Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01091 Erythranthe guttata HOM05D004420 ORTHO05D005048 6.8e-166 587.4 333 100.0
Oeu045734.2 Olea europaea HOM05D004420 ORTHO05D005048 4.4e-88 328.9 380 55.3
SalBow2G0301 Salvia bowleyana HOM05D004420 ORTHO05D005048 3.5e-85 319.3 367 61.0
SalBow2G0742 Salvia bowleyana HOM05D004420 ORTHO05D005048 3.5e-85 319.3 367 61.0
Oeu043391.2 Olea europaea HOM05D004420 ORTHO05D005048 1.6e-82 310.5 383 52.5
Nitab4.5_0004608g0040 Nicotiana tabacum HOM05D004420 ORTHO05D005048 1.8e-78 297.0 378 52.4
Cc07_g11920 Coffea canephora HOM05D004420 ORTHO05D005048 1.2e-77 294.3 382 52.1
Nitab4.5_0001467g0050 Nicotiana tabacum HOM05D004420 ORTHO05D005048 1.2e-74 284.3 379 50.4
CSS0016949 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 1.4e-73 280.8 367 49.6
CSS0044881 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 1.4e-73 280.8 367 49.6
SGA_v2.0_scaffold10G05298 Striga asiatica HOM05D004420 ORTHO05D005048 5.2e-73 278.9 331 57.7
Dinv40192 Davidia involucrata HOM05D004420 ORTHO05D005048 4.4e-72 275.8 367 49.3
CAN.G1238.15 Capsicum annuum HOM05D004420 ORTHO05D005048 2.2e-71 273.5 376 52.1
Dinv40193 Davidia involucrata HOM05D004420 ORTHO05D005048 2.4e-70 270.0 353 49.9
Rhsim10G0195100 Rhododendron simsii HOM05D004420 ORTHO05D005048 2.4e-70 270.0 351 50.7
Peaxi162Scf00121g00249 Petunia axillaris HOM05D004420 ORTHO05D005048 3.2e-70 269.6 378 51.6
CSS0013805 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 2.7e-69 266.5 369 51.2
PGSC0003DMG400001515 Solanum tuberosum HOM05D004420 ORTHO05D005048 5.0e-68 262.3 379 50.4
Sopen02g027250 Solanum pennellii HOM05D004420 ORTHO05D005048 4.3e-67 259.2 380 50.3
Actinidia17355 Actinidia chinensis HOM05D004420 ORTHO05D005048 6.1e-66 255.4 370 44.9
Cfa007085 Carpinus fangiana HOM05D004420 ORTHO05D005048 1.8e-65 253.8 395 46.3
Lj2P500T27 Lonicera japonica HOM05D004420 ORTHO05D005048 1.5e-64 250.8 350 47.7
arahy.Tifrunner.gnm1.ann1.7Y7MXI Arachis hypogaea HOM05D004420 ORTHO05D005048 9.8e-64 248.1 376 47.3
arahy.Tifrunner.gnm1.ann1.PTZ9GF Arachis hypogaea HOM05D004420 ORTHO05D005048 9.8e-64 248.1 376 47.3
CiPaw.08G182000 Carya illinoinensis HOM05D004420 ORTHO05D005048 1.3e-63 247.7 374 48.1
vmacro20627 Vaccinium macrocarpon HOM05D004420 ORTHO05D005048 1.7e-63 247.3 340 47.1
Hma1.2p1_0300F.1_g117950 Hydrangea macrophylla HOM05D004420 ORTHO05D005048 6.4e-63 245.4 370 48.9
Prupe.7G183600 Prunus persica HOM05D004420 ORTHO05D005048 8.3e-63 245.0 382 43.2
VMungo0251G1478 Vigna mungo HOM05D004420 ORTHO05D005048 4.6e-61 239.2 373 46.9
Phvul.003G270300 Phaseolus vulgaris HOM05D004420 ORTHO05D005048 1.3e-60 237.7 373 44.5
Actinidia22893 Actinidia chinensis HOM05D004420 ORTHO05D005048 1.7e-60 237.3 365 44.9
