Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01160 Erythranthe guttata HOM05D005135 ORTHO05D005810 1.2e-128 463.4 262 100.0
MSTRG.8780 Avicennia marina HOM05D005135 ORTHO05D005810 6.7e-84 314.7 269 68.8
SGA_v2.0_scaffold10G05426 Striga asiatica HOM05D005135 ORTHO05D005810 5.3e-81 305.1 264 70.1
unitig_52.g17751 Utricularia gibba HOM05D005135 ORTHO05D005810 1.0e-79 300.8 255 68.6
vmacro09870 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 2.9e-79 299.3 255 69.4
Hma1.2p1_0488F.1_g163940 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 5.0e-79 298.5 250 69.6
Peaxi162Scf00557g00212 Petunia axillaris HOM05D005135 ORTHO05D005810 1.9e-78 296.6 259 70.3
Thecc.03G166900 Theobroma cacao HOM05D005135 ORTHO05D005810 9.4e-78 294.3 254 68.5
Oeu030142.1 Olea europaea HOM05D005135 ORTHO05D005810 1.2e-77 293.9 257 67.3
Dinv35139 Davidia involucrata HOM05D005135 ORTHO05D005810 1.6e-77 293.5 250 69.2
Oeu022533.1 Olea europaea HOM05D005135 ORTHO05D005810 1.6e-77 293.5 253 68.4
CiPaw.03G100200 Carya illinoinensis HOM05D005135 ORTHO05D005810 1.4e-76 290.4 249 67.9
Solyc11g072300.2 Solanum lycopersicum HOM05D005135 ORTHO05D005810 1.4e-76 290.4 257 68.5
Sopen11g029970 Solanum pennellii HOM05D005135 ORTHO05D005810 1.4e-76 290.4 257 68.9
Actinidia31800 Actinidia chinensis HOM05D005135 ORTHO05D005810 2.3e-76 289.7 255 68.6
Solyc03g006850.3 Solanum lycopersicum HOM05D005135 ORTHO05D005810 3.0e-76 289.3 249 68.7
PGSC0003DMG400027379 Solanum tuberosum HOM05D005135 ORTHO05D005810 3.9e-76 288.9 259 68.0
Oeu030256.1 Olea europaea HOM05D005135 ORTHO05D005810 1.1e-75 287.3 254 69.7
Sopen03g002840 Solanum pennellii HOM05D005135 ORTHO05D005810 1.1e-75 287.3 249 68.3
Nitab4.5_0000205g0180 Nicotiana tabacum HOM05D005135 ORTHO05D005810 2.0e-75 286.6 255 68.6
CAN.G1187.4 Capsicum annuum HOM05D005135 ORTHO05D005810 2.6e-75 286.2 255 67.5
Nitab4.5_0001573g0020 Nicotiana tabacum HOM05D005135 ORTHO05D005810 2.6e-75 286.2 247 68.8
CAN.G1182.3 Capsicum annuum HOM05D005135 ORTHO05D005810 3.3e-75 285.8 250 67.6
FAN01G0847 Fragaria x ananassa HOM05D005135 ORTHO05D005810 3.3e-75 285.8 252 67.1
SGA_v2.0_scaffold303G47872 Striga asiatica HOM05D005135 ORTHO05D005810 4.4e-75 285.4 305 61.0
Duzib068G0893 Durio zibethinus HOM05D005135 ORTHO05D005810 9.7e-75 284.3 252 66.7
GSVIVG01018448001 Vitis vinifera HOM05D005135 ORTHO05D005810 2.8e-74 282.7 252 66.3
Duzib084G0614 Durio zibethinus HOM05D005135 ORTHO05D005810 4.8e-74 282.0 255 65.5
Gorai.008G281800 Gossypium raimondii HOM05D005135 ORTHO05D005810 4.8e-74 282.0 254 66.5
Gohir.D12G262900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 6.3e-74 281.6 253 66.4
Manes.14G031000 Manihot esculenta HOM05D005135 ORTHO05D005810 6.3e-74 281.6 252 65.9
Gohir.A12G262200 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.1e-73 280.8 254 66.5
Eucgr.K00188 Eucalyptus grandis HOM05D005135 ORTHO05D005810 2.4e-73 279.6 262 63.4
Potri.015G135000 Populus trichocarpa HOM05D005135 ORTHO05D005810 5.3e-73 278.5 256 66.0
CSS0048110 Camellia sinensis var. sinensis HOM05D005135 ORTHO05D005810 2.6e-72 276.2 249 65.9
Gohir.D08G104900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 2.2e-71 273.1 271 62.7
