Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00976 Erythranthe guttata HOM05D007779 ORTHO05D009863 1.4e-96 356.3 177 100.0
Migut.F01921 Erythranthe guttata HOM05D007779 ORTHO05D009863 2.8e-78 295.4 172 80.2
Migut.H01240 Erythranthe guttata HOM05D007779 ORTHO05D009863 2.8e-78 295.4 174 81.0
Migut.H00757 Erythranthe guttata HOM05D007779 ORTHO05D009863 5.6e-66 254.6 175 73.1
Migut.F02080 Erythranthe guttata HOM05D007779 ORTHO05D009863 3.0e-19 99.4 151 43.0
QL03p029097 Quercus lobata HOM05D007779 ORTHO05D009863 2.8e-17 92.8 136 39.0
Oeu016027.1 Olea europaea HOM05D007779 ORTHO05D009863 4.8e-17 92.0 137 40.1
Cpa.g.sc162.10 Carica papaya HOM05D007779 ORTHO05D009863 6.9e-16 88.2 136 36.8
Gohir.D08G234100 Gossypium hirsutum HOM05D007779 ORTHO05D009863 6.9e-16 88.2 135 40.0
Gorai.004G248800 Gossypium raimondii HOM05D007779 ORTHO05D009863 6.9e-16 88.2 135 40.0
A10p32150 Brassica napus HOM05D007779 ORTHO05D009863 2.6e-15 86.3 133 37.6
C09p72880 Brassica napus HOM05D007779 ORTHO05D009863 2.6e-15 86.3 133 37.6
BolC9t60024H Brassica oleracea HOM05D007779 ORTHO05D009863 2.6e-15 86.3 133 37.6
BraA10t45258Z Brassica rapa HOM05D007779 ORTHO05D009863 2.6e-15 86.3 133 37.6
Carub.0006s0291 Capsella rubella HOM05D007779 ORTHO05D009863 4.5e-15 85.5 135 34.8
Migut.F02081 Erythranthe guttata HOM05D007779 ORTHO05D009863 4.5e-15 85.5 140 36.4
MD12G1244700 Malus domestica HOM05D007779 ORTHO05D009863 4.5e-15 85.5 143 36.4
AT5G03970 Arabidopsis thaliana HOM05D007779 ORTHO05D009863 5.8e-15 85.1 143 34.3
Thhalv10013722m.g Eutrema salsugineum HOM05D007779 ORTHO05D009863 5.8e-15 85.1 145 34.5
Gohir.A08G217100 Gossypium hirsutum HOM05D007779 ORTHO05D009863 5.8e-15 85.1 135 39.3
Prupe.6G347200 Prunus persica HOM05D007779 ORTHO05D009863 7.6e-15 84.7 137 38.0
BcaC06g32099 Brassica carinata HOM05D007779 ORTHO05D009863 1.0e-14 84.3 133 37.6
Atru.chr2.884 Acer truncatum HOM05D007779 ORTHO05D009863 1.3e-14 84.0 144 36.1
CiPaw.07G070500 Carya illinoinensis HOM05D007779 ORTHO05D009863 1.7e-14 83.6 144 34.7
Sp6g38780 Schrenkiella parvula HOM05D007779 ORTHO05D009863 1.7e-14 83.6 132 34.8
Ciclev10019572m.g Citrus clementina HOM05D007779 ORTHO05D009863 2.9e-14 82.8 135 37.0
RcHm_v2.0_Chr3g0450221 Rosa chinensis HOM05D007779 ORTHO05D009863 2.9e-14 82.8 140 37.9
CARHR209310 Cardamine hirsuta HOM05D007779 ORTHO05D009863 3.8e-14 82.4 145 35.9
Haze_04390 Corylus avellana HOM05D007779 ORTHO05D009863 5.0e-14 82.0 136 36.0
Sed0018172 Sechium edule HOM05D007779 ORTHO05D009863 5.0e-14 82.0 131 35.1
TWI56G0837 Tripterygium wilfordii HOM05D007779 ORTHO05D009863 6.5e-14 81.6 136 36.8
