.3e-174 615.5 624 52.1
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 7.3e-174 614.8 649 52.5
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 1.2e-173 614.0 629 51.8
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 2.1e-173 613.2 632 52.5
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 2.8e-173 612.8 615 53.7
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 1.4e-172 610.5 627 50.4
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 1.8e-172 610.1 663 49.9
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 2.3e-172 609.8 616 53.2
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 3.1e-172 609.4 614 53.4
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 4.0e-172 609.0 656 50.2
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 1.2e-171 607.4 501 62.3
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 3.4e-171 605.9 626 52.4
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 9.9e-171 604.4 621 51.7
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 3.7e-170 602.4 627 50.7
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 6.4e-170 601.7 617 51.7
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 1.1e-169 600.9 632 51.9
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 1.4e-169 600.5 651 51.0
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 2.1e-168 596.7 623 53.0
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 7.8e-168 594.7 642 51.4
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 1.3e-167 594.0 619 52.2
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 5.1e-167 592.0 599 52.8
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 8.6e-167 591.3 597 51.8
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 8.6e-167 591.3 630 51.7
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.1e-166 590.9 567 55.0
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 1.2e-165 587.4 600 52.3
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 1.2e-165 587.4 605 51.1
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 2.8e-165 586.3 629 51.5
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 2.8e-165 586.3 621 52.0
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 1.1e-164 584.3 479 61.6
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 4.0e-164 582.4 594 52.4
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 4.0e-164 582.4 594 52.4
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 5.2e-164 582.0 592 52.5
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 5.2e-164 582.0 592 52.5
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 1.2e-163 580.9 594 52.2
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.0e-163 580.1 617 51.2
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 3.4e-163 579.3 608 50.0
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 4.4e-163 578.9 603 51.4
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 7.6e-163 578.2 634 49.2
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 1.3e-162 577.4 597 52.4
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 2.2e-162 576.6 599 51.9
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 8.4e-162 574.7 607 50.9
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 1.1e-161 574.3 553 55.7
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 1.4e-161 573.9 607 51.4
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 1.2e-160 570.9 621 50.2
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 3.0e-159 566.2 627 49.1
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 5.1e-159 565.5 596 51.5
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 8.7e-159 564.7 623 48.8
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 1.6e-157 560.5 591 52.1
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 4.7e-157 558.9 609 47.8
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 1.1e-156 557.8 622 51.3
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 9.0e-156 554.7 630 48.4
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 9.9e-155 551.2 552 53.3
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 6.0e-152 542.0 620 48.5
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 3.0e-151 539.7 526 53.8
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 1.3e-149 534.3 570 50.7
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 1.1e-148 531.2 646 46.3
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 9.0e-148 528.1 673 45.2
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 2.6e-147 526.6 550 51.6
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 2.6e-147 526.6 469 57.8
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 1.7e-146 523.9 568 50.0
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 4.2e-145 519.2 496 52.8
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 2.1e-144 516.9 627 45.9
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 3.5e-144 516.2 587 47.7
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 1.3e-143 514.2 602 48.5
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.8e-143 513.8 563 49.2
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 2.3e-143 513.5 587 47.9
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 2.5e-142 510.0 572 49.1
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 1.6e-141 507.3 620 46.9
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 2.1e-141 506.9 632 47.0
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 2.1e-141 506.9 566 48.9
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 1.5e-139 500.7 516 51.4
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 2.6e-139 500.0 591 48.1
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 2.4e-137 493.4 475 54.7
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 7.1e-137 491.9 618 46.3
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 1.4e-132 477.6 528 50.0
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 2.9e-130 469.9 482 52.7
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 1.9e-129 467.2 517 50.3
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 5.7e-126 455.7 462 52.4
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.4e-119 434.5 427 53.6
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.7e-114 417.5 473 46.9
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.7e-114 417.5 473 46.9
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 3.9e-111 406.4 602 39.7
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 1.1e-110 404.8 617 40.8
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 7.4e-110 402.1 465 49.7
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 1.8e-108 397.5 614 39.9
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 3.0e-103 380.2 531 43.5
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 2.0e-102 377.5 595 41.2
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 1.2e-96 358.2 501 42.5
Thhalv10013820m.g Eutrema salsugineum HOM05D004604 ORTHO05D005744 4.7e-96 356.3 392 50.5
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 2.2e-93 347.4 608 37.8
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 1.7e-74 284.6 540 33.9
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 9.8e-70 268.9 500 34.8
HPP92_018034 Vanilla planifolia HOM05D004604 ORTHO05D005744 1.1e-57 228.8 277 45.1
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 9.9e-54 215.7 412 32.0
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea HOM05D004604 ORTHO05D005744 2.5e-49 201.1 354 37.0
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 1.2e-46 192.2 196 47.4
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 2.5e-41 174.5 116 66.4
Cfa022588 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.8e-26 125.2 166 40.4
Peaxi162Scf01208g00156 Petunia axillaris HOM05D004604 ORTHO05D005744 4.5e-22 110.5 61 80.3
HPP92_018033 Vanilla planifolia HOM05D004604 ORTHO05D005744 3.9e-18 97.4 156 42.9
CDE04G1491 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 1.6e-08 65.5 49 57.1
CBR_g49485 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-07 62.8 39 64.1
Oeu025172.2 Olea europaea HOM05D004604 ORTHO05D005744 1.1e-07 62.8 126 35.7
SEGI_38081 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 5.9e-06 57.0 44 54.5


User provided reference genes

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