FAN06G3133 Fragaria x ananassa HOM05D005135 ORTHO05D005810 3.8e-71 272.3 250 64.8
PSO782G0956 Papaver somniferum HOM05D005135 ORTHO05D005810 3.8e-71 272.3 249 66.7
RcHm_v2.0_Chr1g0376221 Rosa chinensis HOM05D005135 ORTHO05D005810 3.8e-71 272.3 250 65.2
FAN06G4903 Fragaria x ananassa HOM05D005135 ORTHO05D005810 8.5e-71 271.2 250 64.4
ClCG05G007690 Citrullus lanatus HOM05D005135 ORTHO05D005810 1.5e-70 270.4 251 65.3
Sed0024541 Sechium edule HOM05D005135 ORTHO05D005810 2.5e-70 269.6 250 65.2
FAN03G3482 Fragaria x ananassa HOM05D005135 ORTHO05D005810 4.2e-70 268.9 254 63.8
FAN10G2880 Fragaria x ananassa HOM05D005135 ORTHO05D005810 4.2e-70 268.9 287 58.5
MELO3C006858.2 Cucumis melo HOM05D005135 ORTHO05D005810 5.5e-70 268.5 252 65.9
EL10Ac3g05742 Beta vulgaris HOM05D005135 ORTHO05D005810 2.7e-69 266.2 250 62.8
TAR629G2517 Trochodendron aralioides HOM05D005135 ORTHO05D005810 4.7e-69 265.4 272 61.8
CsaV3_3G016630 Cucumis sativus L. HOM05D005135 ORTHO05D005810 6.1e-69 265.0 252 65.1
CDE07G1455 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 8.0e-69 264.6 252 61.9
FvH4_7g28720 Fragaria vesca HOM05D005135 ORTHO05D005810 8.0e-69 264.6 244 64.3
HanXRQChr14g0461821 Helianthus annuus HOM05D005135 ORTHO05D005810 8.0e-69 264.6 238 66.0
A03p16010 Brassica napus HOM05D005135 ORTHO05D005810 1.4e-68 263.8 248 65.7
VMungo0720G1039 Vigna mungo HOM05D005135 ORTHO05D005810 2.3e-68 263.1 253 62.8
Nn1g01287 Nelumbo nucifera HOM05D005135 ORTHO05D005810 6.8e-68 261.5 264 59.8
Aqoxy7G00498 Aquilegia oxysepala HOM05D005135 ORTHO05D005810 8.8e-68 261.2 265 62.6
TWI23G0093 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 8.8e-68 261.2 246 64.2
Phvul.007G065300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 1.5e-67 260.4 253 62.8
BcaC01g06140 Brassica carinata HOM05D005135 ORTHO05D005810 2.6e-67 259.6 244 64.3
Gohir.A08G093700 Gossypium hirsutum HOM05D005135 ORTHO05D005810 3.4e-67 259.2 253 62.8
BolC3t14274H Brassica oleracea HOM05D005135 ORTHO05D005810 5.7e-67 258.5 246 64.2
C03p18840 Brassica napus HOM05D005135 ORTHO05D005810 7.5e-67 258.1 244 63.9
Sc13g0008230 Simmondsia chinensis HOM05D005135 ORTHO05D005810 7.5e-67 258.1 253 62.5
BraA03t10892Z Brassica rapa HOM05D005135 ORTHO05D005810 9.7e-67 257.7 247 64.4
COL.COLO4_14228 Corchorus olitorius HOM05D005135 ORTHO05D005810 1.3e-66 257.3 255 62.0
Hund04685 Selenicereus undatus HOM05D005135 ORTHO05D005810 1.3e-66 257.3 250 62.0
PSO478G0331 Papaver somniferum HOM05D005135 ORTHO05D005810 2.8e-66 256.1 249 63.9
Sabra15G0147000 Salix brachista HOM05D005135 ORTHO05D005810 2.8e-66 256.1 284 56.0
ECA238G2105 Erigeron canadensis HOM05D005135 ORTHO05D005810 2.4e-65 253.1 242 64.5
Glyma.10G240700 Glycine max HOM05D005135 ORTHO05D005810 2.4e-65 253.1 254 61.0
MD00G1004200 Malus domestica HOM05D005135 ORTHO05D005810 2.4e-65 253.1 248 62.9
MD01G1193100 Malus domestica HOM05D005135 ORTHO05D005810 3.1e-65 252.7 248 62.1
ATR0661G043 Amborella trichopoda HOM05D005135 ORTHO05D005810 5.3e-65 251.9 253 60.5
Ciclev10005677m.g Citrus clementina HOM05D005135 ORTHO05D005810 1.6e-64 250.4 254 61.4
Aa31LG3G8280 Aethionema arabicum HOM05D005135 ORTHO05D005810 2.0e-64 250.0 244 63.5
