Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 3.4e-172 608.2 305 100.0
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 8.2e-150 533.9 302 86.4
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 1.3e-147 526.6 305 83.3
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 3.6e-145 518.5 314 81.5
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 2.5e-138 495.7 305 77.4
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 3.2e-138 495.4 304 79.9
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 7.2e-138 494.2 305 79.0
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 7.2e-138 494.2 305 79.0
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.2e-135 486.9 305 78.4
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 4.4e-135 485.0 305 75.7
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 7.5e-135 484.2 306 75.8
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 2.8e-134 482.3 305 74.1
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 1.4e-133 479.9 305 73.8
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 4.1e-133 478.4 305 73.4
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 4.1e-133 478.4 305 74.1
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 5.3e-133 478.0 305 74.1
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 7.0e-133 477.6 299 78.9
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 1.2e-132 476.9 306 75.8
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 2.0e-132 476.1 306 75.5
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 2.0e-132 476.1 305 73.8
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 4.5e-132 474.9 305 74.8
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 7.7e-132 474.2 306 74.8
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 7.7e-132 474.2 305 74.4
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 1.3e-131 473.4 305 75.4
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 2.9e-131 472.2 306 74.8
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 6.5e-131 471.1 306 74.5
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 6.5e-131 471.1 305 74.8
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 8.5e-131 470.7 305 73.4
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 1.9e-130 469.5 305 74.4
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 1.9e-130 469.5 305 73.4
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 1.9e-130 469.5 305 73.1
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 5.5e-130 468.0 305 71.8
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 7.2e-130 467.6 305 73.4
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 7.2e-130 467.6 304 74.0
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 7.2e-130 467.6 305 73.1
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 9.4e-130 467.2 309 73.5
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 1.2e-129 466.8 305 73.4
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 2.1e-129 466.1 304 73.7
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 2.7e-129 465.7 305 73.4
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 4.7e-129 464.9 305 73.4
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 4.7e-129 464.9 305 73.4
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 8.0e-129 464.2 304 74.0
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 8.0e-129 464.2 305 72.5
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 1.0e-128 463.8 304 73.7
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 1.4e-128 463.4 305 73.1
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 1.8e-128 463.0 305 72.8
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 4.0e-128 461.8 305 71.8
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 4.0e-128 461.8 306 73.9
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 6.8e-128 461.1 305 74.1
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 1.2e-127 460.3 302 74.2
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 1.2e-127 460.3 305 73.1
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 1.2e-127 460.3 306 71.9
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.5e-127 459.9 305 71.1
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.5e-127 459.9 305 71.1
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 2.6e-127 459.1 305 71.8
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 2.6e-127 459.1 305 72.5
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.4e-127 458.8 306 73.2
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 3.4e-127 458.8 306 72.9
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 4.4e-127 458.4 305 72.8
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 5.7e-127 458.0 306 72.5
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 5.7e-127 458.0 305 72.5
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 9.8e-127 457.2 306 72.2
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.7e-126 456.4 306 71.6
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 2.2e-126 456.1 306 72.9
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 3.7e-126 455.3 305 71.8
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 1.1e-125 453.8 306 72.9
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.1e-125 453.8 304 71.1
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 1.4e-125 453.4 306 71.6
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 1.8e-125 453.0 305 72.8
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 2.7e-124 449.1 305 68.2
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 4.5e-124 448.4 305 70.8
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 5.9e-124 448.0 305 71.1
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 5.9e-124 448.0 305 70.2
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 7.7e-124 447.6 305 71.1
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 1.0e-123 447.2 305 71.8
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 1.0e-123 447.2 305 70.5
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 2.2e-123 446.0 305 68.5
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 2.9e-123 445.7 306 71.6
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 2.9e-123 445.7 323 68.1
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 1.9e-122 443.0 306 72.5
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 1.9e-122 443.0 306 70.9
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 3.2e-122 442.2 308 70.8
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 4.2e-122 441.8 382 61.0
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 7.2e-122 441.0 313 69.6
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 9.5e-122 440.7 284 75.0
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 1.2e-121 440.3 306 71.2
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 2.1e-121 439.5 328 63.4
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 1.8e-120 436.4 305 68.2
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 2.3e-120 436.0 277 75.5
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 2.3e-120 436.0 321 67.6
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 2.3e-120 436.0 350 63.4
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.2e-119 433.7 308 69.8
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 1.1e-117 427.2 340 65.0
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 7.7e-116 421.0 307 65.1
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 6.6e-115 417.9 306 69.0
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 1.6e-113 413.3 298 68.1
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 3.0e-112 409.1 240 81.2
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 9.2e-109 397.5 261 74.3
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 7.8e-108 394.4 245 77.6
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 6.6e-107 391.3 305 63.9
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.5e-106 390.2 285 67.7
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 2.3e-104 382.9 249 73.5
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 3.4e-103 379.0 306 61.8
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 2.2e-102 376.3 304 63.5
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 4.0e-96 355.5 241 68.5
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 7.8e-92 341.3 303 56.8
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 7.3e-90 334.7 209 75.6
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 5.8e-87 325.1 296 55.1
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 7.6e-87 324.7 228 67.5
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 8.6e-83 311.2 294 53.7
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 1.1e-80 304.3 295 52.9
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 3.4e-71 272.7 291 48.1
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 1.9e-61 240.4 180 62.8
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.8e-59 233.8 148 77.0
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 3.3e-58 229.6 319 42.3
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 8.2e-57 224.9 146 76.7
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 1.5e-55 220.7 290 41.4
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 1.5e-55 220.7 156 65.4
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 1.9e-45 187.2 188 57.4
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 9.1e-40 168.3 149 57.0
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 6.1e-36 155.6 149 54.4
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 3.2e-29 133.3 106 61.3
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 6.1e-28 129.0 96 66.7
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 5.2e-27 125.9 100 61.0
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 6.1e-20 102.4 59 74.6
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.4e-19 101.3 67 71.6
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.8e-19 100.9 70 65.7
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.7e-17 94.4 69 63.8
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 8.2e-17 92.0 64 65.6


User provided reference genes

Program Settings