Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 1.2e-141 506.5 261 100.0
Migut.F00864 Erythranthe guttata HOM05D012249 ORTHO05D014194 2.3e-108 396.0 214 97.7
SalBow3G2935 Salvia bowleyana HOM05D012249 ORTHO05D014194 4.2e-46 189.1 232 47.0
SalBow5G4205 Salvia bowleyana HOM05D012249 ORTHO05D014194 9.2e-41 171.4 239 42.3
SGA_v2.0_scaffold71G23917 Striga asiatica HOM05D012249 ORTHO05D014194 1.2e-29 134.4 226 38.1
Oeu037519.1 Olea europaea HOM05D012249 ORTHO05D014194 1.3e-23 114.4 230 37.8
SGA_v2.0_scaffold122G33311 Striga asiatica HOM05D012249 ORTHO05D014194 1.1e-20 104.8 191 39.8
SalBow5G4839 Salvia bowleyana HOM05D012249 ORTHO05D014194 4.4e-19 99.4 135 41.5
Cc02_g08260 Coffea canephora HOM05D012249 ORTHO05D014194 3.0e-15 86.7 230 30.9
Oeu030222.1 Olea europaea HOM05D012249 ORTHO05D014194 1.1e-14 84.7 183 34.4
Solyc06g084340.1 Solanum lycopersicum HOM05D015379 ORTHO05D017769 6.8e-12 75.5 219 26.9
Actinidia21095 Actinidia chinensis HOM05D030391 ORTHO05D010368 2.6e-11 73.6 149 30.9
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 2.6e-11 73.6 35 94.3
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 7.6e-11 72.0 35 91.4
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 9.9e-11 71.6 35 91.4
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 9.9e-11 71.6 35 91.4
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 1.3e-10 71.2 42 76.2
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 1.3e-10 71.2 35 91.4
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 1.3e-10 71.2 35 91.4
unitig_26.g10156 Utricularia gibba HOM05D012249 ORTHO05D014194 2.2e-10 70.5 216 27.8
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 2.9e-10 70.1 35 88.6
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 2.9e-10 70.1 35 88.6
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 2.9e-10 70.1 35 88.6
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 2.9e-10 70.1 35 88.6
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 3.8e-10 69.7 35 88.6
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 3.8e-10 69.7 35 88.6
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 3.8e-10 69.7 35 88.6
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 3.8e-10 69.7 35 88.6
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 3.8e-10 69.7 35 88.6
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 3.8e-10 69.7 35 88.6
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 3.8e-10 69.7 35 88.6
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 3.8e-10 69.7 35 88.6
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 4.9e-10 69.3 35 88.6
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 4.9e-10 69.3 35 88.6
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 4.9e-10 69.3 35 85.7
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 6.4e-10 68.9 35 85.7
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 8.4e-10 68.6 35 85.7
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 8.4e-10 68.6 35 85.7
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 8.4e-10 68.6 35 85.7
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 8.4e-10 68.6 35 85.7
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 8.4e-10 68.6 35 88.6
Sed0006744 Sechium edule HOM05D029525 ORTHO05D010368 8.4e-10 68.6 61 49.2
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 8.4e-10 68.6 35 85.7
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 8.4e-10 68.6 35 85.7
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 1.1e-09 68.2 35 85.7
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 1.1e-09 68.2 35 88.6
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 1.1e-09 68.2 35 82.9
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 1.4e-09 67.8 35 82.9
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.9e-09 67.4 35 82.9
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.9e-09 67.4 35 85.7
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.9e-09 67.4 35 82.9
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.9e-09 67.4 35 85.7
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.9e-09 67.4 35 82.9
ClCG09G006850 Citrullus lanatus HOM05D029525 ORTHO05D010368 2.4e-09 67.0 85 41.2
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 2.4e-09 67.0 34 88.2
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 2.4e-09 67.0 35 82.9
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 2.4e-09 67.0 35 82.9
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 2.4e-09 67.0 35 82.9
CSS0027010 Camellia sinensis var. sinensis HOM05D030391 ORTHO05D010368 3.2e-09 66.6 246 25.2
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 3.2e-09 66.6 35 80.0
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.2e-09 66.6 35 80.0
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.2e-09 66.6 35 80.0
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.2e-09 66.6 35 80.0
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.2e-09 66.6 35 80.0
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 3.2e-09 66.6 35 82.9
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 3.2e-09 66.6 35 82.9
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 3.2e-09 66.6 35 82.9
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 4.1e-09 66.2 35 82.9
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 4.1e-09 66.2 35 82.9
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 4.1e-09 66.2 35 85.7
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 5.4e-09 65.9 35 82.9
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 7.1e-09 65.5 35 80.0
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 7.1e-09 65.5 35 80.0
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 9.2e-09 65.1 35 80.0
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 9.2e-09 65.1 35 82.9
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 9.2e-09 65.1 35 82.9
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 1.2e-08 64.7 35 80.0
