Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 0.0e+00 1563.9 840 100.0
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 2.1e-272 942.6 872 66.2
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 2.2e-261 906.0 872 63.0
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 6.6e-258 894.4 867 61.7
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 2.1e-243 846.3 863 59.0
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 1.0e-242 844.0 865 59.9
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 5.1e-242 841.6 907 58.1
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 1.1e-239 833.9 863 61.0
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 4.4e-238 828.6 859 60.4
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 3.8e-237 825.5 863 57.6
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 8.4e-237 824.3 866 58.7
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 1.2e-235 820.5 788 61.4
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 2.1e-235 819.7 877 57.8
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 1.3e-229 800.4 877 56.4
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 7.9e-227 791.2 912 54.4
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 5.3e-223 778.5 916 55.5
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 8.4e-221 771.2 809 57.2
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.6e-219 766.9 870 54.0
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 1.3e-216 757.3 878 54.3
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 3.7e-216 755.7 883 54.5
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 1.4e-215 753.8 850 55.9
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 5.8e-214 748.4 843 56.7
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 1.0e-213 747.7 825 56.6
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 1.3e-213 747.3 850 55.6
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 5.1e-210 735.3 853 56.2
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 4.8e-208 728.8 866 54.3
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 2.2e-205 719.9 854 52.6
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 2.9e-205 719.5 885 53.0
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 1.2e-203 714.1 880 54.0
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 3.9e-202 709.1 831 53.8
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.1e-201 707.6 895 52.5
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 1.6e-200 703.7 878 52.6
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.8e-200 703.0 872 51.6
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 2.4e-199 699.9 871 52.7
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 7.7e-198 694.9 890 50.4
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 2.9e-197 693.0 818 52.9
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 3.8e-197 692.6 764 57.2
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 3.2e-196 689.5 877 50.9
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 4.2e-196 689.1 879 52.3
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 1.2e-195 687.6 871 51.3
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 6.7e-194 681.8 882 51.5
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 4.3e-193 679.1 786 55.2
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 1.8e-191 673.7 821 52.3
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 2.0e-190 670.2 879 50.9
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 2.2e-189 666.8 832 53.7
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 3.8e-189 666.0 877 49.9
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 3.8e-189 666.0 877 51.2
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 3.2e-188 662.9 753 55.4
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 2.1e-187 660.2 885 51.0
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 2.7e-187 659.8 874 50.1
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 3.6e-187 659.4 874 50.3
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 7.9e-187 658.3 883 50.4
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 2.3e-186 656.8 895 51.1
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 3.9e-186 656.0 839 48.9
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 5.1e-186 655.6 872 50.8
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 8.8e-186 654.8 839 49.5
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.5e-185 654.1 866 49.9
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 5.7e-185 652.1 848 51.1
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 1.3e-184 651.0 920 46.8
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 3.7e-184 649.4 843 49.9
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 1.1e-183 647.9 875 49.8
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 5.3e-183 645.6 875 49.5
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 5.3e-183 645.6 879 49.4
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 1.7e-181 640.6 827 50.9
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 3.8e-181 639.4 864 50.0
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.1e-180 637.9 869 49.5
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 5.5e-180 635.6 859 49.4
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 9.4e-180 634.8 876 49.5
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 1.2e-179 634.4 868 49.2
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 3.0e-178 629.8 884 48.3
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 5.2e-178 629.0 839 50.5
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 6.7e-178 628.6 833 50.4
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.5e-177 625.2 876 49.1
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 4.8e-176 622.5 902 47.1
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 5.3e-175 619.0 822 50.2
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 9.1e-175 618.2 855 48.8
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 5.0e-173 612.5 863 48.0
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 6.5e-173 612.1 862 49.7
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 2.5e-172 610.1 842 49.2
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.2e-172 608.6 877 48.3
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 1.6e-171 607.4 878 49.4
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 2.7e-171 606.7 849 49.8
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 1.4e-170 604.4 801 48.9
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 1.5e-169 600.9 798 49.4
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 7.5e-169 598.6 765 51.0
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 2.8e-168 596.7 720 54.3
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 3.7e-168 596.3 830 49.8
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 5.9e-166 589.0 897 45.2
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 3.2e-164 583.2 763 49.0
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 2.3e-162 577.0 611 56.1
