Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01235 Erythranthe guttata HOM05D001750 ORTHO05D001825 1.7e-38 162.2 81 100.0
SalBow1G5977 Salvia bowleyana HOM05D001750 ORTHO05D001825 1.6e-36 155.6 78 100.0
unitig_87.g28030 Utricularia gibba HOM05D001750 ORTHO05D001825 1.6e-36 155.6 78 100.0
SGA_v2.0_scaffold245G44452 Striga asiatica HOM05D001750 ORTHO05D001825 6.1e-36 153.7 76 100.0
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
Lj2A1235G104 Lonicera japonica HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
Lj2C1233T24 Lonicera japonica HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
Phvul.005G088400 Phaseolus vulgaris HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
Solyc00g500098.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
Solyc00g500169.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
Solyc00g500271.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
Solyc00g500317.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
VMungo0329G0001 Vigna mungo HOM05D001750 ORTHO05D001825 8.0e-36 153.3 78 98.7
Lalb_Chr17g0337371 Lupinus albus HOM05D001750 ORTHO05D001825 1.8e-35 152.1 78 97.4
Cfa005537 Carpinus fangiana HOM05D001750 ORTHO05D001825 3.0e-35 151.4 76 98.7
Cfa022996 Carpinus fangiana HOM05D001750 ORTHO05D001825 3.0e-35 151.4 76 98.7
Atru.chr9.151 Acer truncatum HOM05D001750 ORTHO05D001825 4.0e-35 151.0 78 97.4
CDE02G3422 Ceratophyllum demersum HOM05D001750 ORTHO05D001825 4.0e-35 151.0 78 97.4
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 4.0e-35 151.0 78 97.4
Nn117s43413 Nelumbo nucifera HOM05D001750 ORTHO05D001825 4.0e-35 151.0 78 97.4
Nn1g10108 Nelumbo nucifera HOM05D001750 ORTHO05D001825 4.0e-35 151.0 78 97.4
Nn1g10194 Nelumbo nucifera HOM05D001750 ORTHO05D001825 4.0e-35 151.0 78 97.4
Sed0023702 Sechium edule HOM05D001750 ORTHO05D001825 4.0e-35 151.0 78 97.4
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 5.2e-35 150.6 78 97.4
LjContig00315g0010666 Lotus japonicus HOM05D001750 ORTHO05D001825 6.8e-35 150.2 76 97.4
SabraMtG0002600 Salix brachista HOM05D001750 ORTHO05D001825 6.8e-35 150.2 76 97.4
Ah.10g027940 Amaranthus hybridus HOM05D001750 ORTHO05D001825 1.2e-34 149.4 78 96.2
Ah.10g028650 Amaranthus hybridus HOM05D001750 ORTHO05D001825 1.2e-34 149.4 78 96.2
AUR62042331 Chenopodium quinoa HOM05D001750 ORTHO05D001825 1.2e-34 149.4 78 96.2
FAN14G0206 Fragaria x ananassa HOM05D001750 ORTHO05D001825 1.2e-34 149.4 78 96.2
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 1.5e-34 149.1 76 97.4
MBI06_g25391_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 1.5e-34 149.1 76 97.4
arahy.Tifrunner.gnm1.ann1.B33B9N Arachis hypogaea HOM05D001750 ORTHO05D001825 2.0e-34 148.7 78 94.9
FvH4_c1g00470 Fragaria vesca HOM05D001750 ORTHO05D001825 2.0e-34 148.7 78 96.2
FAN14G4205 Fragaria x ananassa HOM05D001750 ORTHO05D001825 2.0e-34 148.7 78 96.2
RcHm_v2.0_MTg0498221 Rosa chinensis HOM05D001750 ORTHO05D001825 2.0e-34 148.7 78 96.2
Hund27692 Selenicereus undatus HOM05D001750 ORTHO05D001825 2.0e-34 148.7 78 94.9
Hund29041 Selenicereus undatus HOM05D001750 ORTHO05D001825 2.0e-34 148.7 78 94.9
Hund31001 Selenicereus undatus HOM05D001750 ORTHO05D001825 2.0e-34 148.7 78 94.9
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 2.6e-34 148.3 78 96.2
Lalb_Chr02g0153721 Lupinus albus HOM05D001750 ORTHO05D001825 2.6e-34 148.3 78 94.9
Zm00001eb437920 Zea mays HOM05D001750 ORTHO05D001825 2.6e-34 148.3 78 96.2
