Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00935 Erythranthe guttata HOM05D007710 ORTHO05D004022 8.6e-53 209.9 97 100.0
THA.LOC104805715 Tarenaya hassleriana HOM05D007710 ORTHO05D004022 7.3e-36 153.7 82 82.9
GSVIVG01024345001 Vitis vinifera HOM05D007710 ORTHO05D004022 2.1e-35 152.1 87 80.5
MD01G1238100 Malus domestica HOM05D007710 ORTHO05D004022 4.8e-35 151.0 88 78.4
MD01G1238400 Malus domestica HOM05D007710 ORTHO05D004022 6.2e-35 150.6 88 78.4
unitig_747.g21335 Utricularia gibba HOM05D007710 ORTHO05D004022 6.2e-35 150.6 96 75.0
FAN03G2015 Fragaria x ananassa HOM05D007710 ORTHO05D004022 1.8e-34 149.1 87 75.9
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 2.4e-34 148.7 86 77.9
Ciclev10033194m.g Citrus clementina HOM05D007710 ORTHO05D004022 3.1e-34 148.3 86 75.6
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 3.1e-34 148.3 87 75.9
Potri.013G078866 Populus trichocarpa HOM05D007710 ORTHO05D004022 5.3e-34 147.5 85 76.5
RcHm_v2.0_Chr1g0384511 Rosa chinensis HOM05D007710 ORTHO05D004022 5.3e-34 147.5 86 77.9
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 6.9e-34 147.1 83 80.7
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 6.9e-34 147.1 85 78.8
Atru.chr12.1914 Acer truncatum HOM05D007710 ORTHO05D004022 9.0e-34 146.7 86 74.4
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 9.0e-34 146.7 85 76.5
arahy.Tifrunner.gnm1.ann1.GY8AT6 Arachis hypogaea HOM05D007710 ORTHO05D004022 1.2e-33 146.4 86 75.6
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 1.2e-33 146.4 78 84.6
Manes.08G064400 Manihot esculenta HOM05D007710 ORTHO05D004022 1.2e-33 146.4 85 76.5
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 1.2e-33 146.4 95 72.6
arahy.Tifrunner.gnm1.ann1.U0IDC3 Arachis hypogaea HOM05D007710 ORTHO05D004022 1.5e-33 146.0 86 75.6
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 1.5e-33 146.0 78 84.6
AUR62028202 Chenopodium quinoa HOM05D007710 ORTHO05D004022 1.5e-33 146.0 93 72.0
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 1.5e-33 146.0 87 75.9
Peaxi162Scf00516g00641 Petunia axillaris HOM05D007710 ORTHO05D004022 1.5e-33 146.0 85 77.6
CAN.G1131.30 Capsicum annuum HOM05D007710 ORTHO05D004022 2.0e-33 145.6 85 76.5
PGSC0003DMG400003164 Solanum tuberosum HOM05D007710 ORTHO05D004022 2.0e-33 145.6 82 79.3
PGSC0003DMG402026486 Solanum tuberosum HOM05D007710 ORTHO05D004022 2.0e-33 145.6 82 79.3
Phvul.011G019000 Phaseolus vulgaris HOM05D007710 ORTHO05D004022 2.6e-33 145.2 80 81.2
Aa31LG2G2200 Aethionema arabicum HOM05D007710 ORTHO05D004022 3.4e-33 144.8 86 76.7
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 4.5e-33 144.4 86 77.9
Thecc.05G219200 Theobroma cacao HOM05D007710 ORTHO05D004022 4.5e-33 144.4 97 71.1
Sopen03g027960 Solanum pennellii HOM05D007710 ORTHO05D004022 5.8e-33 144.1 82 78.0
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 7.6e-33 143.7 84 76.2
Manes.09G128500 Manihot esculenta HOM05D007710 ORTHO05D004022 9.9e-33 143.3 84 76.2
TWI32G0404 Tripterygium wilfordii HOM05D007710 ORTHO05D004022 9.9e-33 143.3 82 78.0
EL10Ac3g05053 Beta vulgaris HOM05D007710 ORTHO05D004022 1.3e-32 142.9 82 78.0
Duzib128G0150 Durio zibethinus HOM05D007710 ORTHO05D004022 1.3e-32 142.9 85 76.5
Gohir.A13G101700 Gossypium hirsutum HOM05D007710 ORTHO05D004022 1.3e-32 142.9 85 76.5
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 1.7e-32 142.5 80 78.8
