Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 0.0e+00 1132.9 599 100.0
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 9.4e-158 561.2 651 55.5
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 4.7e-157 558.9 650 55.5
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 4.8e-154 548.9 627 56.0
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 2.1e-149 533.5 672 49.3
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 8.3e-138 495.0 629 52.0
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.1e-134 484.6 645 46.8
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 6.8e-132 475.3 642 47.4
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 4.4e-131 472.6 649 45.9
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 1.3e-130 471.1 648 48.9
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 2.7e-128 463.4 643 45.1
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 3.4e-123 446.4 642 44.1
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 9.2e-121 438.3 659 42.8
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.6e-120 437.6 641 46.6
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 3.9e-119 433.0 653 44.1
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 6.6e-119 432.2 644 43.0
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 8.6e-119 431.8 648 44.1
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 2.3e-116 423.7 643 43.5
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.8e-116 422.2 616 42.7
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 8.9e-116 421.8 632 42.9
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 2.6e-115 420.2 649 43.6
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 4.4e-115 419.5 647 42.7
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 3.7e-114 416.4 648 43.5
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 9.2e-113 411.8 650 43.7
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.2e-112 411.4 637 42.2
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.6e-112 411.0 645 43.3
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 2.1e-112 410.6 646 43.3
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 3.3e-110 403.3 656 42.1
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 3.3e-110 403.3 644 42.7
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 5.6e-110 402.5 636 42.6
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 4.0e-108 396.4 481 47.8
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.0e-108 396.4 664 42.0
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 5.2e-108 396.0 465 48.8
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 8.9e-108 395.2 659 43.7
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 1.2e-107 394.8 638 41.2
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 1.5e-107 394.4 650 40.5
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.1e-105 388.3 658 41.8
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.4e-105 387.9 658 40.7
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 2.4e-105 387.1 641 41.8
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 3.2e-105 386.7 646 41.6
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 4.2e-105 386.3 645 45.0
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.4e-105 386.0 631 41.4
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 1.2e-104 384.8 620 41.8
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.6e-104 384.4 654 40.5
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 2.7e-104 383.6 644 40.2
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 1.0e-103 381.7 591 43.1
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.3e-103 381.3 624 41.8
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 2.3e-103 380.6 663 38.6
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.3e-103 380.6 636 40.6
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 3.0e-103 380.2 644 42.1
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 8.7e-103 378.6 645 40.2
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.5e-102 377.9 659 40.1
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 4.3e-102 376.3 635 40.9
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.3e-102 376.3 622 41.3
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 1.3e-101 374.8 635 40.2
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.8e-101 373.6 637 41.1
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 4.8e-101 372.9 643 41.7
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.8e-100 370.9 622 40.5
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 6.9e-100 369.0 717 39.6
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.5e-99 367.9 620 40.6
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.7e-98 364.4 643 41.5
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 2.2e-98 364.0 647 40.0
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 8.4e-98 362.1 630 38.6
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 1.9e-97 360.9 630 38.4
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.4e-97 360.5 638 39.3
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.6e-96 357.8 645 39.2
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.5e-96 356.7 635 39.1
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 6.0e-96 355.9 651 39.6
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 1.0e-95 355.1 663 37.7
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.3e-95 354.8 637 39.6
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 1.7e-95 354.4 651 40.7
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.4e-94 349.0 637 39.7
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 7.4e-94 349.0 386 50.8
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 1.3e-93 348.2 631 39.5
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.1e-93 347.4 626 39.8
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 2.8e-93 347.1 660 37.6
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 6.2e-93 345.9 452 48.5
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 6.2e-93 345.9 661 38.3
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 1.4e-92 344.7 652 36.8
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 2.4e-92 344.0 461 46.4
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.5e-91 341.3 651 37.5
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 9.9e-91 338.6 654 36.7
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.9e-90 337.0 637 38.6
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 2.9e-90 337.0 642 38.9
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 6.4e-90 335.9 626 36.9
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 1.1e-89 335.1 633 39.0
