Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 9.0e-105 383.6 201 100.0
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 2.2e-74 282.7 204 72.1
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 1.4e-68 263.5 176 72.7
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 3.4e-67 258.8 201 66.7
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 1.3e-66 256.9 177 73.4
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 3.7e-66 255.4 208 65.4
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 8.3e-66 254.2 199 66.3
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 3.1e-65 252.3 189 64.6
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 1.3e-63 246.9 186 68.3
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 2.9e-63 245.7 188 67.0
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 6.6e-63 244.6 178 68.0
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 8.6e-63 244.2 196 64.8
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 8.6e-63 244.2 186 67.7
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 8.6e-63 244.2 201 65.2
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 2.5e-62 242.7 193 64.8
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 3.3e-62 242.3 182 65.9
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 4.2e-62 241.9 183 68.3
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 5.5e-62 241.5 195 65.1
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 1.6e-61 240.0 184 63.0
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 2.1e-61 239.6 185 64.9
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 4.7e-61 238.4 186 66.1
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 8.0e-61 237.7 197 59.9
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 2.3e-60 236.1 182 63.2
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 3.0e-60 235.7 188 60.6
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 4.0e-60 235.3 186 62.9
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 2.6e-59 232.6 189 60.8
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 7.5e-59 231.1 190 59.5
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 2.8e-58 229.2 178 62.4
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 3.7e-58 228.8 195 57.4
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 3.7e-58 228.8 187 61.5
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 1.4e-57 226.9 158 67.1
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 1.8e-57 226.5 157 68.2
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 4.1e-57 225.3 159 70.4
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 7.0e-57 224.6 197 56.9
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 9.2e-57 224.2 194 57.7
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 2.0e-56 223.0 195 57.9
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 3.5e-56 222.2 185 61.6
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 4.5e-56 221.9 195 59.0
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 5.9e-56 221.5 185 60.0
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 5.9e-56 221.5 185 60.0
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 5.9e-56 221.5 187 59.9
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 7.8e-56 221.1 184 60.3
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 1.0e-55 220.7 185 60.0
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 1.3e-55 220.3 182 62.1
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 1.7e-55 219.9 187 59.9
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 2.3e-55 219.5 150 69.3
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 2.3e-55 219.5 185 59.5
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 2.9e-55 219.2 187 58.3
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 5.0e-55 218.4 158 67.1
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 6.6e-55 218.0 195 56.9
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 8.6e-55 217.6 183 60.7
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 1.1e-54 217.2 195 56.9
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 1.1e-54 217.2 195 55.9
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 3.3e-54 215.7 183 59.6
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 4.3e-54 215.3 188 59.6
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 4.3e-54 215.3 189 59.8
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 1.6e-53 213.4 195 56.4
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 3.6e-53 212.2 185 57.3
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 8.0e-53 211.1 156 66.0
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 8.0e-53 211.1 189 58.7
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 5.2e-52 208.4 155 66.5
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 1.5e-51 206.8 195 58.5
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 2.0e-51 206.5 189 57.1
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 7.5e-51 204.5 197 55.3
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 9.8e-51 204.1 155 62.6
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 2.9e-50 202.6 190 56.3
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 2.9e-50 202.6 188 58.0
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 6.4e-50 201.4 197 55.3
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 1.1e-49 200.7 189 52.4
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 1.4e-49 200.3 189 54.0
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 1.9e-49 199.9 192 55.2
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 1.9e-49 199.9 192 55.2
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 1.9e-49 199.9 192 55.2
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 5.4e-49 198.4 170 56.5
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 5.4e-49 198.4 204 54.9
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 9.2e-49 197.6 193 54.9
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 1.2e-48 197.2 189 54.5
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 1.6e-48 196.8 167 59.9
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 1.6e-48 196.8 166 60.2
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 2.0e-48 196.4 150 61.3
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 3.5e-48 195.7 171 60.2
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 3.5e-48 195.7 144 62.5
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 4.6e-48 195.3 188 54.8
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 4.6e-48 195.3 193 54.4
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 7.8e-48 194.5 149 59.7
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 7.8e-48 194.5 177 53.7
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 1.0e-47 194.1 188 55.3
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 1.0e-47 194.1 167 58.7
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 1.3e-47 193.7 187 54.5
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 1.3e-47 193.7 141 62.4
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 1.3e-47 193.7 141 62.4
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 2.5e-46 189.5 135 63.7
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 2.5e-46 189.5 295 40.3
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 4.3e-46 188.7 183 57.4
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 5.6e-46 188.3 143 62.9
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 8.3e-42 174.5 154 51.3
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 1.3e-39 167.2 127 63.0
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 3.6e-37 159.1 127 63.8
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 3.1e-36 156.0 115 59.1
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 6.8e-36 154.8 147 51.0
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 4.4e-35 152.1 99 75.8
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 4.4e-35 152.1 135 51.1
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 3.7e-34 149.1 91 76.9
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 2.4e-33 146.4 122 57.4
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 5.4e-33 145.2 101 67.3
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 3.5e-32 142.5 121 60.3
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 1.9e-25 120.2 131 48.9
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 3.5e-24 115.9 101 53.5
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 4.9e-18 95.5 112 48.2
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 1.1e-17 94.4 128 41.4
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 3.0e-15 86.3 85 48.2
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 4.0e-12 75.9 127 35.4
Cre13.g604300 Chlamydomonas reinhardtii HOM05D007042 ORTHO05D008441 5.4e-09 65.5 127 27.6
Potri.014G193150 Populus trichocarpa HOM05D007042 ORTHO05D008441 8.7e-07 58.2 64 48.4


User provided reference genes

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