Lj5g0000742 Lotus japonicus HOM05D005135 ORTHO05D005810 2.0e-64 250.0 245 60.8
AUR62021268 Chenopodium quinoa HOM05D005135 ORTHO05D005810 3.5e-64 249.2 263 58.2
Lj1A988G25 Lonicera japonica HOM05D005135 ORTHO05D005810 3.5e-64 249.2 224 68.3
Cc02_g03590 Coffea canephora HOM05D005135 ORTHO05D005810 5.9e-64 248.4 254 61.4
Glyma.20G154000 Glycine max HOM05D005135 ORTHO05D005810 2.2e-63 246.5 259 59.1
Ah.07g208790 Amaranthus hybridus HOM05D005135 ORTHO05D005810 2.9e-63 246.1 249 59.0
Sed0023089 Sechium edule HOM05D005135 ORTHO05D005810 2.9e-63 246.1 258 58.5
Rhsim09G0195100 Rhododendron simsii HOM05D000559 ORTHO05D005810 3.8e-63 245.7 229 66.8
Lalb_Chr06g0160891 Lupinus albus HOM05D005135 ORTHO05D005810 6.5e-63 245.0 252 59.5
Prupe.2G287200 Prunus persica HOM05D005135 ORTHO05D005810 1.1e-62 244.2 249 60.2
TWI39G0390 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 1.5e-62 243.8 246 61.8
arahy.Tifrunner.gnm1.ann1.UR3NDK Arachis hypogaea HOM05D005135 ORTHO05D005810 4.2e-62 242.3 248 61.3
arahy.Tifrunner.gnm1.ann1.3G6IEL Arachis hypogaea HOM05D005135 ORTHO05D005810 5.5e-62 241.9 252 60.7
Sp6g14090 Schrenkiella parvula HOM05D005135 ORTHO05D005810 2.7e-61 239.6 249 61.0
Lsat_1_v5_gn_2_130120 Lactuca sativa HOM05D005135 ORTHO05D005810 1.0e-60 237.7 252 60.7
Thhalv10014510m.g Eutrema salsugineum HOM05D005135 ORTHO05D005810 2.3e-60 236.5 254 59.4
Dinv28508 Davidia involucrata HOM05D005135 ORTHO05D005810 3.0e-60 236.1 156 81.4
BcaB08g35536 Brassica carinata HOM05D005135 ORTHO05D005810 6.8e-60 235.0 244 61.1
Ca_10813_v3 Cicer arietinum L. HOM05D005135 ORTHO05D005810 8.8e-60 234.6 249 59.4
CARHR264720 Cardamine hirsuta HOM05D005135 ORTHO05D005810 1.2e-59 234.2 245 60.8
BcaB01g04154 Brassica carinata HOM05D005135 ORTHO05D005810 2.6e-59 233.0 256 58.2
Rhsim03G0174700 Rhododendron simsii HOM05D000559 ORTHO05D000596 3.4e-59 232.6 254 57.9
AT5G51840 Arabidopsis thaliana HOM05D005135 ORTHO05D005810 4.4e-59 232.3 260 57.7
Carub.0008s1186 Capsella rubella HOM05D005135 ORTHO05D005810 1.3e-58 230.7 256 57.0
AL8G26130 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 2.8e-58 229.6 254 57.9
PGR042G3048 Punica granatum HOM05D005135 ORTHO05D005810 6.3e-58 228.4 147 84.4
FAN03G1115 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.1e-57 227.6 306 50.7
VMungo0464G2082 Vigna mungo HOM05D000559 ORTHO05D005810 3.1e-57 226.1 252 58.7
Zm00001eb027200 Zea mays HOM05D005135 ORTHO05D005810 5.4e-57 225.3 247 57.1
Gohir.D04G141600 Gossypium hirsutum HOM05D005135 ORTHO05D005810 9.1e-57 224.6 166 74.7
Medtr1g101945 Medicago truncatula HOM05D005135 ORTHO05D005810 2.0e-56 223.4 246 57.7
vmacro06737 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 2.0e-56 223.4 368 44.0
Psat7g169320 Pisum sativum HOM05D005135 ORTHO05D005810 3.5e-56 222.6 250 58.8
HPP92_001726 Vanilla planifolia HOM05D005135 ORTHO05D005810 7.7e-56 221.5 242 57.4
HPP92_001719 Vanilla planifolia HOM05D005135 ORTHO05D005810 1.0e-55 221.1 242 57.4
PGR142G1544 Punica granatum HOM05D005135 ORTHO05D005810 2.5e-54 216.5 255 56.9
Actinidia14214 Actinidia chinensis HOM05D005135 ORTHO05D005810 8.0e-53 211.5 205 64.9
