Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01305 Erythranthe guttata HOM05D001128 ORTHO05D000721 4.0e-159 564.7 284 100.0
MSTRG.8291 Avicennia marina HOM05D001128 ORTHO05D000721 7.6e-57 224.9 321 48.0
SalBow6G4034 Salvia bowleyana HOM05D001128 ORTHO05D000721 1.5e-41 174.1 357 41.7
SalBow6G5364 Salvia bowleyana HOM05D001128 ORTHO05D000721 2.6e-41 173.3 339 43.4
MSTRG.27358 Avicennia marina HOM05D001128 ORTHO05D000721 3.0e-29 133.3 320 35.6
SalBow5G3624 Salvia bowleyana HOM05D001128 ORTHO05D000721 2.2e-16 90.5 248 35.1
Migut.F00730 Erythranthe guttata HOM05D001128 ORTHO05D000721 9.4e-15 85.1 216 35.2
Nitab4.5_0000243g0040 Nicotiana tabacum HOM05D001128 ORTHO05D000721 9.4e-15 85.1 245 33.1
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 1.6e-14 84.3 169 42.0
Oeu035129.1 Olea europaea HOM05D001128 ORTHO05D000721 2.7e-14 83.6 254 35.0
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 2.6e-12 77.0 386 28.8
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 2.6e-12 77.0 389 27.0
GSVIVG01016431001 Vitis vinifera HOM05D001128 ORTHO05D000721 3.3e-12 76.6 226 33.2
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 7.4e-12 75.5 126 42.9
Ca_05916_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 2.8e-11 73.6 233 30.9
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 6.3e-11 72.4 215 32.1
Hma1.2p1_0026F.1_g016650 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 2.4e-10 70.5 428 25.5
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 5.3e-10 69.3 215 32.1
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 7.0e-10 68.9 211 32.2
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 1.2e-09 68.2 110 45.5
Oeu018987.1 Olea europaea HOM05D001128 ORTHO05D000721 1.6e-09 67.8 277 29.2
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 2.6e-09 67.0 110 46.4
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 4.5e-09 66.2 144 39.6
Nitab4.5_0002822g0050 Nicotiana tabacum HOM05D001128 ORTHO05D000721 7.7e-09 65.5 244 30.3
Cc02_g07190 Coffea canephora HOM05D001128 ORTHO05D000721 1.3e-08 64.7 240 33.3
Duzib114G0703 Durio zibethinus HOM05D001128 ORTHO05D000721 1.7e-08 64.3 124 42.7
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 5.0e-08 62.8 153 37.9
FAN03G2145 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.1e-07 61.6 381 26.5
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 1.9e-07 60.8 169 32.5
Actinidia02379 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.5e-07 60.5 133 32.3
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 3.2e-07 60.1 218 33.0
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 5.5e-07 59.3 274 30.3
arahy.Tifrunner.gnm1.ann1.1NAQ44 Arachis hypogaea HOM05D001128 ORTHO05D000721 7.2e-07 58.9 157 32.5
AUR62022804 Chenopodium quinoa HOM05D001128 ORTHO05D000721 7.2e-07 58.9 158 32.3
SGA_v2.0_scaffold94G28557 Striga asiatica HOM05D001128 ORTHO05D000721 9.4e-07 58.5 90 40.0
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 1.2e-06 58.2 88 45.5
TWI53G0706 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.2e-06 58.2 108 41.7
MSTRG.5621 Avicennia marina HOM05D001128 ORTHO05D000721 1.6e-06 57.8 206 29.1
Hma1.2p1_0039F.1_g024950 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.6e-06 57.8 273 27.8
Duzib106G0526 Durio zibethinus HOM05D001128 ORTHO05D000721 2.1e-06 57.4 119 37.8
Ciclev10031729m.g Citrus clementina HOM05D001128 ORTHO05D000721 2.7e-06 57.0 174 33.3
unitig_748.g6991 Utricularia gibba HOM05D001128 ORTHO05D000721 2.7e-06 57.0 268 28.0
arahy.Tifrunner.gnm1.ann1.U326PE Arachis hypogaea HOM05D001128 ORTHO05D000721 3.6e-06 56.6 157 32.5
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 3.6e-06 56.6 130 40.0
FAN10G3504 Fragaria x ananassa HOM05D001128 ORTHO05D000721 4.7e-06 56.2 227 31.7
Gohir.D04G065500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 4.7e-06 56.2 101 41.6
Lj1A945T19 Lonicera japonica HOM05D001128 ORTHO05D000721 4.7e-06 56.2 193 32.6
Psat2g036720 Pisum sativum HOM05D001128 ORTHO05D000721 6.1e-06 55.8 208 27.9
MD01G1142200 Malus domestica HOM05D001128 ORTHO05D000721 8.0e-06 55.5 87 43.7


User provided reference genes

Program Settings