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.7e-160 570.9 867 45.9
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.2e-160 570.5 875 47.4
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 2.2e-160 570.5 852 45.5
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 2.8e-160 570.1 880 47.6
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 2.0e-158 563.9 847 47.9
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 3.8e-157 559.7 878 46.9
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 5.6e-156 555.8 789 48.2
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 2.2e-152 543.9 863 45.1
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 2.9e-152 543.5 846 45.3
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 8.3e-152 542.0 734 47.0
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 1.4e-151 541.2 882 45.1
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 1.8e-151 540.8 734 47.1
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 1.6e-150 537.7 864 45.4
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.2e-147 528.1 864 44.0
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 6.2e-147 525.8 799 45.4
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 3.1e-146 523.5 722 48.9
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 2.2e-144 517.3 661 51.4
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 4.9e-144 516.2 858 44.4
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.8e-142 508.8 865 43.2
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 6.8e-138 495.7 886 42.8
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 2.3e-133 480.7 865 41.3
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 1.5e-132 478.0 675 46.7
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 9.5e-132 475.3 724 47.8
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 9.5e-132 475.3 861 42.0
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 2.1e-131 474.2 708 48.0
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 2.0e-129 467.6 710 44.8
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 2.6e-129 467.2 733 47.1
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 4.9e-128 463.0 727 46.5
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.0e-125 455.3 728 44.6
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 2.8e-123 447.2 843 40.1
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 4.7e-123 446.4 739 45.1
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 6.9e-122 442.6 855 41.3
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.0e-117 428.7 859 37.7
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 7.3e-116 422.5 720 43.9
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 2.0e-113 414.5 718 44.4
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 3.3e-108 397.1 644 44.4
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 1.3e-101 375.2 704 39.8
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 1.8e-101 374.8 708 39.7
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 9.6e-100 369.0 707 42.3
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 1.5e-97 361.7 704 39.8
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 7.6e-97 359.4 708 39.1
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 1.0e-96 359.0 704 39.3
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 1.3e-91 342.0 660 38.2
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 1.1e-90 339.0 408 50.2
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 5.9e-89 333.2 319 60.8
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 5.9e-89 333.2 319 60.8
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 8.5e-88 329.3 756 38.9
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 8.8e-69 266.2 920 31.2
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 6.3e-67 260.0 989 29.6
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 1.0e-64 252.7 630 34.1
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 3.0e-61 241.1 505 39.4
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 4.4e-60 237.3 954 28.7
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 1.1e-58 232.6 701 31.2
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 7.0e-58 229.9 377 43.5
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 4.5e-57 227.3 649 29.6
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 3.0e-53 214.5 386 38.1
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 2.6e-44 184.9 274 46.7
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 4.1e-42 177.6 156 60.9
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 7.3e-39 166.8 408 36.0
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 4.1e-34 151.0 298 38.6
HanXRQChr03g0061701 Helianthus annuus HOM05D003640 ORTHO05D004439 7.8e-33 146.7 167 50.9
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 1.3e-32 146.0 121 63.6
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 1.3e-32 146.0 121 63.6
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 2.3e-32 145.2 117 71.8
HanXRQChr06g0170111 Helianthus annuus HOM05D003640 ORTHO05D004439 7.0e-26 123.6 117 56.4
HanXRQChr15g0479781 Helianthus annuus HOM05D003640 ORTHO05D004439 1.2e-25 122.9 117 56.4
Dinv35373 Davidia involucrata HOM05D003640 ORTHO05D004439 7.8e-25 120.2 82 75.6
Potri.016G069900 Populus trichocarpa HOM05D003640 ORTHO05D034990 6.8e-21 107.1 77 72.7
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.9e-18 99.0 82 57.3
C09p43560 Brassica napus HOM05D003640 ORTHO05D004439 3.1e-13 81.6 86 51.2
BolC9t57239H Brassica oleracea HOM05D003640 ORTHO05D004439 3.1e-13 81.6 86 51.2
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.2e-13 80.9 134 45.5
PGR042G3558 Punica granatum HOM05D000045 ORTHO05D000611 1.2e-12 79.7 139 41.7
BolC9t57241H Brassica oleracea HOM05D003640 ORTHO05D004439 7.6e-12 77.0 140 42.1
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 1.7e-11 75.9 97 54.6
CAN.G1387.1 Capsicum annuum HOM05D003640 ORTHO05D004439 7.1e-10 70.5 207 29.5
ECA232G0388 Erigeron canadensis HOM05D003640 ORTHO05D004439 7.1e-10 70.5 76 48.7
ECA233G3458 Erigeron canadensis HOM05D000153 ORTHO05D002648 7.1e-10 70.5 75 49.3
arahy.Tifrunner.gnm1.ann1.JKFZ9B Arachis hypogaea HOM05D003640 ORTHO05D082470 1.6e-09 69.3 61 59.0
C02p18030 Brassica napus HOM05D003640 ORTHO05D004439 2.1e-09 68.9 398 26.9
BolC2t07935H Brassica oleracea HOM05D003640 ORTHO05D004439 7.8e-09 67.0 329 27.7
CAN.G598.13 Capsicum annuum HOM05D003640 ORTHO05D004439 1.3e-08 66.2 183 32.8
MELO3C010660.2 Cucumis melo HOM05D003640 ORTHO05D004439 1.7e-08 65.9 45 71.1
HanXRQChr11g0343691 Helianthus annuus HOM05D000954 ORTHO05D016146 1.7e-08 65.9 34 88.2
PSO017G5262 Papaver somniferum HOM05D003640 ORTHO05D004439 1.7e-08 65.9 174 36.8
HanXRQChr09g0246151 Helianthus annuus HOM05D003640 ORTHO05D016146 8.7e-08 63.5 72 48.6
ECA234G0451 Erigeron canadensis HOM05D003640 ORTHO05D004439 9.6e-07 60.1 67 47.8
COL.COLO4_24960 Corchorus olitorius HOM05D003640 ORTHO05D004439 2.8e-06 58.5 89 43.8


User provided reference genes

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