Duzib177G0763 Durio zibethinus HOM05D007779 ORTHO05D009863 8.4e-14 81.3 135 37.0
AL6G13560 Arabidopsis lyrata HOM05D007779 ORTHO05D009863 1.1e-13 80.9 143 33.6
Cfa006387 Carpinus fangiana HOM05D007779 ORTHO05D009863 1.1e-13 80.9 136 36.0
Sabra19G0016500 Salix brachista HOM05D007779 ORTHO05D009863 1.1e-13 80.9 136 35.3
RcHm_v2.0_Chr3g0450231 Rosa chinensis HOM05D007779 ORTHO05D009863 2.5e-13 79.7 140 36.4
Aa31LG1G21350 Aethionema arabicum HOM05D007779 ORTHO05D009863 3.2e-13 79.3 143 35.0
Sabra19G0026600 Salix brachista HOM05D007779 ORTHO05D009863 7.2e-13 78.2 133 35.3
Thecc.05G277100 Theobroma cacao HOM05D007779 ORTHO05D009863 7.2e-13 78.2 135 36.3
arahy.Tifrunner.gnm1.ann1.C2UZEY Arachis hypogaea HOM05D007779 ORTHO05D009863 9.3e-13 77.8 135 35.6
Potri.019G013900 Populus trichocarpa HOM05D007779 ORTHO05D009863 9.3e-13 77.8 136 35.3
THA.LOC104805831 Tarenaya hassleriana HOM05D007779 ORTHO05D009863 1.2e-12 77.4 136 35.3
arahy.Tifrunner.gnm1.ann1.DL8VF6 Arachis hypogaea HOM05D007779 ORTHO05D009863 1.6e-12 77.0 135 35.6
BcaB05g21790 Brassica carinata HOM05D007779 ORTHO05D009863 1.6e-12 77.0 134 34.3
FAN02G2389 Fragaria x ananassa HOM05D007779 ORTHO05D009863 2.1e-12 76.6 140 38.6
FAN05G4719 Fragaria x ananassa HOM05D007779 ORTHO05D009863 2.1e-12 76.6 138 37.7
FAN05G5524 Fragaria x ananassa HOM05D007779 ORTHO05D009863 2.1e-12 76.6 138 37.7
FvH4_6g02440 Fragaria vesca HOM05D007779 ORTHO05D009863 2.7e-12 76.3 137 36.5
Sed0024421 Sechium edule HOM05D007779 ORTHO05D009863 3.5e-12 75.9 131 36.6
FAN14G0926 Fragaria x ananassa HOM05D007779 ORTHO05D009863 4.6e-12 75.5 137 35.8
FAN14G4661 Fragaria x ananassa HOM05D007779 ORTHO05D009863 4.6e-12 75.5 137 35.8
Glyma.19G246800 Glycine max HOM05D007779 ORTHO05D009863 6.1e-12 75.1 135 35.6
Lj1g0005336 Lotus japonicus HOM05D007779 ORTHO05D009863 7.9e-12 74.7 132 35.6
Oeu062739.1 Olea europaea HOM05D007779 ORTHO05D009863 7.9e-12 74.7 114 34.2
Glyma.03G249350 Glycine max HOM05D007779 ORTHO05D009863 2.3e-11 73.2 135 34.1
FAN09G2319 Fragaria x ananassa HOM05D007779 ORTHO05D009863 3.0e-11 72.8 137 35.0
Phvul.006G104000 Phaseolus vulgaris HOM05D007779 ORTHO05D009863 3.9e-11 72.4 148 31.1
MELO3C004412.2 Cucumis melo HOM05D007779 ORTHO05D009863 5.1e-11 72.0 140 34.3
CsaV3_2G003840 Cucumis sativus L. HOM05D007779 ORTHO05D009863 8.7e-11 71.2 140 33.6
BolC8t51306H Brassica oleracea HOM05D007779 ORTHO05D009863 1.1e-10 70.9 140 34.3
ClCG02G016930 Citrullus lanatus HOM05D007779 ORTHO05D009863 1.1e-10 70.9 131 34.4
BraA09t40853Z Brassica rapa HOM05D007779 ORTHO05D009863 1.9e-10 70.1 139 35.3
COL.COLO4_08350 Corchorus olitorius HOM05D007779 ORTHO05D009863 4.3e-10 68.9 136 33.8
