Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 2.4e-90 335.5 170 100.0
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 5.9e-65 251.1 163 81.0
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 6.4e-51 204.5 168 64.3
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 2.0e-49 199.5 170 61.2
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 5.9e-49 198.0 172 62.8
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 1.7e-48 196.4 167 62.3
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 1.7e-48 196.4 167 62.9
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 2.3e-48 196.1 169 60.9
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 2.3e-48 196.1 164 65.2
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 3.0e-48 195.7 169 62.7
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 5.0e-48 194.9 169 61.5
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 5.0e-48 194.9 167 63.5
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 8.6e-48 194.1 183 60.7
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 1.1e-47 193.7 184 57.1
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 1.5e-47 193.4 168 63.7
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 1.9e-47 193.0 172 61.6
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 3.3e-47 192.2 172 61.6
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 5.6e-47 191.4 174 60.9
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 7.3e-47 191.0 172 60.5
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 2.1e-46 189.5 172 59.9
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 3.6e-46 188.7 169 61.5
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 4.7e-46 188.3 169 60.4
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.7e-46 188.3 168 61.9
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 4.7e-46 188.3 169 59.2
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 6.2e-46 188.0 169 60.9
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 6.2e-46 188.0 169 60.9
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 6.2e-46 188.0 166 60.8
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 6.2e-46 188.0 166 59.6
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 8.0e-46 187.6 166 60.2
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 8.0e-46 187.6 163 62.6
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 1.0e-45 187.2 178 57.9
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 1.4e-45 186.8 169 59.8
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 6.8e-45 184.5 165 61.8
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 8.9e-45 184.1 175 55.4
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 8.9e-45 184.1 166 60.8
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 1.2e-44 183.7 168 58.3
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 1.2e-44 183.7 168 60.7
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.5e-44 183.3 171 55.6
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 2.0e-44 183.0 173 57.8
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 2.6e-44 182.6 164 59.1
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 2.6e-44 182.6 162 60.5
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 5.8e-44 181.4 174 58.6
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 7.5e-44 181.0 167 56.9
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 7.5e-44 181.0 178 57.3
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 9.8e-44 180.6 169 58.0
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 1.3e-43 180.3 168 58.3
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 2.2e-43 179.5 159 61.0
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 3.7e-43 178.7 172 58.1
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 8.3e-43 177.6 165 57.0
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 8.3e-43 177.6 172 54.7
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 8.3e-43 177.6 172 54.7
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 1.1e-42 177.2 167 60.5
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 1.4e-42 176.8 181 57.5
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 1.4e-42 176.8 160 58.8
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 1.9e-42 176.4 172 54.1
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 1.9e-42 176.4 185 54.6
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.9e-42 176.4 173 56.1
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 2.4e-42 176.0 172 54.1
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 3.2e-42 175.6 171 59.1
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 5.4e-42 174.9 173 53.2
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 7.0e-42 174.5 173 53.2
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 7.0e-42 174.5 174 52.3
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 7.0e-42 174.5 172 55.2
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.6e-41 173.3 173 56.1
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 2.0e-41 172.9 168 56.5
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 3.5e-41 172.2 175 53.1
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 3.5e-41 172.2 177 55.9
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 6.0e-41 171.4 174 54.0
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 1.0e-40 170.6 175 50.9
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 2.3e-40 169.5 167 57.5
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 5.0e-40 168.3 178 54.5
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 6.6e-40 167.9 158 57.6
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 1.9e-39 166.4 175 52.0
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 1.9e-39 166.4 166 56.0
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 2.5e-39 166.0 178 50.0
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 2.5e-39 166.0 170 57.6
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 3.3e-39 165.6 168 54.8
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 3.3e-39 165.6 169 55.6
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 5.6e-39 164.9 175 51.4
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 5.6e-39 164.9 169 49.1
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 7.3e-39 164.5 166 57.8
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 1.6e-38 163.3 169 56.2
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 2.1e-38 162.9 168 50.6
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 2.1e-38 162.9 171 54.4
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 3.6e-38 162.2 155 59.4
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 4.7e-38 161.8 178 53.4
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.8e-37 159.8 240 43.8
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 4.0e-37 158.7 136 64.0
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 5.2e-37 158.3 176 52.8
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 1.2e-36 157.1 158 53.8
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 1.5e-36 156.8 169 53.8
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 7.5e-36 154.5 162 52.5
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 4.9e-35 151.8 176 49.4
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 1.1e-34 150.6 168 50.0
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 2.4e-34 149.4 132 60.6
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 4.1e-34 148.7 162 51.2
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 4.1e-34 148.7 177 50.8
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 4.1e-34 148.7 163 47.2
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 5.4e-34 148.3 177 48.6
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 5.4e-34 148.3 177 48.6
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 7.1e-34 147.9 186 49.5
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 1.6e-33 146.7 170 50.0
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 3.5e-33 145.6 175 48.6
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 7.8e-33 144.4 187 50.8
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 1.0e-32 144.1 162 51.9
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.0e-32 144.1 167 53.3
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 1.7e-32 143.3 122 59.0
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 3.9e-32 142.1 176 46.0
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 8.6e-32 141.0 135 53.3
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 3.3e-31 139.0 133 54.1
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 4.3e-31 138.7 154 53.9
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 1.2e-30 137.1 112 64.3
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 2.8e-30 136.0 170 45.3
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 2.8e-30 136.0 132 53.0
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 2.8e-30 136.0 103 68.0
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 3.6e-30 135.6 170 49.4
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 4.7e-30 135.2 112 63.4
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.4e-29 133.7 129 54.3
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 1.4e-29 133.7 106 66.0
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 2.3e-29 132.9 106 66.0
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 3.1e-29 132.5 178 46.1
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 3.8e-27 125.6 167 44.9
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 1.1e-26 124.0 106 63.2
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 1.6e-25 120.2 181 42.5
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 2.7e-25 119.4 80 75.0
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 4.6e-25 118.6 106 60.4
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 7.8e-25 117.9 185 40.0
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 5.6e-23 111.7 128 52.3
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 2.2e-19 99.8 76 65.8
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 1.1e-18 97.4 107 53.3
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 1.9e-18 96.7 108 54.6
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 3.6e-14 82.4 102 45.1
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 3.6e-14 82.4 102 45.1
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 3.1e-13 79.3 96 46.9
Cre03.g155800 Chlamydomonas reinhardtii HOM05D004876 ORTHO05D005488 9.9e-12 74.3 111 37.8
MCO11G196 Micromonas commoda HOM05D004876 ORTHO05D005488 5.4e-10 68.6 116 32.8
Nitab4.5_0001671g0020 Nicotiana tabacum HOM05D004876 ORTHO05D005488 2.7e-09 66.2 67 52.2
AL4G14440 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 1.0e-08 64.3 62 48.4
Oeu039385.1 Olea europaea HOM05D002276 ORTHO05D002381 2.3e-08 63.2 66 54.5
Actinidia31636 Actinidia chinensis HOM05D004876 ORTHO05D005488 1.3e-06 57.4 133 33.1


User provided reference genes

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