Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 5.9e-135 484.2 243 100.0
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 7.1e-112 407.5 241 81.7
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 9.2e-112 407.1 236 81.8
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 6.6e-110 401.0 236 80.5
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 3.1e-107 392.1 240 77.5
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 2.6e-106 389.0 240 76.7
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 1.3e-105 386.7 242 76.0
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 1.3e-105 386.7 242 76.9
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 1.7e-105 386.3 240 77.1
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 2.2e-105 386.0 242 77.3
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 6.4e-105 384.4 240 75.4
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 5.4e-104 381.3 241 76.3
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 7.1e-104 380.9 239 75.7
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.1e-103 379.4 240 75.0
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 2.7e-103 379.0 240 75.0
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 2.7e-103 379.0 240 74.6
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.0e-102 377.1 240 76.2
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 3.0e-102 375.6 242 74.0
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 6.6e-102 374.4 240 75.8
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 1.1e-101 373.6 240 75.4
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 1.9e-101 372.9 240 75.4
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 2.5e-101 372.5 240 75.4
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 3.3e-101 372.1 240 75.0
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 5.6e-101 371.3 286 64.3
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 9.6e-101 370.5 239 72.0
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.8e-100 369.0 237 74.3
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.6e-100 368.6 240 73.3
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 3.6e-100 368.6 236 73.3
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 6.2e-100 367.9 242 72.7
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 6.2e-100 367.9 239 71.5
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 1.1e-99 367.1 242 72.7
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.4e-99 366.7 240 73.8
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 3.1e-99 365.5 241 72.2
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 4.0e-99 365.2 240 72.1
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 4.0e-99 365.2 236 73.3
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 4.4e-98 361.7 236 72.9
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 5.8e-98 361.3 238 71.8
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 7.6e-98 360.9 237 71.7
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 9.9e-98 360.5 234 72.6
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 3.8e-97 358.6 242 73.6
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 8.4e-97 357.5 241 72.2
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 1.1e-96 357.1 240 70.0
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 2.4e-96 355.9 240 69.2
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.4e-96 355.9 254 69.3
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 2.7e-95 352.4 240 70.8
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 2.7e-95 352.4 237 70.0
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 6.0e-95 351.3 241 69.7
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 6.0e-95 351.3 242 69.8
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 3.9e-94 348.6 237 71.3
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 6.6e-94 347.8 240 68.3
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 8.7e-94 347.4 240 69.2
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 1.5e-93 346.7 241 66.0
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 3.3e-93 345.5 241 67.2
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.3e-92 343.6 242 69.8
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 1.6e-92 343.2 237 68.4
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.1e-92 342.8 241 66.0
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 3.6e-92 342.0 241 66.4
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 4.8e-92 341.7 234 69.7
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 8.1e-92 340.9 234 67.9
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 1.1e-91 340.5 239 67.4
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 1.2e-90 337.0 240 67.9
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 1.5e-90 336.7 238 70.6
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 3.4e-90 335.5 238 68.1
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 5.8e-90 334.7 242 69.0
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 9.9e-90 334.0 224 67.9
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 1.7e-89 333.2 238 66.0
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 1.7e-89 333.2 238 67.6
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 8.4e-89 330.9 241 70.1
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 1.1e-88 330.5 273 62.6
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 4.2e-88 328.6 235 66.0
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 1.2e-87 327.0 237 64.6
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 1.6e-87 326.6 241 67.6
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 2.1e-87 326.2 240 63.8
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 7.9e-87 324.3 240 65.0
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 3.9e-86 322.0 240 64.6
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 3.9e-86 322.0 236 64.0
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 5.1e-86 321.6 240 64.6
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 5.1e-86 321.6 240 64.2
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 6.7e-86 321.2 240 64.6
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.9e-85 319.7 240 64.6
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.6e-84 316.6 240 63.8
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 1.1e-83 313.9 240 67.9
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.7e-81 306.6 239 61.1
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 1.0e-78 297.4 182 74.7
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 3.3e-77 292.4 182 76.4
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 4.3e-77 292.0 187 72.2
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 7.4e-77 291.2 180 71.7
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.8e-76 289.3 232 56.9
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 8.2e-76 287.7 232 56.5
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.1e-72 277.3 233 60.9
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 2.5e-72 276.2 183 72.7
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.3e-70 269.6 180 71.1
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 2.3e-70 269.6 182 71.4
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 9.0e-67 257.7 240 50.0
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.5e-66 256.9 241 49.4
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 1.3e-65 253.8 181 66.3
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 5.0e-65 251.9 184 67.9
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.1e-64 250.8 206 62.1
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 9.4e-64 247.7 228 52.2
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 5.3e-59 231.9 205 53.7
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 6.9e-59 231.5 175 67.4
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.5e-58 230.3 229 51.1
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 2.2e-57 226.5 230 47.4
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.2e-55 220.7 250 45.6
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.6e-55 220.3 215 48.8
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 7.0e-51 204.9 147 61.2
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 3.8e-49 199.1 109 78.9
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 2.0e-45 186.8 179 45.3
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 8.0e-39 164.9 181 48.6
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 3.4e-29 132.9 106 66.0
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 2.2e-28 130.2 207 32.9
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.5e-21 107.5 73 72.6
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 1.5e-21 107.5 269 26.4


User provided reference genes

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