Zm00001eb439010 Zea mays HOM05D001750 ORTHO05D001825 2.6e-34 148.3 78 96.2
SHI48909 Sapria himalayana HOM05D001750 ORTHO05D001825 3.4e-34 147.9 78 92.3
Cpa.g.sc900.3 Carica papaya HOM05D001750 ORTHO05D001825 4.4e-34 147.5 78 94.9
ATMG00513 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 7.5e-34 146.7 76 96.1
CAN.G134.25 Capsicum annuum HOM05D001750 ORTHO05D001825 7.5e-34 146.7 78 94.9
Glyma.15G187800 Glycine max HOM05D001750 ORTHO05D001825 7.5e-34 146.7 76 96.1
Aa31sc483G10 Aethionema arabicum HOM05D001750 ORTHO05D001825 1.3e-33 146.0 78 93.6
Sp3g25940 Schrenkiella parvula HOM05D001750 ORTHO05D001825 1.3e-33 146.0 78 93.6
BraSC77t46633Z Brassica rapa HOM05D001750 ORTHO05D001825 1.7e-33 145.6 77 93.5
Glyma.15G187600 Glycine max HOM05D001750 ORTHO05D001825 2.2e-33 145.2 76 94.7
BolSC28t60406H Brassica oleracea HOM05D001750 ORTHO05D001825 4.9e-33 144.1 76 93.4
BolSC28t60420H Brassica oleracea HOM05D001750 ORTHO05D001825 4.9e-33 144.1 76 93.4
Nitab4.5_0000593g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.1e-32 142.9 76 94.7
Ah.02g118860 Amaranthus hybridus HOM05D001750 ORTHO05D001825 4.1e-32 141.0 78 92.3
SHI35585 Sapria himalayana HOM05D001750 ORTHO05D001825 5.4e-32 140.6 76 86.8
TPR.G28320 Trifolium pratense HOM05D001750 ORTHO05D001825 1.6e-31 139.0 69 100.0
arahy.Tifrunner.gnm1.ann1.MYM2HE Arachis hypogaea HOM05D001750 ORTHO05D012795 4.5e-31 137.5 72 94.4
PSO017G5352 Papaver somniferum HOM05D001750 ORTHO05D001825 4.5e-31 137.5 78 88.5
Zm00001eb384430 Zea mays HOM05D001750 ORTHO05D001825 4.5e-31 137.5 71 97.2
Zm00001eb442540 Zea mays HOM05D001750 ORTHO05D001825 4.5e-31 137.5 71 97.2
Migut.J01211 Erythranthe guttata HOM05D001750 ORTHO05D001825 1.1e-29 132.9 78 88.5
Nitab4.5_0000085g0160 Nicotiana tabacum HOM05D001750 ORTHO05D001825 5.6e-29 130.6 76 88.2
SHI09895 Sapria himalayana HOM05D001750 ORTHO05D001825 2.8e-28 128.3 76 82.9
Zm00001eb384490 Zea mays HOM05D001750 ORTHO05D001825 3.6e-28 127.9 66 97.0
Zm00001eb438010 Zea mays HOM05D001750 ORTHO05D001825 3.6e-28 127.9 66 97.0
Zm00001eb440820 Zea mays HOM05D001750 ORTHO05D001825 3.6e-28 127.9 66 97.0
Solyc10g062020.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 8.0e-28 126.7 77 83.1
Nitab4.5_0001152g0320 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.8e-24 115.5 76 81.6
Migut.O00324 Erythranthe guttata HOM05D001750 ORTHO05D001825 2.4e-24 115.2 62 91.9
Nitab4.5_0000172g0100 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.3e-22 109.4 66 86.4
Nitab4.5_0001788g0240 Nicotiana tabacum HOM05D001750 ORTHO05D001825 5.8e-18 94.0 48 97.9
Potri.015G051300 Populus trichocarpa HOM05D001750 ORTHO05D001825 7.8e-15 83.6 48 89.6
CSS0000875 Camellia sinensis var. sinensis HOM05D001750 ORTHO05D001825 2.5e-13 78.6 42 92.9
Nitab4.5_0000172g2270 Nicotiana tabacum HOM05D001750 ORTHO05D012795 9.5e-13 76.6 44 86.4
SHI16092 Sapria himalayana HOM05D001750 ORTHO05D001825 1.1e-11 73.2 63 58.7
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 2.6e-10 68.6 76 43.4
Nn117s43418 Nelumbo nucifera HOM05D001750 ORTHO05D001825 4.4e-10 67.8 33 100.0
Nn1g10189 Nelumbo nucifera HOM05D001750 ORTHO05D001825 4.4e-10 67.8 33 100.0
Gohir.A09G068300 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.2e-09 65.5 33 93.9
SMO053G0013 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 1.7e-06 55.8 75 45.3
Hund29121 Selenicereus undatus HOM05D001750 ORTHO05D001825 3.9e-06 54.7 26 100.0


User provided reference genes

Program Settings