Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01242 Erythranthe guttata HOM05D003589 ORTHO05D005170 1.6e-157 559.3 276 100.0
MSTRG.169 Avicennia marina HOM05D003589 ORTHO05D005170 2.9e-69 266.2 289 52.6
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 1.4e-47 194.1 292 40.4
SalBow5G5138 Salvia bowleyana HOM05D003589 ORTHO05D005170 4.5e-38 162.5 275 39.6
Lj8A54T74 Lonicera japonica HOM05D003589 ORTHO05D005170 3.3e-33 146.4 265 38.1
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 1.7e-32 144.1 244 36.1
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 4.1e-31 139.4 276 37.0
Cc02_g05350 Coffea canephora HOM05D003589 ORTHO05D005170 2.0e-30 137.1 222 39.2
Peaxi162Scf00167g01218 Petunia axillaris HOM05D003589 ORTHO05D005170 2.0e-30 137.1 236 39.0
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 2.2e-29 133.7 226 38.1
Sopen05g030750 Solanum pennellii HOM05D003589 ORTHO05D005170 3.8e-29 132.9 268 34.7
Cpa.g.sc19.55 Carica papaya HOM05D003589 ORTHO05D005170 6.5e-29 132.1 256 34.4
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.4e-28 131.0 277 34.3
Solyc05g052210.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 3.2e-28 129.8 238 35.7
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 1.2e-27 127.9 280 32.1
Manes.10G001600 Manihot esculenta HOM05D003589 ORTHO05D005170 4.7e-27 125.9 284 32.0
Oeu006056.1 Olea europaea HOM05D003589 ORTHO05D005170 8.0e-27 125.2 179 45.8
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 1.4e-26 124.4 218 37.2
Nitab4.5_0000375g0230 Nicotiana tabacum HOM05D003589 ORTHO05D005170 3.0e-26 123.2 245 35.1
PGSC0003DMG400011643 Solanum tuberosum HOM05D003589 ORTHO05D005170 5.2e-26 122.5 270 33.3
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 1.1e-25 121.3 227 37.0
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.1e-25 121.3 228 35.1
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.0e-25 120.6 228 34.6
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 2.6e-25 120.2 308 30.5
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 3.3e-25 119.8 227 36.1
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 3.3e-25 119.8 228 34.6
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 7.4e-25 118.6 206 35.9
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 7.4e-25 118.6 235 34.0
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.7e-24 117.5 291 31.6
DCAR_014664 Daucus carota HOM05D003589 ORTHO05D005170 1.7e-24 117.5 201 37.3
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 3.7e-24 116.3 227 33.0
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 1.1e-23 114.8 229 33.6
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.4e-23 113.6 255 32.5
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 4.1e-23 112.8 268 30.2
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 5.3e-23 112.5 265 33.6
DCAR_018039 Daucus carota HOM05D003589 ORTHO05D005170 7.0e-23 112.1 259 34.0
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 7.0e-23 112.1 228 35.5
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 1.2e-22 111.3 207 38.2
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 2.6e-22 110.2 178 36.0
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 2.6e-22 110.2 206 35.0
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 3.5e-22 109.8 233 33.5
Duzib114G0452 Durio zibethinus HOM05D003589 ORTHO05D005170 3.5e-22 109.8 220 34.1
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.5e-22 109.4 208 33.7
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 7.7e-22 108.6 210 35.7
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.7e-21 107.5 289 31.8
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 1.7e-21 107.5 210 35.7
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 2.2e-21 107.1 203 34.5
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 2.9e-21 106.7 241 30.7
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.8e-21 106.3 234 32.5
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 6.5e-21 105.5 209 33.5
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 8.5e-21 105.1 177 34.5
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 1.5e-20 104.4 232 32.3
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.5e-20 104.4 227 32.6
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 1.9e-20 104.0 210 34.8
MSTRG.5498 Avicennia marina HOM05D003589 ORTHO05D005170 2.5e-20 103.6 247 27.1
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.2e-20 103.2 234 32.5
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.2e-20 103.2 234 32.5
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.2e-20 103.2 234 32.5
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 7.2e-20 102.1 180 34.4
Oeu057998.1 Olea europaea HOM05D003589 ORTHO05D005170 1.2e-19 101.3 141 43.3
