Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 3.3e-259 897.9 459 100.0
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 2.3e-180 636.0 459 71.5
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 3.6e-173 612.1 462 67.7
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 2.8e-170 602.4 458 67.0
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 5.3e-169 598.2 455 68.4
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 7.2e-158 561.2 455 64.4
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 3.6e-157 558.9 455 64.2
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 5.0e-151 538.5 461 61.8
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 2.9e-143 512.7 453 58.9
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 2.5e-142 509.6 457 58.4
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 1.2e-141 507.3 452 60.0
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 1.8e-140 503.4 452 57.3
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 1.5e-139 500.4 459 56.6
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 1.6e-136 490.3 461 55.1
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 5.9e-136 488.4 460 55.7
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 1.0e-135 487.6 460 55.4
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 3.0e-135 486.1 461 55.1
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 4.0e-132 475.7 476 54.2
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 7.5e-131 471.5 472 53.4
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 1.2e-125 454.1 459 52.5
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 6.2e-125 451.8 402 59.5
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.4e-124 450.7 461 52.1
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 4.0e-124 449.1 458 51.7
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 5.2e-124 448.7 461 52.5
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 2.0e-123 446.8 477 51.4
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 2.6e-123 446.4 399 60.9
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 2.2e-122 443.4 470 50.4
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 3.7e-122 442.6 472 50.0
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 1.1e-121 441.0 407 57.7
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 4.1e-121 439.1 412 58.5
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 1.1e-118 431.0 468 50.2
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 3.3e-118 429.5 472 50.0
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 5.6e-118 428.7 468 49.6
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 3.1e-116 422.9 472 50.8
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 6.8e-116 421.8 459 49.7
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 6.8e-116 421.8 458 50.2
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 5.8e-115 418.7 472 48.9
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 9.9e-115 417.9 471 50.1
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 9.9e-115 417.9 463 49.7
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 1.3e-114 417.5 460 50.7
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 1.1e-113 414.5 476 49.2
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 4.1e-113 412.5 466 47.9
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 1.6e-112 410.6 466 48.7
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 2.1e-112 410.2 476 47.3
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 2.1e-112 410.2 467 48.4
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 2.7e-112 409.8 471 48.8
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 3.5e-112 409.5 482 48.3
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 1.3e-111 407.5 470 47.9
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 1.7e-111 407.1 465 49.0
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 2.3e-111 406.8 460 48.3
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 3.0e-111 406.4 464 48.5
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 3.0e-111 406.4 474 47.9
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 1.1e-110 404.4 462 46.8
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 5.6e-110 402.1 459 47.9
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 7.3e-110 401.7 470 46.8
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 4.7e-109 399.1 465 47.5
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.7e-109 399.1 463 48.4
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 6.2e-109 398.7 450 48.9
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 1.8e-108 397.1 456 48.7
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 1.2e-107 394.4 453 49.7
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.2e-107 394.4 465 48.4
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 1.5e-107 394.0 452 48.5
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 9.9e-107 391.3 452 48.7
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 9.9e-107 391.3 452 48.7
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 9.9e-107 391.3 452 48.7
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 9.9e-107 391.3 453 49.2
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.9e-106 389.8 459 46.8
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 2.9e-106 389.8 462 47.2
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.8e-106 389.4 465 48.0
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 6.4e-106 388.7 447 48.5
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 1.1e-105 387.9 447 48.1
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 2.4e-105 386.7 469 45.6
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 1.7e-103 380.6 447 44.5
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 5.1e-103 379.0 356 55.6
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 1.5e-102 377.5 415 48.7
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 1.6e-101 374.0 397 49.1
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 2.1e-101 373.6 446 47.3
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 2.2e-98 363.6 449 46.3
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.1e-97 361.3 405 49.6
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.2e-96 357.8 398 49.2
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.6e-96 357.5 399 48.4
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 5.1e-95 352.4 449 46.1
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 1.9e-94 350.5 467 42.8
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 1.4e-92 344.4 393 47.6
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 4.2e-89 332.8 366 49.7
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 5.5e-81 305.8 596 34.1
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 3.1e-76 290.0 381 43.8
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 3.1e-76 290.0 327 50.2
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 9.0e-76 288.5 258 55.0
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 4.2e-73 279.6 233 59.2
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 7.4e-70 268.9 459 38.6
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 1.9e-65 254.2 326 46.0
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 6.7e-63 245.7 233 54.1
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 2.2e-58 230.7 530 31.3
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 5.5e-57 226.1 255 48.2
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 8.8e-55 218.8 451 34.6
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 1.1e-54 218.4 296 43.6
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.1e-44 185.3 466 29.2
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 1.6e-43 181.4 145 62.1
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 2.5e-41 174.1 447 32.4
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 8.8e-39 165.6 149 61.1
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 3.1e-36 157.1 522 26.2
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 1.2e-35 155.2 458 30.8
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 5.0e-34 149.8 227 41.9
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 1.5e-30 138.3 131 58.8
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 3.4e-30 137.1 455 28.4
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.2e-27 128.6 117 57.3
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 1.2e-27 128.6 246 35.4
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 6.8e-23 112.8 179 39.7
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 1.3e-18 98.6 107 53.3
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 6.8e-15 86.3 110 49.1
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 4.9e-13 80.1 96 41.7
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 9.2e-12 75.9 116 31.0
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 1.2e-11 75.5 175 31.4
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 2.1e-08 64.7 131 31.3
MCO13G538 Micromonas commoda HOM05D006594 ORTHO05D008383 2.0e-06 58.2 481 21.6


User provided reference genes

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