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.2e-08 64.7 35 80.0
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 1.2e-08 64.7 35 80.0
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 1.2e-08 64.7 35 80.0
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 1.2e-08 64.7 35 80.0
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 1.6e-08 64.3 35 80.0
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.6e-08 64.3 35 80.0
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.6e-08 64.3 35 80.0
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 1.6e-08 64.3 35 80.0
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 1.6e-08 64.3 35 82.9
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 2.1e-08 63.9 35 82.9
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 2.1e-08 63.9 35 74.3
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 2.1e-08 63.9 35 80.0
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 3.5e-08 63.2 35 80.0
CsaV3_7G028570 Cucumis sativus L. HOM05D029525 ORTHO05D010368 3.5e-08 63.2 61 47.5
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 3.5e-08 63.2 35 80.0
QL12p022735 Quercus lobata HOM05D010143 ORTHO05D010368 3.5e-08 63.2 89 37.1
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 3.5e-08 63.2 35 82.9
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 4.6e-08 62.8 35 74.3
Potri.004G144200 Populus trichocarpa HOM05D010143 ORTHO05D010368 4.6e-08 62.8 80 37.5
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 4.6e-08 62.8 35 77.1
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 4.6e-08 62.8 35 77.1
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 6.0e-08 62.4 35 77.1
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 6.0e-08 62.4 35 74.3
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 6.0e-08 62.4 35 71.4
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 6.0e-08 62.4 35 71.4
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 6.0e-08 62.4 35 71.4
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 7.8e-08 62.0 35 74.3
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 1.0e-07 61.6 35 77.1
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 1.3e-07 61.2 35 74.3
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 1.3e-07 61.2 35 74.3
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 1.3e-07 61.2 35 74.3
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 1.3e-07 61.2 35 74.3
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 1.3e-07 61.2 35 74.3
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.3e-07 61.2 35 74.3
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 1.3e-07 61.2 35 74.3
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 1.7e-07 60.8 35 71.4
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 1.7e-07 60.8 35 74.3
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 1.7e-07 60.8 35 77.1
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 2.3e-07 60.5 35 74.3
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 2.3e-07 60.5 35 71.4
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 2.3e-07 60.5 35 71.4
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 2.3e-07 60.5 35 71.4
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 2.3e-07 60.5 35 71.4
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 2.3e-07 60.5 35 71.4
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 3.0e-07 60.1 35 74.3
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 3.0e-07 60.1 35 74.3
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 3.9e-07 59.7 35 68.6
Haze_05094 Corylus avellana HOM05D010143 ORTHO05D010368 3.9e-07 59.7 74 41.9
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 3.9e-07 59.7 35 71.4
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 6.6e-07 58.9 35 68.6
AL7G29470 Arabidopsis lyrata HOM05D010390 ORTHO05D012282 1.5e-06 57.8 101 33.7
Oeu026610.1 Olea europaea HOM05D012249 ORTHO05D014194 1.5e-06 57.8 111 37.8
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 1.5e-06 57.8 34 70.6
Aa31LG1G15860 Aethionema arabicum HOM05D010390 ORTHO05D012282 1.9e-06 57.4 106 29.2
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 1.9e-06 57.4 35 65.7
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 1.9e-06 57.4 35 65.7
QL05p060436 Quercus lobata HOM05D012615 ORTHO05D010044 1.9e-06 57.4 63 41.3
Atru.chr5.1357 Acer truncatum HOM05D000520 ORTHO05D010368 2.5e-06 57.0 73 32.9
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 2.5e-06 57.0 32 71.9
Oeu001437.1 Olea europaea HOM05D012249 ORTHO05D014194 2.5e-06 57.0 221 25.8
Prupe.8G245300 Prunus persica HOM05D019654 ORTHO05D010368 2.5e-06 57.0 73 39.7
Sp1g26300 Schrenkiella parvula HOM05D010390 ORTHO05D012282 3.3e-06 56.6 82 32.9
Actinidia23478 Actinidia chinensis HOM05D000520 ORTHO05D000399 4.3e-06 56.2 103 34.0
AL5G45950 Arabidopsis lyrata HOM05D035404 ORTHO05D023685 4.3e-06 56.2 74 32.4
AT4G23882 Arabidopsis thaliana HOM05D010390 ORTHO05D012282 4.3e-06 56.2 106 34.0
BcaB07g32656 Brassica carinata HOM05D010390 ORTHO05D012282 4.3e-06 56.2 68 35.3
Prupe.7G246000 Prunus persica HOM05D019654 ORTHO05D010368 4.3e-06 56.2 61 41.0
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 5.6e-06 55.8 32 68.8
Carub.0001s2868 Capsella rubella HOM05D010390 ORTHO05D012282 5.6e-06 55.8 71 35.2
Cfa004858 Carpinus fangiana HOM05D012249 ORTHO05D010368 5.6e-06 55.8 80 36.2
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 7.3e-06 55.5 32 68.8
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 7.3e-06 55.5 32 68.8
Haze_04748 Corylus avellana HOM05D027832 ORTHO05D010368 7.3e-06 55.5 65 41.5
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 7.3e-06 55.5 35 68.6
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 9.6e-06 55.1 36 69.4
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 9.6e-06 55.1 33 69.7


User provided reference genes

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