Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 1.3e-105 386.3 191 100.0
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 3.4e-77 292.0 191 73.8
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.1e-75 287.0 191 70.7
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 3.5e-74 282.0 191 68.6
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 7.8e-74 280.8 191 69.1
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.6e-71 273.1 185 69.7
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 6.2e-71 271.2 189 72.5
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 6.9e-70 267.7 181 74.6
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 9.0e-70 267.3 190 67.9
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 2.0e-69 266.2 177 70.6
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 2.0e-69 266.2 178 75.3
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 4.9e-68 261.5 178 70.8
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.4e-67 260.0 189 67.2
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 3.2e-67 258.8 188 66.5
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 5.4e-67 258.1 178 68.5
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.2e-66 256.9 168 73.8
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 1.2e-66 256.9 178 69.1
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 2.1e-66 256.1 184 67.9
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 2.7e-66 255.8 181 71.8
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 2.7e-66 255.8 179 69.3
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 3.5e-66 255.4 168 73.2
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 4.6e-66 255.0 183 65.6
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 6.0e-66 254.6 186 66.7
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 6.0e-66 254.6 168 73.2
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 5.1e-65 251.5 174 69.0
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 8.7e-65 250.8 185 64.9
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 1.5e-64 250.0 169 68.6
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 1.5e-64 250.0 181 67.4
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 1.5e-64 250.0 256 53.1
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.9e-64 249.6 184 65.8
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 1.9e-64 249.6 180 67.8
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.9e-64 249.6 180 68.3
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 3.3e-64 248.8 177 69.5
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 4.3e-64 248.4 191 64.4
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 5.6e-64 248.1 169 68.0
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 7.4e-64 247.7 165 70.3
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 9.6e-64 247.3 175 66.3
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 9.6e-64 247.3 174 66.7
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 1.3e-63 246.9 183 66.1
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 1.3e-63 246.9 178 69.1
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 6.2e-63 244.6 175 65.7
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.4e-62 243.4 181 63.5
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.8e-62 243.0 189 65.6
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 2.4e-62 242.7 174 66.7
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 3.1e-62 242.3 183 62.8
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 5.3e-62 241.5 169 68.6
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 5.3e-62 241.5 185 62.7
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 1.2e-61 240.4 187 61.0
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 1.2e-61 240.4 180 63.3
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 4.5e-61 238.4 189 64.0
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 4.5e-61 238.4 168 67.3
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 7.6e-61 237.7 157 71.3
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.7e-60 236.5 169 65.7
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 2.9e-60 235.7 195 59.5
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 4.9e-60 235.0 166 68.1
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 4.9e-60 235.0 169 64.5
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 8.4e-60 234.2 191 62.8
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 1.1e-59 233.8 166 67.5
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 1.1e-59 233.8 169 64.5
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.1e-59 233.8 157 67.5
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 1.4e-59 233.4 220 55.0
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 9.3e-59 230.7 167 68.3
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 1.2e-58 230.3 177 63.8
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 1.2e-58 230.3 167 68.3
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 1.2e-58 230.3 177 63.8
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.2e-58 230.3 158 67.1
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 1.2e-58 230.3 172 65.1
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 1.2e-58 230.3 156 66.7
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.6e-58 229.9 190 62.1
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.6e-58 229.9 169 66.9
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 2.7e-58 229.2 191 60.7
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 4.6e-58 228.4 174 63.8
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 4.6e-58 228.4 174 63.8
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 4.6e-58 228.4 174 63.8
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 6.0e-58 228.0 190 61.6
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 1.3e-57 226.9 199 60.3
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 1.3e-57 226.9 167 65.3
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 1.8e-57 226.5 183 59.0
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 3.9e-57 225.3 179 60.9
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.9e-56 223.0 199 59.8
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 1.9e-56 223.0 165 66.7
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 2.5e-56 222.6 160 65.0
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 3.3e-56 222.2 141 76.6
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 9.6e-56 220.7 157 63.1
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 4.8e-55 218.4 174 60.3
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 9.0e-54 214.2 189 58.2
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.7e-50 202.6 136 73.5
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 8.2e-47 191.0 193 49.2
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 1.2e-45 187.2 132 68.2
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.2e-45 187.2 154 59.7
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 2.0e-45 186.4 188 50.0
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 5.9e-45 184.9 141 63.1
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 7.6e-45 184.5 187 52.4
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.0e-44 181.8 152 56.6
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 8.5e-44 181.0 155 57.4
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.5e-43 178.3 153 58.2
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 6.1e-42 174.9 120 67.5
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 3.7e-39 165.6 153 58.2
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 9.1e-38 161.0 153 54.9
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.4e-32 141.4 119 58.0
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 6.9e-30 134.8 188 44.7
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 3.0e-25 119.4 81 64.2
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 4.4e-24 115.5 80 67.5
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.1e-19 100.9 105 51.4
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 6.1e-18 95.1 151 35.8
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.0e-12 77.8 47 72.3
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 2.2e-12 76.6 90 53.3
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 3.6e-10 69.3 49 65.3
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.2e-07 60.1 41 65.9
Sopen11g002570 Solanum pennellii HOM05D000011 ORTHO05D000018 4.1e-06 55.8 34 73.5


User provided reference genes

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