AT1G65000 Arabidopsis thaliana HOM05D007710 ORTHO05D004022 1.7e-32 142.5 84 76.2
CSS0005120 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 1.7e-32 142.5 86 74.4
CSS0038916 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 1.7e-32 142.5 86 74.4
FAN10G2135 Fragaria x ananassa HOM05D003442 ORTHO05D004005 1.7e-32 142.5 87 73.6
MD06G1024400 Malus domestica HOM05D007710 ORTHO05D004022 1.7e-32 142.5 88 75.0
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 1.7e-32 142.5 97 68.0
Solyc03g097200.3 Solanum lycopersicum HOM05D007710 ORTHO05D004022 1.7e-32 142.5 82 76.8
AL2G19620 Arabidopsis lyrata HOM05D007710 ORTHO05D004022 2.2e-32 142.1 84 76.2
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 2.2e-32 142.1 85 74.1
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 2.2e-32 142.1 84 75.0
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 2.9e-32 141.7 87 73.6
Hund09805 Selenicereus undatus HOM05D007710 ORTHO05D004022 4.9e-32 141.0 86 76.7
BolC6t38987H Brassica oleracea HOM05D007710 ORTHO05D004022 6.4e-32 140.6 89 75.3
CARHR056450 Cardamine hirsuta HOM05D007710 ORTHO05D004022 6.4e-32 140.6 78 80.8
MELO3C021857.2 Cucumis melo HOM05D007710 ORTHO05D004022 6.4e-32 140.6 91 70.3
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 8.4e-32 140.2 89 73.0
Glyma.12G016700 Glycine max HOM05D007710 ORTHO05D004022 1.1e-31 139.8 80 77.5
Medtr4g478210 Medicago truncatula HOM05D007710 ORTHO05D004022 1.1e-31 139.8 101 67.3
CARHR057330 Cardamine hirsuta HOM05D007710 ORTHO05D004022 1.4e-31 139.4 78 80.8
Sed0013213 Sechium edule HOM05D007710 ORTHO05D004022 1.4e-31 139.4 78 78.2
TPR.G19627 Trifolium pratense HOM05D007710 ORTHO05D004022 1.4e-31 139.4 88 70.5
Psat7g170120 Pisum sativum HOM05D007710 ORTHO05D004022 2.4e-31 138.7 80 77.5
Hma1.2p1_0649F.1_g195220 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 3.2e-31 138.3 78 78.2
Lj3g0011322 Lotus japonicus HOM05D007710 ORTHO05D004022 4.2e-31 137.9 97 64.9
HPP92_014617 Vanilla planifolia HOM05D007710 ORTHO05D004022 5.4e-31 137.5 85 71.8
Mapoly0120s0048 Marchantia polymorpha HOM05D007710 ORTHO05D004022 7.1e-31 137.1 79 75.9
HanXRQChr04g0105361 Helianthus annuus HOM05D007710 ORTHO05D004022 9.3e-31 136.7 96 64.6
CsaV3_2G036650 Cucumis sativus L. HOM05D007710 ORTHO05D004022 1.2e-30 136.3 86 70.9
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 1.2e-30 136.3 78 78.2
TAR375G0377 Trochodendron aralioides HOM05D007710 ORTHO05D004022 1.6e-30 136.0 99 66.7
Aqoxy3G02299 Aquilegia oxysepala HOM05D007710 ORTHO05D004022 2.7e-30 135.2 78 76.9
C06p38950 Brassica napus HOM05D007710 ORTHO05D004022 2.7e-30 135.2 89 71.9
PSO782G0287 Papaver somniferum HOM05D007710 ORTHO05D004022 3.5e-30 134.8 78 76.9
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 4.6e-30 134.4 80 76.2
Nn6g33555 Nelumbo nucifera HOM05D007710 ORTHO05D004022 1.0e-29 133.3 90 67.8
ATR0057G097 Amborella trichopoda HOM05D007710 ORTHO05D004022 8.7e-29 130.2 80 71.2
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 2.8e-27 125.2 84 67.9
Ah.04g156350 Amaranthus hybridus HOM05D007710 ORTHO05D004022 2.6e-25 118.6 137 46.7
Rhsim03G0223400 Rhododendron simsii HOM05D007710 ORTHO05D004022 2.6e-25 118.6 132 47.7
RcHm_v2.0_Chr2g0135851 Rosa chinensis HOM05D007710 ORTHO05D004022 8.2e-19 97.1 81 59.3
SMO347G0449 Selaginella moellendorffii HOM05D007710 ORTHO05D004022 6.9e-18 94.0 79 57.0