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 1.6e-19 100.9 217 33.2
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 2.7e-19 100.1 210 32.4
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 2.7e-19 100.1 218 30.3
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.6e-19 99.8 233 32.2
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 4.7e-19 99.4 234 30.8
Lsat_1_v5_gn_2_126280 Lactuca sativa HOM05D003589 ORTHO05D005170 4.7e-19 99.4 250 30.4
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 4.7e-19 99.4 228 32.0
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 4.7e-19 99.4 176 31.2
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 6.1e-19 99.0 210 32.4
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 8.0e-19 98.6 228 28.9
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 8.0e-19 98.6 228 28.9
Oeu044185.1 Olea europaea HOM05D003589 ORTHO05D005170 8.0e-19 98.6 96 51.0
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.0e-18 98.2 227 28.6
HanXRQChr07g0204121 Helianthus annuus HOM05D003589 ORTHO05D005170 1.8e-18 97.4 280 28.6
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.0e-18 96.7 200 33.0
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 3.0e-18 96.7 241 32.8
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 1.2e-17 94.7 178 38.8
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 1.2e-17 94.7 250 30.8
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 1.5e-17 94.4 231 31.6
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 3.3e-17 93.2 182 35.7
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 4.4e-17 92.8 182 31.3
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 7.5e-17 92.0 236 30.5
Migut.J00036 Erythranthe guttata HOM05D003589 ORTHO05D005170 7.5e-17 92.0 246 27.6
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 9.7e-17 91.7 229 31.0
Gohir.D04G012700 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.7e-16 90.9 234 26.9
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 3.7e-16 89.7 219 29.7
CANSAT56G1879 Cannabis sativa HOM05D003589 ORTHO05D005170 3.7e-16 89.7 249 28.1
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 3.7e-16 89.7 197 33.0
Eucgr.A00727 Eucalyptus grandis HOM05D003589 ORTHO05D005170 4.8e-16 89.4 226 31.0
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 6.3e-16 89.0 235 27.7
Gorai.012G015000 Gossypium raimondii HOM05D003589 ORTHO05D005170 1.8e-15 87.4 229 28.4
HPP92_015592 Vanilla planifolia HOM05D003589 ORTHO05D005170 2.4e-15 87.0 253 30.4
Gohir.A05G402800 Gossypium hirsutum HOM05D003589 ORTHO05D005170 3.1e-15 86.7 234 27.8
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 4.1e-15 86.3 245 29.4
AUR62006418 Chenopodium quinoa HOM05D003589 ORTHO05D005170 7.0e-15 85.5 250 27.6
ECA238G2532 Erigeron canadensis HOM05D003589 ORTHO05D005170 7.0e-15 85.5 175 33.1
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 2.0e-14 84.0 174 31.0
ECA247G3378 Erigeron canadensis HOM05D000259 ORTHO05D000155 2.0e-14 84.0 131 38.2
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 4.5e-14 82.8 149 32.9
Carub.0005s1794 Capsella rubella HOM05D003589 ORTHO05D005170 2.2e-13 80.5 201 35.3
Lsat_1_v5_gn_9_38921 Lactuca sativa HOM05D003589 ORTHO05D005170 2.9e-13 80.1 118 39.8
HanXRQChr10g0287531 Helianthus annuus HOM05D003589 ORTHO05D005170 5.0e-13 79.3 103 40.8
BcaC06g33027 Brassica carinata HOM05D003589 ORTHO05D005170 2.5e-12 77.0 178 34.3
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 2.5e-12 77.0 167 34.1
AL5G32020 Arabidopsis lyrata HOM05D003589 ORTHO05D005170 5.5e-12 75.9 200 34.5
AT3G51580 Arabidopsis thaliana HOM05D003589 ORTHO05D005170 5.5e-12 75.9 206 34.5
Sp5g10690 Schrenkiella parvula HOM05D003589 ORTHO05D005170 5.5e-12 75.9 201 31.3
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 5.5e-12 75.9 159 32.1
Thhalv10010441m.g Eutrema salsugineum HOM05D003589 ORTHO05D005170 1.6e-11 74.3 198 32.3
unitig_578.g15914 Utricularia gibba HOM05D003589 ORTHO05D005170 3.6e-11 73.2 202 28.7
CARHR161170 Cardamine hirsuta HOM05D003589 ORTHO05D005170 8.0e-11 72.0 216 30.6
Os05g0478200 Oryza sativa ssp. japonica HOM05D003589 ORTHO05D005170 2.3e-10 70.5 203 27.1
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.5e-09 67.8 229 27.5
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 2.0e-09 67.4 241 26.1
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 7.5e-09 65.5 248 25.4
Oeu060212.1 Olea europaea HOM05D003589 ORTHO05D005170 2.2e-08 63.9 96 44.8
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 8.3e-08 62.0 250 27.2
Manes.08G171100 Manihot esculenta HOM05D003589 ORTHO05D005170 2.0e-06 57.4 221 23.5


User provided reference genes

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