COL.COLO4_15414 Corchorus olitorius HOM05D007779 ORTHO05D009863 4.3e-10 68.9 134 32.8
COL.COLO4_08348 Corchorus olitorius HOM05D007779 ORTHO05D009863 5.7e-10 68.6 136 33.8
Medtr7g115440 Medicago truncatula HOM05D007779 ORTHO05D009863 7.4e-10 68.2 135 31.1
A09p54400 Brassica napus HOM05D007779 ORTHO05D009863 9.7e-10 67.8 139 33.8
Ca_09436_v3 Cicer arietinum L. HOM05D007779 ORTHO05D009863 9.7e-10 67.8 135 34.1
TPR.G6996 Trifolium pratense HOM05D007779 ORTHO05D009863 1.3e-09 67.4 135 31.9
BcaC07g42760 Brassica carinata HOM05D007779 ORTHO05D009863 3.7e-09 65.9 139 27.3
C08p37280 Brassica napus HOM05D007779 ORTHO05D009863 3.7e-09 65.9 129 34.9
VMungo0540G1456 Vigna mungo HOM05D007779 ORTHO05D009863 4.8e-09 65.5 148 31.1
Psat0s3161g0280 Pisum sativum HOM05D007779 ORTHO05D009863 3.1e-08 62.8 135 31.9
Oeu016715.1 Olea europaea HOM05D000007 ORTHO05D000017 9.0e-08 61.2 147 30.6
PSO210G4092 Papaver somniferum HOM05D008326 ORTHO05D001155 1.2e-07 60.8 141 31.2
PSO675G7142 Papaver somniferum HOM05D008326 ORTHO05D001155 2.0e-07 60.1 145 33.1
CSS0031662 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 2.6e-07 59.7 134 29.1
Manes.14G038100 Manihot esculenta HOM05D000664 ORTHO05D000491 4.5e-07 58.9 147 32.0
CSS0006010 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 5.9e-07 58.5 141 27.0
Nitab4.5_0002322g0190 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.7e-06 57.0 61 39.3
COL.COLO4_38551 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.2e-06 56.6 141 29.8
Gohir.D13G101806 Gossypium hirsutum HOM05D000664 ORTHO05D000491 2.2e-06 56.6 138 29.7
Gorai.013G114100 Gossypium raimondii HOM05D000664 ORTHO05D000491 2.2e-06 56.6 138 29.7
CSS0003240 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 2.9e-06 56.2 140 26.4
COL.COLO4_21632 Corchorus olitorius HOM05D000007 ORTHO05D013584 2.9e-06 56.2 142 29.6
Lj6C666T13 Lonicera japonica HOM05D000007 ORTHO05D000017 2.9e-06 56.2 125 31.2
Rhsim10G0184300 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.9e-06 56.2 146 30.8
Nitab4.5_0004217g0020 Nicotiana tabacum HOM05D000664 ORTHO05D000491 3.8e-06 55.8 61 39.3
Aqoxy2G02516 Aquilegia oxysepala HOM05D007779 ORTHO05D009863 5.0e-06 55.5 155 25.2
Gohir.A13G096800 Gossypium hirsutum HOM05D000664 ORTHO05D000491 5.0e-06 55.5 138 29.0
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 6.5e-06 55.1 150 29.3
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 6.5e-06 55.1 141 31.9
COL.COLO4_21631 Corchorus olitorius HOM05D000007 ORTHO05D013584 8.5e-06 54.7 141 27.7


User provided reference genes

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