Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 5.1e-246 854.0 431 100.0
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 9.4e-176 620.5 426 73.9
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 2.6e-165 585.9 404 74.3
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 8.6e-161 570.9 431 68.2
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 3.3e-152 542.3 429 64.6
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 9.5e-152 540.8 426 65.0
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 3.1e-150 535.8 412 65.5
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.2e-149 533.9 430 63.5
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 2.9e-148 529.3 430 63.3
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 3.7e-148 528.9 414 64.3
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 1.1e-147 527.3 414 63.8
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 7.0e-147 524.6 451 60.1
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 3.5e-146 522.3 448 60.9
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 3.5e-146 522.3 429 61.5
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 8.0e-143 511.1 414 63.5
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 3.1e-142 509.2 423 62.2
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 4.0e-142 508.8 415 63.4
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 1.5e-141 506.9 430 60.9
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.3e-140 503.8 432 61.1
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 5.4e-139 498.4 428 58.9
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 5.4e-139 498.4 425 60.0
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 1.7e-137 493.4 433 58.2
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 5.1e-137 491.9 439 59.9
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 8.6e-137 491.1 435 60.0
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 1.1e-136 490.7 437 59.0
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 1.1e-136 490.7 426 59.4
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 1.5e-136 490.3 430 60.2
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.5e-136 490.3 427 59.0
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 4.3e-136 488.8 428 57.9
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 5.6e-136 488.4 425 59.3
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 2.8e-135 486.1 435 59.8
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 4.7e-135 485.3 431 58.7
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 1.4e-134 483.8 426 57.7
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 1.8e-134 483.4 427 58.3
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 2.6e-133 479.6 432 57.6
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 3.4e-133 479.2 424 58.0
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 2.2e-132 476.5 491 51.7
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 6.4e-132 474.9 422 58.8
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 1.1e-131 474.2 414 57.7
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 1.9e-131 473.4 425 58.4
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 3.2e-131 472.6 422 58.3
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 9.2e-131 471.1 426 58.2
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 4.6e-130 468.8 426 57.5
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.0e-129 467.6 427 57.4
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.3e-129 467.2 428 56.5
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 3.0e-129 466.1 427 57.8
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.9e-128 463.4 417 56.1
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 3.3e-128 462.6 429 56.9
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 9.5e-128 461.1 426 57.0
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 3.6e-127 459.1 427 57.1
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 1.4e-126 457.2 431 55.2
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.4e-126 456.4 427 55.3
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 3.1e-126 456.1 415 56.1
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.0e-126 455.7 427 55.3
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 4.0e-126 455.7 428 56.3
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 1.5e-125 453.8 432 53.9
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 1.5e-125 453.8 421 56.3
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 2.0e-125 453.4 432 53.9
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 3.4e-125 452.6 429 56.9
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 3.4e-125 452.6 364 62.9
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 5.8e-125 451.8 432 55.1
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 7.6e-125 451.4 434 53.2
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 7.6e-125 451.4 429 54.5
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 9.9e-125 451.1 434 53.2
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 2.2e-124 449.9 474 53.6
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 6.4e-124 448.4 416 54.8
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 8.4e-124 448.0 432 53.7
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 1.1e-123 447.6 426 55.2
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 2.4e-123 446.4 427 55.7
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 3.2e-123 446.0 426 54.7
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 9.2e-123 444.5 429 55.0
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 2.1e-122 443.4 434 54.4
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 2.7e-122 443.0 439 52.6
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 4.6e-122 442.2 445 55.1
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 1.3e-121 440.7 426 54.9
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 1.7e-121 440.3 417 55.9
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 3.0e-121 439.5 428 56.5
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 5.1e-121 438.7 432 53.0
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 5.1e-121 438.7 429 53.8
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 1.3e-119 434.1 307 68.1
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 4.8e-119 432.2 421 53.9
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 6.2e-119 431.8 414 54.1
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 1.8e-118 430.3 430 53.5
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 6.9e-118 428.3 421 55.6
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 5.8e-117 425.2 374 59.1
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 3.8e-116 422.5 426 53.8
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 1.1e-115 421.0 439 54.0
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 1.0e-113 414.5 432 53.0
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 5.1e-113 412.1 416 53.8
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 3.6e-111 406.0 419 50.8
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 1.4e-110 404.1 412 51.5
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.2e-109 401.0 429 51.5
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 2.0e-109 400.2 290 66.2
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 2.9e-100 369.8 359 56.5
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 3.2e-99 366.3 431 45.9
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 9.3e-99 364.8 440 48.4
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 1.0e-97 361.3 421 46.8
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 5.7e-88 328.9 345 51.0
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 4.8e-87 325.9 417 43.2
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 6.1e-82 308.9 321 52.6
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 2.8e-79 300.1 218 70.2
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 3.3e-72 276.6 433 42.0
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 3.0e-57 226.9 259 47.9
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.7e-55 221.1 281 44.5
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 6.5e-52 209.1 227 49.3
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 4.2e-51 206.5 140 71.4
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 4.0e-49 199.9 400 31.5
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 2.0e-48 197.6 143 62.9
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 2.6e-48 197.2 350 34.3
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 5.7e-48 196.1 390 37.9
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 2.2e-47 194.1 136 63.2
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 2.0e-45 187.6 283 36.4
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 2.3e-44 184.1 301 35.5
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.4e-38 164.9 137 52.6
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 7.0e-38 162.5 160 56.2
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 2.5e-35 154.1 136 55.1
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 2.6e-32 144.1 165 47.3
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 3.2e-30 137.1 298 30.2
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 6.8e-17 92.8 95 50.5
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 2.2e-15 87.8 172 36.6
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 1.9e-14 84.7 112 44.6
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 1.2e-10 72.0 278 20.1
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 6.2e-10 69.7 180 27.8


User provided reference genes

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