RcHm_v2.0_Chr2g0097081 Rosa chinensis HOM05D004420 ORTHO05D005048 1.7e-60 237.3 382 45.0
Thecc.01G004900 Theobroma cacao HOM05D004420 ORTHO05D005048 6.6e-60 235.3 386 44.6
FvH4_1g10260 Fragaria vesca HOM05D004420 ORTHO05D005048 8.6e-60 235.0 380 44.2
Actinidia35683 Actinidia chinensis HOM05D004420 ORTHO05D005048 1.1e-59 234.6 368 48.4
FAN26G2737 Fragaria x ananassa HOM05D004420 ORTHO05D005048 1.1e-59 234.6 380 44.2
Hma1.2p1_0085F.1_g044630 Hydrangea macrophylla HOM05D004420 ORTHO05D005048 1.1e-59 234.6 363 46.8
FAN19G0089 Fragaria x ananassa HOM05D004420 ORTHO05D005048 2.5e-59 233.4 380 43.9
Lalb_Chr05g0214821 Lupinus albus HOM05D004420 ORTHO05D005048 2.5e-59 233.4 378 45.8
Migut.F00308 Erythranthe guttata HOM05D004420 ORTHO05D005048 3.3e-59 233.0 346 51.7
Glyma.01G158300 Glycine max HOM05D004420 ORTHO05D005048 5.6e-59 232.3 372 44.9
Ca_02853_v3 Cicer arietinum L. HOM05D004420 ORTHO05D005048 9.5e-59 231.5 370 45.4
FAN23G0043 Fragaria x ananassa HOM05D004420 ORTHO05D005048 9.5e-59 231.5 380 43.4
Ciclev10025852m.g Citrus clementina HOM05D004420 ORTHO05D005048 1.6e-58 230.7 381 40.7
Gohir.D03G001500 Gossypium hirsutum HOM05D004420 ORTHO05D005048 1.4e-57 227.6 387 45.7
CsaV3_3G000180 Cucumis sativus L. HOM05D004420 ORTHO05D005048 1.8e-57 227.3 377 44.8
Actinidia28747 Actinidia chinensis HOM05D004420 ORTHO05D005048 6.8e-57 225.3 366 48.6
Gohir.A02G178300 Gossypium hirsutum HOM05D004420 ORTHO05D005048 1.2e-56 224.6 391 45.3
Manes.01G155700 Manihot esculenta HOM05D004420 ORTHO05D005048 1.2e-56 224.6 400 39.5
Duzib147G0341 Durio zibethinus HOM05D004420 ORTHO05D005048 1.5e-56 224.2 385 42.3
unitig_46.g18801 Utricularia gibba HOM05D004420 ORTHO05D005048 1.5e-56 224.2 358 42.7
Cpa.g.sc6.366 Carica papaya HOM05D004420 ORTHO05D005048 2.6e-56 223.4 373 42.9
MELO3C013712.2 Cucumis melo HOM05D004420 ORTHO05D005048 2.6e-56 223.4 377 44.6
QL06p053029 Quercus lobata HOM05D004420 ORTHO05D005048 2.6e-56 223.4 396 44.4
Gorai.003G001900 Gossypium raimondii HOM05D004420 ORTHO05D005048 5.8e-56 222.2 389 45.2
Psat4g103680 Pisum sativum HOM05D004420 ORTHO05D005048 5.8e-56 222.2 380 42.6
Glyma.11G086400 Glycine max HOM05D004420 ORTHO05D005048 7.5e-56 221.9 370 44.9
MD15G1230400 Malus domestica HOM05D004420 ORTHO05D005048 1.3e-55 221.1 385 42.1
Potri.007G063000 Populus trichocarpa HOM05D004420 ORTHO05D005048 1.3e-55 221.1 392 41.1
MD02G1114600 Malus domestica HOM05D004420 ORTHO05D005048 2.9e-55 219.9 381 43.8
DCAR_014284 Daucus carota HOM05D004420 ORTHO05D005048 3.7e-55 219.5 363 41.0
DCAR_014308 Daucus carota HOM05D004420 ORTHO05D005048 3.7e-55 219.5 363 41.0
Eucgr.I02220 Eucalyptus grandis HOM05D004420 ORTHO05D005048 1.4e-54 217.6 360 44.7