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 1.9e-89 334.3 582 39.9
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 3.2e-89 333.6 611 38.5
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 3.2e-89 333.6 587 39.4
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 9.3e-89 332.0 597 40.4
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.6e-88 331.3 457 47.9
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.6e-88 329.7 646 38.1
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.3e-87 328.2 650 39.1
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 1.3e-87 328.2 765 35.8
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.8e-87 327.8 728 35.0
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 6.7e-87 325.9 658 38.0
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 4.3e-86 323.2 613 41.3
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.3e-86 323.2 621 36.6
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 3.7e-85 320.1 584 39.6
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 8.1e-85 318.9 610 41.6
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 2.4e-84 317.4 633 39.2
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 9.0e-84 315.5 637 35.2
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 2.0e-83 314.3 245 63.7
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.3e-82 311.6 592 41.6
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.2e-82 310.8 556 40.3
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 2.9e-82 310.5 637 35.0
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 4.9e-82 309.7 598 39.8
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 3.2e-81 307.0 632 35.8
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 7.1e-81 305.8 449 42.8
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 6.0e-80 302.8 583 40.5
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 2.3e-79 300.8 331 50.5
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 6.7e-79 299.3 591 39.3
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 1.5e-78 298.1 611 36.7
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 2.5e-78 297.4 650 35.8
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 5.7e-78 296.2 652 34.8
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 7.4e-78 295.8 570 36.7
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 1.6e-77 294.7 571 37.1
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.8e-77 293.9 521 40.3
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 8.2e-77 292.4 248 57.7
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 1.8e-76 291.2 254 57.1
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 3.1e-76 290.4 608 39.1
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 9.0e-76 288.9 602 35.2
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 1.2e-75 288.5 578 40.8
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 1.2e-75 288.5 571 37.1
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 2.0e-75 287.7 588 39.6
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 2.0e-75 287.7 701 34.5
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 2.6e-75 287.3 588 37.2
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 2.6e-75 287.3 571 37.5
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 3.4e-75 287.0 676 36.5
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 4.5e-75 286.6 595 39.2
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.0e-74 285.4 266 56.0
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.0e-74 285.4 334 53.3
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 2.2e-74 284.3 603 39.1
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 6.5e-74 282.7 517 38.9
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 1.9e-73 281.2 603 37.3
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 4.2e-73 280.0 537 37.2
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.7e-72 277.3 342 46.8
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 6.7e-71 272.7 637 34.9
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 9.7e-70 268.9 266 56.0
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 2.4e-68 264.2 669 35.0
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.0e-67 261.2 629 36.1
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.6e-67 260.8 556 37.2
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.5e-65 254.2 205 64.4
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 3.2e-65 253.8 547 35.3
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 3.6e-64 250.4 553 34.9
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 6.1e-64 249.6 272 49.3
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 9.1e-60 235.7 266 50.0
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.6e-56 224.9 205 54.6
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 4.7e-56 223.4 338 42.3
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 2.4e-52 211.1 205 50.2
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.6e-51 208.4 139 74.8
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.0e-50 205.7 619 32.0
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 7.5e-46 189.5 135 74.1
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.4e-38 163.7 639 29.1
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 2.2e-34 151.4 208 44.2
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 6.8e-31 139.8 114 60.5
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.4e-30 137.5 164 51.2
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 2.0e-27 128.3 111 57.7
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 3.5e-27 127.5 200 40.0
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.8e-23 115.2 84 72.6
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 4.1e-20 104.0 211 34.6
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.6e-14 84.7 346 27.5
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 5.8e-14 83.6 422 28.4
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 2.9e-13 81.3 66 63.6
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.2e-12 76.3 62 64.5
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.0e-10 72.8 67 49.3
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 2.3e-10 71.6 372 29.3
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 4.3e-09 67.4 78 47.4
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.6e-09 67.0 70 54.3
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.6e-09 67.0 97 40.2
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.1e-07 62.8 58 56.9
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 7.5e-06 56.6 158 30.4


User provided reference genes

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