Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 9.4e-78 293.5 153 100.0
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 9.4e-62 240.4 156 80.8
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.5e-59 233.0 156 78.2
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.6e-59 232.3 156 78.2
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.6e-59 232.3 156 78.2
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 2.6e-59 232.3 151 80.8
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 4.4e-59 231.5 156 78.8
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 2.8e-58 228.8 159 76.1
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 1.4e-57 226.5 158 75.3
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 3.1e-57 225.3 156 75.0
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 4.1e-57 224.9 156 75.6
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 5.3e-57 224.6 156 75.6
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 7.0e-57 224.2 156 74.4
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 2.0e-56 222.6 156 74.4
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 2.0e-56 222.6 156 73.1
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 2.0e-56 222.6 156 73.7
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 2.7e-56 222.2 155 76.1
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 2.7e-56 222.2 151 78.1
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 3.5e-56 221.9 156 73.7
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 3.5e-56 221.9 150 75.3
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 3.5e-56 221.9 154 76.6
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 3.5e-56 221.9 156 75.0
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 3.5e-56 221.9 156 75.6
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 5.9e-56 221.1 156 74.4
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 7.7e-56 220.7 156 71.8
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 7.7e-56 220.7 156 71.8
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.0e-55 220.3 127 85.8
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 1.3e-55 219.9 152 71.1
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 1.7e-55 219.5 139 80.6
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.2e-55 219.2 156 72.4
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 2.2e-55 219.2 154 76.0
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 2.2e-55 219.2 155 74.2
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.2e-55 219.2 157 75.2
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 2.9e-55 218.8 156 73.1
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.8e-55 218.4 157 73.9
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 3.8e-55 218.4 153 75.8
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 3.8e-55 218.4 161 72.0
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 5.0e-55 218.0 127 85.0
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 6.5e-55 217.6 157 72.6
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 6.5e-55 217.6 154 74.7
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 8.5e-55 217.2 132 81.8
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 1.1e-54 216.9 156 72.4
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 1.5e-54 216.5 132 83.3
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 1.5e-54 216.5 157 70.7
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 1.9e-54 216.1 158 73.4
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 2.5e-54 215.7 154 77.9
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 2.5e-54 215.7 153 75.8
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 3.2e-54 215.3 153 75.8
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 4.2e-54 214.9 158 72.2
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 5.5e-54 214.5 153 76.5
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 5.5e-54 214.5 156 73.7
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 5.5e-54 214.5 154 74.0
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 5.5e-54 214.5 154 76.0
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 5.5e-54 214.5 153 75.2
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 7.2e-54 214.2 153 75.2
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 9.4e-54 213.8 155 72.3
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 9.4e-54 213.8 154 72.7
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 9.4e-54 213.8 156 74.4
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 1.2e-53 213.4 156 72.4
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 1.2e-53 213.4 159 71.1
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 2.1e-53 212.6 153 70.6
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 2.7e-53 212.2 156 71.8
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 2.7e-53 212.2 127 85.0
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.6e-53 211.8 156 69.2
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 4.7e-53 211.5 154 73.4
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 4.7e-53 211.5 156 71.8
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 4.7e-53 211.5 153 71.9
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 6.1e-53 211.1 156 71.2
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 8.0e-53 210.7 156 73.1
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.0e-52 210.3 125 82.4
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.0e-52 210.3 157 72.6
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 1.4e-52 209.9 156 69.9
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.8e-52 209.5 127 84.3
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.8e-52 209.5 127 84.3
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 2.3e-52 209.1 126 84.9
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 2.3e-52 209.1 126 84.9
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 2.3e-52 209.1 158 72.8
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 4.0e-52 208.4 127 85.0
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 4.0e-52 208.4 156 71.8
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 5.2e-52 208.0 126 84.9
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 1.5e-51 206.5 156 69.2
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.6e-51 205.7 157 72.6
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 3.4e-51 205.3 127 83.5
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 5.7e-51 204.5 124 85.5
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 9.8e-51 203.8 143 75.5
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 1.3e-50 203.4 159 69.8
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.7e-50 201.8 116 83.6
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 1.4e-49 199.9 114 89.5
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 4.1e-49 198.4 123 79.7
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 2.6e-43 179.1 144 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.6e-40 169.9 135 66.7
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 2.7e-40 169.1 127 69.3
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.7e-39 166.4 157 62.4
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 2.3e-39 166.0 124 67.7
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 2.9e-39 165.6 129 67.4
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 3.8e-39 165.2 128 68.0
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 5.0e-39 164.9 127 66.9
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 6.6e-39 164.5 128 67.2
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 8.6e-39 164.1 143 62.9
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 8.6e-39 164.1 127 66.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 4.3e-38 161.8 131 65.6
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 9.5e-38 160.6 130 65.4
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 2.1e-37 159.5 128 68.8
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 2.8e-37 159.1 99 78.8
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.4e-36 156.8 104 72.1
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 2.2e-34 149.4 100 73.0
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.7e-32 142.5 92 73.9
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.0e-31 140.6 141 55.3
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.7e-15 86.7 64 73.4
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 6.2e-13 78.2 98 45.9
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 8.1e-13 77.8 110 44.5
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 5.1e-07 58.5 107 36.4


User provided reference genes

Program Settings