Potri.005G102000 Populus trichocarpa HOM05D004420 ORTHO05D005048 1.4e-54 217.6 390 41.3
Sabra05G0084400 Salix brachista HOM05D004420 ORTHO05D005048 1.4e-54 217.6 390 41.8
Medtr8g073305 Medicago truncatula HOM05D004420 ORTHO05D005048 4.1e-54 216.1 378 44.2
CANSAT25G3726 Cannabis sativa HOM05D004420 ORTHO05D005048 7.1e-54 215.3 386 45.6
Phvul.002G117000 Phaseolus vulgaris HOM05D004420 ORTHO05D005048 1.2e-53 214.5 377 40.8
TPR.G13730 Trifolium pratense HOM05D004420 ORTHO05D005048 1.2e-53 214.5 379 43.5
ClCG10G000160 Citrullus lanatus HOM05D004420 ORTHO05D005048 1.6e-53 214.2 391 42.5
Lj4P237T30 Lonicera japonica HOM05D004420 ORTHO05D005048 1.6e-53 214.2 375 46.1
TWI09G0210 Tripterygium wilfordii HOM05D004420 ORTHO05D005048 7.8e-53 211.8 375 39.2
Manes.02G114400 Manihot esculenta HOM05D004420 ORTHO05D005048 1.0e-52 211.5 398 41.2
Atru.chr3.127 Acer truncatum HOM05D004420 ORTHO05D005048 1.7e-52 210.7 379 43.8
Duzib264G0151 Durio zibethinus HOM05D004420 ORTHO05D005048 1.6e-50 204.1 383 41.5
Lj2g0010108 Lotus japonicus HOM05D004420 ORTHO05D005048 2.1e-50 203.8 370 42.4
Lalb_Chr09g0324761 Lupinus albus HOM05D004420 ORTHO05D005048 2.8e-50 203.4 366 40.7
CiPaw.07G002200 Carya illinoinensis HOM05D004420 ORTHO05D005048 3.6e-50 203.0 330 47.0
HanXRQChr16g0531901 Helianthus annuus HOM05D004420 ORTHO05D005048 6.2e-50 202.2 341 47.8
HanXRQChr16g0531911 Helianthus annuus HOM05D004420 ORTHO05D005048 6.2e-50 202.2 341 47.5
ECA246G3765 Erigeron canadensis HOM05D004420 ORTHO05D005048 1.1e-49 201.4 347 46.7
VMungo1215G0928 Vigna mungo HOM05D004420 ORTHO05D005048 1.4e-49 201.1 377 39.8
GSVIVG01022291001 Vitis vinifera HOM05D004420 ORTHO05D005048 1.8e-49 200.7 335 46.3
Lalb_Chr09g0334351 Lupinus albus HOM05D004420 ORTHO05D005048 3.1e-49 199.9 373 44.0
Sed0027819 Sechium edule HOM05D004420 ORTHO05D005048 8.9e-49 198.4 374 42.0
Glyma.09G197900 Glycine max HOM05D004420 ORTHO05D005048 1.5e-48 197.6 352 45.5
COL.COLO4_22555 Corchorus olitorius HOM05D004420 ORTHO05D005048 5.8e-48 195.7 354 41.8
TWI53G1718 Tripterygium wilfordii HOM05D004420 ORTHO05D005048 7.6e-48 195.3 351 40.5
EL10Ac6g15050 Beta vulgaris HOM05D004420 ORTHO05D005048 1.3e-47 194.5 373 43.2
PGR119G1834 Punica granatum HOM05D004420 ORTHO05D005048 3.2e-46 189.9 361 41.6
SGA_v2.0_scaffold60G21098 Striga asiatica HOM05D004420 ORTHO05D005048 4.1e-46 189.5 292 44.2
Glyma.16G111400 Glycine max HOM05D004420 ORTHO05D005048 2.1e-45 187.2 355 43.4
AUR62002052 Chenopodium quinoa HOM05D004420 ORTHO05D005048 7.8e-45 185.3 354 38.1
Ah.03g142860 Amaranthus hybridus HOM05D004420 ORTHO05D005048 1.0e-44 184.9 385 39.7
Sc07g0001390 Simmondsia chinensis HOM05D004420 ORTHO05D005048 3.0e-44 183.3 363 43.8
