Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 6.1e-195 684.1 376 100.0
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.6e-139 500.0 394 71.8
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 4.1e-127 458.8 390 65.1
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 9.2e-127 457.6 404 63.1
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 3.5e-126 455.7 392 66.1
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 3.5e-126 455.7 390 64.6
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 7.8e-126 454.5 401 63.3
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 7.8e-126 454.5 420 63.1
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 6.6e-125 451.4 408 64.0
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.9e-124 449.9 395 64.8
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.6e-123 446.8 395 63.0
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 2.1e-123 446.4 357 69.2
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 6.2e-123 444.9 395 63.0
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.3e-122 443.0 407 60.2
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 3.1e-122 442.6 359 67.4
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 2.0e-121 439.9 409 59.7
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 4.4e-121 438.7 408 59.1
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 1.7e-120 436.8 408 59.1
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 2.2e-120 436.4 357 66.4
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 3.7e-120 435.6 408 59.1
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 4.9e-120 435.3 354 67.5
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 6.4e-120 434.9 353 64.6
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 2.4e-119 433.0 342 67.8
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 2.4e-119 433.0 407 62.2
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 2.4e-119 433.0 407 60.9
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 2.4e-119 433.0 411 58.9
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 5.4e-119 431.8 409 58.7
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 7.1e-119 431.4 402 59.7
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 7.1e-119 431.4 400 59.8
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 2.7e-118 429.5 405 60.7
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 2.7e-118 429.5 379 61.2
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 7.8e-118 427.9 404 59.2
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 1.3e-117 427.2 414 57.2
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 3.0e-117 426.0 402 60.7
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 3.9e-117 425.6 355 64.8
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 5.1e-117 425.2 392 59.7
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 1.1e-116 424.1 395 58.2
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 4.3e-116 422.2 397 58.9
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 7.3e-116 421.4 393 59.0
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 3.6e-115 419.1 352 64.5
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 4.7e-115 418.7 407 60.7
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 4.7e-115 418.7 395 58.7
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.1e-114 417.5 420 58.1
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 2.4e-114 416.4 393 60.1
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 3.1e-114 416.0 361 63.4
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 5.2e-114 415.2 398 62.3
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 6.8e-114 414.8 351 63.0
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 6.8e-114 414.8 423 57.7
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 8.9e-114 414.5 351 63.2
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.5e-113 413.7 408 58.3
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.0e-113 413.3 394 59.1
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 2.0e-113 413.3 359 64.1
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 2.0e-113 413.3 404 58.2
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.4e-113 412.5 406 58.9
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 5.8e-113 411.8 358 60.9
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 9.9e-113 411.0 415 56.4
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 2.2e-112 409.8 414 58.2
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 2.9e-112 409.5 401 57.6
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.4e-112 408.3 420 58.3
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.4e-112 408.3 420 58.3
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.4e-111 407.1 420 57.4
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 1.4e-111 407.1 427 56.2
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 1.9e-111 406.8 333 66.1
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 2.4e-111 406.4 332 65.4
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 5.4e-111 405.2 398 57.3
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 1.3e-109 400.6 422 55.5
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.3e-109 400.6 403 58.3
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 2.3e-109 399.8 398 60.1
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 6.6e-109 398.3 424 57.5
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.5e-108 397.1 430 55.3
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 4.3e-108 395.6 400 55.5
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 2.8e-107 392.9 418 54.5
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 2.8e-107 392.9 399 57.4
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 3.6e-107 392.5 335 62.4
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 8.1e-107 391.3 416 57.0
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 1.1e-106 391.0 346 63.6
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.1e-106 391.0 338 62.1
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 3.1e-106 389.4 418 54.5
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 1.2e-105 387.5 427 53.2
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 1.5e-105 387.1 406 56.2
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 2.6e-105 386.3 329 62.3
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 2.6e-105 386.3 342 61.4
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 2.2e-104 383.3 428 51.9
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 2.2e-104 383.3 469 50.3
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 2.7e-102 376.3 440 52.0
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.7e-102 376.3 425 55.1
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.0e-101 374.4 433 52.9
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 1.7e-101 373.6 425 54.6
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.3e-101 373.2 425 54.4
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 5.1e-101 372.1 337 60.5
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 1.1e-100 370.9 396 56.6
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 3.3e-100 369.4 311 63.0
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 4.3e-100 369.0 403 53.3
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 1.3e-99 367.5 311 62.7
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 4.8e-99 365.5 314 62.4
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.8e-98 363.6 398 51.8
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 3.4e-97 359.4 377 55.2
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 5.5e-95 352.1 402 52.7
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.2e-89 334.3 327 57.5
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 4.2e-87 325.9 338 53.3
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 7.4e-84 315.1 302 58.6
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 5.0e-80 302.4 319 56.4
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.1e-76 291.2 267 58.1
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 9.0e-74 281.6 314 51.3
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 9.0e-74 281.6 248 57.7
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.7e-72 277.3 325 48.6
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 2.5e-71 273.5 309 52.8
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 1.7e-67 260.8 406 39.7
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 9.1e-66 255.0 200 65.0
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.8e-61 240.7 294 49.0
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 5.2e-53 212.6 375 36.5
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 6.3e-51 205.7 132 78.0
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 2.7e-46 190.3 124 79.0
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 2.9e-40 170.2 194 52.6
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 5.0e-32 142.9 88 76.1
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 7.0e-26 122.5 304 30.3
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 2.3e-24 117.5 404 26.0
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 5.4e-18 96.3 67 73.1
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 1.6e-14 84.7 70 70.0
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 3.1e-13 80.5 307 27.0
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 2.4e-10 70.9 47 68.1
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 7.1e-10 69.3 46 69.6
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 9.2e-10 68.9 46 69.6


User provided reference genes

Program Settings