AUR62016060 Chenopodium quinoa HOM05D005135 ORTHO05D005810 1.4e-52 210.7 275 50.9
TPR.G17397 Trifolium pratense HOM05D005135 ORTHO05D005810 1.5e-51 207.2 235 57.9
DCAR_020208 Daucus carota HOM05D005135 ORTHO05D005810 9.8e-51 204.5 220 60.9
AagrBONN_evm.TU.Sc2ySwM_117.1266 Anthoceros agrestis HOM05D005135 ORTHO05D005810 3.9e-47 192.6 272 49.6
Glyma.16G200500 Glycine max HOM05D005135 ORTHO05D005810 1.5e-43 180.6 241 51.9
Mapoly0096s0072 Marchantia polymorpha HOM05D005135 ORTHO05D005810 6.4e-42 175.3 244 47.5
PGSC0003DMG400024247 Solanum tuberosum HOM05D005135 ORTHO05D005810 3.9e-39 166.0 173 59.5
Pp3c13_17710 Physcomitrium patens HOM05D005135 ORTHO05D005810 2.8e-37 159.8 232 46.1
Lalb_Chr21g0304891 Lupinus albus HOM05D005135 ORTHO05D005810 1.1e-36 157.9 221 47.5
Actinidia03096 Actinidia chinensis HOM05D005135 ORTHO05D005810 6.8e-36 155.2 195 56.4
Peaxi162Scf00192g00520 Petunia axillaris HOM05D005135 ORTHO05D005810 6.8e-36 155.2 205 53.2
CDE04G3520 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 1.2e-35 154.5 159 59.1
Lj8C32T8 Lonicera japonica HOM05D005135 ORTHO05D005810 2.9e-34 149.8 111 73.9
Phvul.004G123300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 4.9e-34 149.1 239 46.4
Haze_13791 Corylus avellana HOM05D005135 ORTHO05D005810 6.4e-34 148.7 262 45.0
AL8G30000 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 1.0e-31 141.4 93 78.5
SHI13830 Sapria himalayana HOM05D005135 ORTHO05D005810 6.6e-31 138.7 122 61.5
Lj8A32T30 Lonicera japonica HOM05D005135 ORTHO05D005810 7.3e-30 135.2 176 54.5
Potri.012G132832 Populus trichocarpa HOM05D005135 ORTHO05D005810 6.2e-29 132.1 186 51.1
Cre16.g661800 Chlamydomonas reinhardtii HOM05D005135 ORTHO05D005810 9.6e-22 108.2 126 47.6
Hund01499 Selenicereus undatus HOM05D000873 ORTHO05D005810 1.5e-19 100.9 99 60.6
BcaC04g20628 Brassica carinata HOM05D005135 ORTHO05D005810 9.9e-19 98.2 221 40.3
Os10g0188400 Oryza sativa ssp. japonica HOM05D005135 ORTHO05D005810 2.4e-17 93.6 65 75.4
SHI48584 Sapria himalayana HOM05D005135 ORTHO05D005810 4.6e-16 89.4 147 43.5
Potri.012G132766 Populus trichocarpa HOM05D005135 ORTHO05D005810 1.7e-15 87.4 60 71.7
Hma1.2p1_3202F.1_g333920 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 3.0e-15 86.7 56 82.1
SMO201G0013 Selaginella moellendorffii HOM05D005135 ORTHO05D005810 5.8e-11 72.4 63 60.3
SEGI_16349 Sequoiadendron giganteum HOM05D056048 ORTHO05D005810 1.3e-10 71.2 169 39.6
TAR291G0007 Trochodendron aralioides HOM05D005135 ORTHO05D005810 1.3e-10 71.2 164 41.5
Cpa.g.sc4.198 Carica papaya HOM05D005135 ORTHO05D005810 4.2e-09 66.2 90 47.8
CDE04G1613 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 7.8e-08 62.0 34 82.4
Duzib205G1338 Durio zibethinus HOM05D005135 ORTHO05D005810 2.3e-07 60.5 82 46.3
Duzib205G1376 Durio zibethinus HOM05D005135 ORTHO05D005810 3.9e-07 59.7 82 46.3
PRCOL_00003096 Prasinoderma coloniale HOM05D005135 ORTHO05D005810 1.9e-06 57.4 86 44.2
C09p41330 Brassica napus HOM05D005135 ORTHO05D005810 4.3e-06 56.2 182 35.7
BolC9t57008H Brassica oleracea HOM05D005135 ORTHO05D005810 4.3e-06 56.2 182 35.7


User provided reference genes

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