Ah.02g123000 Amaranthus hybridus HOM05D000464 ORTHO05D005048 3.1e-41 173.3 391 39.6
AL3G50510 Arabidopsis lyrata HOM05D004420 ORTHO05D005048 8.9e-41 171.8 348 37.9
THA.LOC104819714 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 8.9e-41 171.8 391 35.3
Sopen03g005950 Solanum pennellii HOM05D004420 ORTHO05D005048 2.6e-40 170.2 308 41.6
Solyc03g032100.2 Solanum lycopersicum HOM05D004420 ORTHO05D005048 4.4e-40 169.5 308 41.2
Gohir.A07G173800 Gossypium hirsutum HOM05D004420 ORTHO05D005048 9.9e-40 168.3 318 44.0
Gorai.001G199300 Gossypium raimondii HOM05D004420 ORTHO05D005048 9.9e-40 168.3 318 44.0
unitig_52.g17736 Utricularia gibba HOM05D004420 ORTHO05D005048 1.3e-39 167.9 187 65.8
Lalb_Chr16g0380091 Lupinus albus HOM05D004420 ORTHO05D005048 1.7e-39 167.5 377 38.5
THA.LOC104807425 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 2.9e-39 166.8 364 38.5
Gohir.D07G178200 Gossypium hirsutum HOM05D004420 ORTHO05D005048 3.8e-39 166.4 318 43.7
CAN.G354.13 Capsicum annuum HOM05D004420 ORTHO05D005048 1.9e-38 164.1 295 43.4
TAR376G0940 Trochodendron aralioides HOM05D004420 ORTHO05D005048 4.2e-38 162.9 370 40.5
PSO761G0558 Papaver somniferum HOM05D004420 ORTHO05D005048 5.4e-38 162.5 321 43.9
AUR62003743 Chenopodium quinoa HOM05D004420 ORTHO05D005048 7.1e-38 162.2 265 41.5
Aa31LG8G14840 Aethionema arabicum HOM05D004420 ORTHO05D005048 9.3e-38 161.8 368 34.5
Peaxi162Scf00580g00013 Petunia axillaris HOM05D004420 ORTHO05D005048 1.2e-37 161.4 189 58.7
PSO210G4741 Papaver somniferum HOM05D004420 ORTHO05D005048 1.0e-36 158.3 321 43.3
Lj4g0016332 Lotus japonicus HOM05D004420 ORTHO05D005048 8.7e-36 155.2 373 36.2
PGSC0003DMG400018682 Solanum tuberosum HOM05D004420 ORTHO05D005048 1.5e-35 154.5 310 42.9
Carub.0003s3163 Capsella rubella HOM05D004420 ORTHO05D005048 1.9e-35 154.1 350 35.4
Aqoxy6G01610 Aquilegia oxysepala HOM05D004420 ORTHO05D005048 1.6e-34 151.0 360 38.6
Carub.0007s0482 Capsella rubella HOM05D004420 ORTHO05D005048 1.1e-33 148.3 349 33.5
Sabra07G0052400 Salix brachista HOM05D004420 ORTHO05D005048 4.0e-33 146.4 314 42.0
TAR625G1485 Trochodendron aralioides HOM05D004420 ORTHO05D005048 3.4e-32 143.3 362 37.3
AT4G35510 Arabidopsis thaliana HOM05D004420 ORTHO05D005048 4.9e-31 139.4 352 34.1
Sp3g30900 Schrenkiella parvula HOM05D004420 ORTHO05D005048 6.4e-31 139.0 295 37.3
TAR381G0338 Trochodendron aralioides HOM05D004420 ORTHO05D005048 8.4e-31 138.7 324 39.2
Nn6g31686 Nelumbo nucifera HOM05D004420 ORTHO05D005048 2.4e-30 137.1 301 41.9
CARHR243840 Cardamine hirsuta HOM05D004420 ORTHO05D005048 2.7e-29 133.7 354 35.6
Solyc02g082570.3 Solanum lycopersicum HOM05D004420 ORTHO05D005048 3.9e-28 129.8 150 61.3