SalBow2G0781 Salvia bowleyana HOM05D007710 ORTHO05D004022 1.7e-16 89.4 41 92.7
ClCG09G017200 Citrullus lanatus HOM05D007710 ORTHO05D004022 1.1e-15 86.7 194 31.4
Hma1.2p1_0649F.1_g195210 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 7.1e-15 84.0 43 79.1
Glyma.11G108600 Glycine max HOM05D007710 ORTHO05D004022 4.6e-14 81.3 42 78.6
Os03g0857750 Oryza sativa ssp. japonica HOM05D007710 ORTHO05D004022 6.7e-13 77.4 42 76.2
COL.COLO4_15187 Corchorus olitorius HOM05D007710 ORTHO05D004022 1.1e-12 76.6 41 78.0
MSTRG.6 Avicennia marina HOM05D007710 ORTHO05D004022 1.9e-12 75.9 63 63.5
Sc09g0007050 Simmondsia chinensis HOM05D007710 ORTHO05D004022 7.4e-12 73.9 57 63.2
FAN01G0952 Fragaria x ananassa HOM05D002657 ORTHO05D003059 1.4e-10 69.7 46 67.4
QL09p021214 Quercus lobata HOM05D007710 ORTHO05D004022 2.4e-10 68.9 48 68.8
SalBow2G2426 Salvia bowleyana HOM05D007710 ORTHO05D004022 2.0e-09 65.9 58 58.6
ECA238G3641 Erigeron canadensis HOM05D007710 ORTHO05D004022 4.5e-09 64.7 43 62.8
Dinv29135 Davidia involucrata HOM05D007710 ORTHO05D004022 2.5e-07 58.9 32 78.1
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 2.5e-07 58.9 81 40.7
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 4.2e-07 58.2 90 36.7
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 4.2e-07 58.2 89 37.1
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 7.2e-07 57.4 81 37.0
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 7.2e-07 57.4 81 38.3
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 9.3e-07 57.0 81 38.3
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.2e-06 56.6 90 38.9
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 1.2e-06 56.6 89 36.0
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 1.6e-06 56.2 81 38.3
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 2.1e-06 55.8 81 35.8
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 2.1e-06 55.8 81 37.0
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 2.1e-06 55.8 81 37.0
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 2.1e-06 55.8 81 37.0
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 2.7e-06 55.5 93 34.4
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 2.7e-06 55.5 93 34.4
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 2.7e-06 55.5 93 34.4
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 2.7e-06 55.5 93 34.4
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 3.6e-06 55.1 81 35.8
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 4.6e-06 54.7 83 34.9
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 6.1e-06 54.3 81 34.6
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 6.1e-06 54.3 90 34.4
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 6.1e-06 54.3 79 35.4
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 6.1e-06 54.3 90 37.8
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 7.9e-06 53.9 90 34.4
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 7.9e-06 53.9 90 34.4
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 7.9e-06 53.9 87 33.3
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 7.9e-06 53.9 90 34.4
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 7.9e-06 53.9 84 35.7
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 7.9e-06 53.9 81 38.3


User provided reference genes

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