Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 6.5e-123 444.1 231 100.0
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 5.7e-95 351.3 232 80.2
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 3.1e-93 345.5 231 78.8
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 1.2e-92 343.6 225 82.2
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 2.3e-88 329.3 224 79.0
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 8.3e-86 320.9 231 70.1
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 5.9e-84 314.7 232 72.4
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 7.7e-84 314.3 232 72.4
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 1.3e-83 313.5 232 72.0
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.7e-83 313.2 231 72.7
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 3.8e-83 312.0 234 73.1
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 1.5e-82 310.1 233 70.8
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 4.2e-82 308.5 230 71.3
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 5.5e-82 308.1 231 69.3
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 9.5e-82 307.4 232 70.7
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 2.1e-81 306.2 227 70.9
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 2.1e-81 306.2 227 70.5
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 1.4e-80 303.5 235 69.4
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 3.0e-80 302.4 224 73.2
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 3.0e-80 302.4 232 70.7
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 4.0e-80 302.0 231 70.1
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.2e-79 300.4 206 73.8
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.2e-79 300.4 189 78.3
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 1.5e-79 300.1 232 69.8
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.0e-79 299.7 227 71.8
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.6e-79 299.3 189 77.8
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 2.6e-79 299.3 229 70.7
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 2.6e-79 299.3 229 70.3
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 4.4e-79 298.5 234 70.9
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 9.8e-79 297.4 211 73.9
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.8e-78 295.8 226 70.8
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 2.8e-78 295.8 227 70.9
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 3.7e-78 295.4 206 75.2
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 1.4e-77 293.5 230 69.1
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 3.1e-77 292.4 201 69.7
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.1e-77 292.4 199 74.9
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.1e-77 292.0 231 66.7
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.1e-77 292.0 199 74.9
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.0e-77 291.2 199 74.4
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 9.2e-77 290.8 231 65.8
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 1.6e-76 290.0 231 66.2
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 2.0e-76 289.7 231 66.2
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 2.7e-76 289.3 226 71.2
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.7e-76 289.3 232 68.1
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 2.7e-76 289.3 232 68.1
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.5e-76 288.9 199 73.9
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 4.5e-76 288.5 180 82.2
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 7.8e-76 287.7 190 78.4
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 7.8e-76 287.7 232 69.4
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 1.3e-75 287.0 223 67.3
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 1.7e-75 286.6 236 67.8
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 2.3e-75 286.2 232 68.1
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.9e-75 285.8 231 65.8
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 1.9e-74 283.1 234 65.0
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 5.6e-74 281.6 206 72.8
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 5.6e-74 281.6 223 65.9
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 5.6e-74 281.6 207 71.0
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 7.3e-74 281.2 215 67.4
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 9.5e-74 280.8 246 61.4
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 6.1e-73 278.1 223 65.0
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 3.0e-72 275.8 231 65.4
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 1.2e-71 273.9 178 78.1
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 2.0e-71 273.1 201 75.6
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.3e-70 270.4 201 75.6
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 8.3e-70 267.7 226 61.5
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 1.1e-69 267.3 172 79.7
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.4e-69 266.9 199 70.9
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 2.4e-69 266.2 201 69.7
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 3.2e-69 265.8 231 63.6
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 4.1e-69 265.4 216 64.4
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 5.4e-69 265.0 225 62.2
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 7.0e-69 264.6 227 63.0
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 2.0e-68 263.1 198 73.2
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 2.7e-68 262.7 185 69.7
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 2.7e-68 262.7 232 60.8
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 3.5e-68 262.3 185 69.2
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 4.6e-68 261.9 178 74.2
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 4.6e-68 261.9 232 60.8
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 7.8e-68 261.2 234 60.3
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 1.7e-67 260.0 214 64.0
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 3.0e-67 259.2 201 67.2
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.9e-67 258.8 178 73.0
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 3.9e-67 258.8 212 66.5
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 6.6e-67 258.1 231 60.6
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.9e-66 256.5 185 69.7
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 1.9e-66 256.5 231 59.3
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.5e-66 256.1 214 64.5
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 3.3e-66 255.8 231 59.3
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 3.3e-66 255.8 231 59.7
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 3.3e-66 255.8 231 59.7
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 5.6e-66 255.0 231 59.7
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 5.6e-66 255.0 231 59.7
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 5.6e-66 255.0 231 59.7
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.6e-65 253.4 171 71.3
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 3.6e-65 252.3 174 72.4
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 6.8e-64 248.1 181 66.9
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 8.9e-64 247.7 194 68.6
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.0e-63 246.5 175 68.6
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 4.4e-63 245.4 165 77.6
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 7.5e-63 244.6 217 62.7
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 7.5e-63 244.6 217 62.7
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 2.9e-62 242.7 171 71.9
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.4e-61 239.6 232 60.8
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 2.3e-59 233.0 155 78.7
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 1.9e-58 229.9 231 59.3
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 7.3e-58 228.0 164 70.7
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 7.3e-58 228.0 164 70.7
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.2e-57 227.3 164 70.1
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 3.6e-57 225.7 225 56.4
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 1.1e-56 224.2 171 66.1
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 8.9e-56 221.1 156 70.5
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 7.5e-55 218.0 155 69.0
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 1.3e-54 217.2 161 67.1
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 4.9e-54 215.3 155 67.1
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 3.2e-53 212.6 155 70.3
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 7.1e-53 211.5 189 58.2
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 7.1e-53 211.5 155 67.7
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 1.2e-52 210.7 183 58.5
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.0e-51 207.6 125 86.4
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 6.6e-51 204.9 155 68.4
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 8.6e-51 204.5 156 67.9
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 1.1e-50 204.1 156 64.1
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 3.3e-50 202.6 194 57.2
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 3.3e-50 202.6 137 75.9
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 4.3e-50 202.2 145 68.3
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 3.6e-49 199.1 146 69.2
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 1.8e-48 196.8 194 54.6
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 4.0e-48 195.7 151 66.2
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 8.9e-48 194.5 171 59.1
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.4e-47 192.6 144 73.6
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 5.8e-47 191.8 189 53.4
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 1.3e-46 190.7 206 53.4
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 1.3e-46 190.7 206 53.4
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 9.2e-45 184.5 215 49.3
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 7.8e-44 181.4 118 79.7
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 7.3e-42 174.9 183 50.3
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 6.2e-41 171.8 236 45.8
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 3.1e-40 169.5 137 62.8
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 5.3e-40 168.7 190 46.8
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 5.3e-40 168.7 226 46.5
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 5.8e-39 165.2 236 44.9
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.8e-39 165.2 106 80.2
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.7e-38 163.7 106 79.2
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 8.7e-35 151.4 108 72.2
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 3.3e-34 149.4 157 49.7
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 7.4e-26 121.7 87 69.0
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 4.2e-21 105.9 204 34.8
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 2.7e-20 103.2 156 41.7
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 6.9e-16 88.6 95 53.7
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.4e-15 86.3 97 51.5
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.7e-14 84.0 101 49.5


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