Eucgr.J02539 Eucalyptus grandis HOM05D004420 ORTHO05D005048 5.1e-28 129.4 180 49.4
AL7G15660 Arabidopsis lyrata HOM05D004420 ORTHO05D005048 1.9e-27 127.5 358 33.5
Lsat_1_v5_gn_8_112420 Lactuca sativa HOM05D004420 ORTHO05D005048 2.5e-27 127.1 328 35.4
BcaB03g16523 Brassica carinata HOM05D004420 ORTHO05D005048 1.3e-26 124.8 294 37.4
Thhalv10025668m.g Eutrema salsugineum HOM05D004420 ORTHO05D005048 1.6e-26 124.4 359 32.9
BcaC06g36286 Brassica carinata HOM05D004420 ORTHO05D005048 2.8e-26 123.6 272 39.7
C07p05740 Brassica napus HOM05D004420 ORTHO05D005048 8.1e-26 122.1 272 39.3
BraA06t26325Z Brassica rapa HOM05D004420 ORTHO05D005048 1.1e-25 121.7 270 35.6
A06p33900 Brassica napus HOM05D004420 ORTHO05D005048 4.0e-25 119.8 270 35.2
BcaB08g34743 Brassica carinata HOM05D004420 ORTHO05D005048 5.3e-25 119.4 281 36.3
Lsat_1_v5_gn_3_67941 Lactuca sativa HOM05D004420 ORTHO05D005048 5.3e-25 119.4 361 37.4
CiPaw.13G121300 Carya illinoinensis HOM05D004420 ORTHO05D005048 2.6e-24 117.1 146 63.0
Thhalv10022789m.g Eutrema salsugineum HOM05D004420 ORTHO05D005048 3.4e-24 116.7 299 33.8
MBI08_g12255_MAGBIO Magnolia biondii HOM05D004420 ORTHO05D005048 1.6e-21 107.8 338 34.9
CDE05G3647 Ceratophyllum demersum HOM05D004420 ORTHO05D005048 7.9e-21 105.5 359 31.5
BolC3t18106H Brassica oleracea HOM05D004420 ORTHO05D005048 2.5e-19 100.5 287 33.1
AT2G17540 Arabidopsis thaliana HOM05D004420 ORTHO05D005048 7.4e-19 99.0 345 28.1
BcaC01g02911 Brassica carinata HOM05D004420 ORTHO05D005048 1.6e-18 97.8 277 32.5
C03p58480 Brassica napus HOM05D004420 ORTHO05D005048 1.6e-18 97.8 277 32.5
Sp7g33290 Schrenkiella parvula HOM05D004420 ORTHO05D005048 6.2e-18 95.9 344 31.4
BraA07t28141Z Brassica rapa HOM05D004420 ORTHO05D005048 5.8e-16 89.4 270 33.7
BcaNung03633 Brassica carinata HOM05D004420 ORTHO05D005048 3.8e-15 86.7 271 30.6
BolC7t40973H Brassica oleracea HOM05D004420 ORTHO05D005048 8.4e-15 85.5 272 33.5
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 1.6e-13 81.3 287 30.0
CARHR107720 Cardamine hirsuta HOM05D004420 ORTHO05D005048 3.7e-10 70.1 343 28.6
BraA01t00293Z Brassica rapa HOM05D004420 ORTHO05D005048 2.4e-09 67.4 271 28.4
BolC1t00331H Brassica oleracea HOM05D004420 ORTHO05D005048 1.2e-08 65.1 270 29.6
A01p03090 Brassica napus HOM05D004420 ORTHO05D005048 7.6e-08 62.4 272 28.3
THA.LOC104804296 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 7.6e-08 62.4 118 33.9
BraA03t15434Z Brassica rapa HOM05D004420 ORTHO05D005048 6.5e-07 59.3 337 27.3
BolC7t46546H Brassica oleracea HOM05D004420 ORTHO05D005048 1.1e-06 58.5 286 28.3
C07p61200 Brassica napus HOM05D004420 ORTHO05D005048 5.5e-06 56.2 281 28.1


User provided reference genes

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