Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 1.4e-249 865.9 453 100.0
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 2.5e-142 509.6 445 58.9
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 1.8e-140 503.4 460 60.2
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 2.6e-131 473.0 395 60.5
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.8e-124 450.3 459 54.7
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.6e-123 446.4 458 55.7
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 1.4e-121 440.7 455 53.2
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 1.4e-121 440.7 450 55.6
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 1.4e-121 440.7 460 54.3
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 3.5e-120 436.0 449 55.0
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 5.9e-120 435.3 460 53.3
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 3.2e-118 429.5 458 55.0
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 5.5e-118 428.7 463 52.9
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 7.2e-118 428.3 458 54.6
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 8.0e-117 424.9 421 55.6
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 1.0e-116 424.5 466 52.4
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 1.4e-116 424.1 439 55.4
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 5.2e-116 422.2 394 55.6
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 5.7e-115 418.7 425 55.1
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.7e-114 417.2 465 51.6
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 2.2e-114 416.8 465 52.3
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 2.8e-114 416.4 420 54.3
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 2.8e-114 416.4 466 50.4
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 2.8e-114 416.4 456 51.5
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 8.2e-114 414.8 459 52.9
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 1.8e-113 413.7 459 52.9
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 2.4e-113 413.3 402 57.2
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 4.1e-113 412.5 423 53.4
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 5.3e-113 412.1 457 52.3
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.2e-112 411.0 420 53.3
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 3.5e-112 409.5 463 51.0
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 3.5e-112 409.5 464 51.1
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 4.5e-112 409.1 461 51.4
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 5.9e-112 408.7 463 51.2
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 5.9e-112 408.7 464 49.6
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.2e-111 406.8 460 50.9
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 8.5e-111 404.8 463 51.0
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 1.1e-110 404.4 459 49.7
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 2.5e-110 403.3 401 55.1
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 2.5e-110 403.3 415 54.5
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.2e-110 402.9 458 50.2
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 3.2e-110 402.9 460 52.2
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 4.2e-110 402.5 398 55.3
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 5.5e-110 402.1 459 51.0
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 7.2e-110 401.7 461 49.0
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 9.4e-110 401.4 423 53.4
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.2e-109 401.0 423 53.4
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.6e-109 400.6 421 53.0
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 8.0e-109 398.3 457 50.1
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.4e-108 397.5 392 54.6
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 1.2e-107 394.4 425 52.5
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 1.2e-107 394.4 394 54.6
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 2.0e-107 393.7 477 49.7
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 4.4e-107 392.5 416 51.4
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 5.7e-107 392.1 410 53.9
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 1.3e-106 391.0 423 52.7
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 2.2e-106 390.2 398 52.8
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 6.3e-106 388.7 397 53.1
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 1.4e-105 387.5 398 52.5
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 3.1e-105 386.3 398 55.3
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 3.1e-105 386.3 394 54.6
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 3.1e-105 386.3 365 58.1
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 4.1e-105 386.0 457 47.3
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 7.0e-105 385.2 457 47.3
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 1.2e-104 384.4 457 46.8
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 2.0e-104 383.6 457 46.8
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 2.0e-104 383.6 457 46.8
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.0e-104 383.6 424 48.8
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 2.7e-104 383.3 424 47.9
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 4.5e-104 382.5 457 46.6
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 5.9e-104 382.1 386 56.2
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 2.9e-103 379.8 415 48.7
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 3.8e-103 379.4 422 49.3
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 5.0e-103 379.0 457 47.3
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 1.5e-102 377.5 480 47.7
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 4.2e-102 375.9 418 48.6
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 5.5e-102 375.6 396 51.8
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 3.0e-100 369.8 396 50.0
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 7.5e-99 365.2 396 50.3
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.7e-98 364.0 395 49.4
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.2e-96 357.8 467 45.0
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 1.7e-95 354.0 431 46.9
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 5.0e-95 352.4 435 46.4
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 1.9e-94 350.5 435 45.3
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 2.5e-94 350.1 385 48.1
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 3.3e-94 349.7 464 43.8
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 4.3e-94 349.4 441 45.4
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 9.5e-94 348.2 394 49.7
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 1.6e-93 347.4 431 46.9
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 1.0e-92 344.7 352 57.1
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 1.4e-92 344.4 431 46.4
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 1.4e-92 344.4 431 46.4
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 1.4e-92 344.4 332 55.4
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 3.1e-92 343.2 391 48.1
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 8.9e-92 341.7 383 50.1
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 3.4e-91 339.7 395 47.3
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.7e-90 337.4 395 50.4
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 6.4e-90 335.5 400 46.5
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.4e-89 333.6 461 46.2
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 4.1e-89 332.8 461 46.2
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 1.1e-84 318.2 349 51.3
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 4.9e-82 309.3 393 45.3
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 2.7e-80 303.5 417 45.3
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.7e-79 300.8 350 48.0
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.5e-78 297.0 370 48.4
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 1.6e-77 294.3 413 45.8
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 2.9e-74 283.5 338 50.0
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 8.1e-69 265.4 340 48.8
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 2.9e-66 256.9 358 47.2
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 4.9e-66 256.1 406 40.4
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 1.2e-61 241.5 256 52.3
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 5.8e-59 232.6 395 39.7
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 4.2e-57 226.5 406 41.6
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 1.5e-54 218.0 232 52.6
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 1.7e-50 204.5 198 56.1
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 3.3e-46 190.3 248 46.4
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.3e-45 188.3 208 46.6
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 2.0e-43 181.0 394 34.8
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.9e-41 174.5 401 33.9
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 8.7e-39 165.6 395 31.6
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 2.4e-36 157.5 409 33.7
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 4.2e-25 120.2 416 28.6
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 5.5e-17 93.2 398 25.6
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 8.8e-15 85.9 420 25.5
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.5e-14 85.1 193 33.2
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 2.0e-14 84.7 179 35.2
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 2.4e-12 77.8 166 34.3
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 3.1e-12 77.4 109 45.9
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.5e-09 68.6 117 34.2
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 9.4e-09 65.9 72 47.2
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 1.4e-07 62.0 77 42.9


User provided reference genes

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