Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00693 Erythranthe guttata HOM05D007537 ORTHO05D009602 1.7e-160 569.3 295 100.0
MSTRG.27338 Avicennia marina HOM05D007537 ORTHO05D009602 9.2e-90 334.3 317 61.5
Nitab4.5_0000797g0160 Nicotiana tabacum HOM05D007537 ORTHO05D009602 5.6e-79 298.5 312 55.4
Cc02_g06360 Coffea canephora HOM05D007537 ORTHO05D009602 1.2e-78 297.4 307 54.1
SGA_v2.0_scaffold44G16701 Striga asiatica HOM05D007537 ORTHO05D009602 2.4e-77 293.1 299 55.5
CSS0047961 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 5.3e-77 292.0 315 53.7
Nitab4.5_0008231g0020 Nicotiana tabacum HOM05D007537 ORTHO05D009602 1.2e-76 290.8 314 53.5
Actinidia13942 Actinidia chinensis HOM05D007537 ORTHO05D009602 2.0e-76 290.0 312 53.2
CSS0001440 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 2.6e-76 289.7 315 53.7
Duzib114G0965 Durio zibethinus HOM05D007537 ORTHO05D009602 9.9e-76 287.7 310 53.5
Peaxi162Scf00284g01051 Petunia axillaris HOM05D007537 ORTHO05D009602 2.9e-75 286.2 318 52.5
vmacro10037 Vaccinium macrocarpon HOM05D007537 ORTHO05D009602 2.9e-75 286.2 311 56.6
Solyc06g051360.3 Solanum lycopersicum HOM05D007537 ORTHO05D009602 8.4e-75 284.6 317 52.1
Sopen06g017350 Solanum pennellii HOM05D007537 ORTHO05D009602 1.4e-74 283.9 316 51.9
PGSC0003DMG400024236 Solanum tuberosum HOM05D007537 ORTHO05D009602 1.9e-74 283.5 322 53.1
CSS0034530 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 1.2e-73 280.8 311 53.1
Rhsim09G0177700 Rhododendron simsii HOM05D007537 ORTHO05D009602 5.1e-72 275.4 312 52.9
Cfa001307 Carpinus fangiana HOM05D007537 ORTHO05D009602 6.6e-72 275.0 312 51.9
Prupe.2G251400 Prunus persica HOM05D007537 ORTHO05D009602 4.3e-71 272.3 316 55.1
Thecc.10G014900 Theobroma cacao HOM05D007537 ORTHO05D009602 4.3e-71 272.3 308 51.3
COL.COLO4_25746 Corchorus olitorius HOM05D007537 ORTHO05D009602 5.6e-71 271.9 309 51.1
Lsat_1_v5_gn_8_12620 Lactuca sativa HOM05D007537 ORTHO05D009602 3.6e-70 269.2 296 52.4
DCAR_011821 Daucus carota HOM05D007537 ORTHO05D009602 4.0e-69 265.8 304 51.6
TAR633G2636 Trochodendron aralioides HOM05D007537 ORTHO05D009602 6.9e-69 265.0 309 51.1
HanXRQChr08g0221761 Helianthus annuus HOM05D007537 ORTHO05D009602 6.4e-67 258.5 309 51.1
Nn2g10869 Nelumbo nucifera HOM05D007537 ORTHO05D009602 6.4e-67 258.5 331 46.2
LjContig00357g0012610 Lotus japonicus HOM05D007537 ORTHO05D009602 8.4e-67 258.1 317 51.4
arahy.Tifrunner.gnm1.ann1.EU49LP Arachis hypogaea HOM05D007537 ORTHO05D009602 2.4e-66 256.5 309 53.4
Manes.07G130900 Manihot esculenta HOM05D007537 ORTHO05D009602 4.2e-66 255.8 317 49.8
Glyma.02G257900 Glycine max HOM05D007537 ORTHO05D009602 7.1e-66 255.0 299 49.8
CiPaw.01G299800 Carya illinoinensis HOM05D007537 ORTHO05D009602 1.2e-65 254.2 321 48.0
Gorai.013G017500 Gossypium raimondii HOM05D007537 ORTHO05D009602 2.1e-65 253.4 314 51.9
Sabra08G0051400 Salix brachista HOM05D007537 ORTHO05D009602 4.6e-65 252.3 315 48.3
Ciclev10031789m.g Citrus clementina HOM05D007537 ORTHO05D009602 7.9e-65 251.5 326 47.5
Haze_17238 Corylus avellana HOM05D007537 ORTHO05D009602 1.3e-64 250.8 313 49.5
Ca_05971_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 1.8e-64 250.4 280 52.1
Ca_05972_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 1.8e-64 250.4 280 52.1
ClCG07G004310 Citrullus lanatus HOM05D007537 ORTHO05D009602 2.5e-63 246.5 301 46.8
arahy.Tifrunner.gnm1.ann1.QLS93X Arachis hypogaea HOM05D007537 ORTHO05D009602 1.3e-62 244.2 319 49.2
ECA233G1171 Erigeron canadensis HOM05D007537 ORTHO05D009602 1.3e-62 244.2 319 46.4
Medtr5g082850 Medicago truncatula HOM05D007537 ORTHO05D009602 2.8e-62 243.0 311 48.6
Psat2g031640 Pisum sativum HOM05D007537 ORTHO05D009602 4.8e-62 242.3 307 49.8
Aqoxy2G00863 Aquilegia oxysepala HOM05D007537 ORTHO05D009602 6.2e-62 241.9 308 46.4
THA.LOC104823184 Tarenaya hassleriana HOM05D007537 ORTHO05D009602 8.1e-62 241.5 293 49.5
Hund13875 Selenicereus undatus HOM05D007537 ORTHO05D009602 1.1e-61 241.1 323 46.7
Gohir.D13G016000 Gossypium hirsutum HOM05D007537 ORTHO05D009602 1.4e-61 240.7 314 50.3
RcHm_v2.0_Chr1g0370441 Rosa chinensis HOM05D007537 ORTHO05D009602 5.3e-61 238.8 318 44.0
VMungo0647G0018 Vigna mungo HOM05D007537 ORTHO05D009602 6.9e-61 238.4 297 49.2
Sed0013636 Sechium edule HOM05D007537 ORTHO05D009602 3.4e-60 236.1 304 48.4
TPR.G38413 Trifolium pratense HOM05D007537 ORTHO05D009602 7.6e-60 235.0 315 45.4
FAN06G1236 Fragaria x ananassa HOM05D007537 ORTHO05D009602 4.9e-59 232.3 315 43.5
AUR62022900 Chenopodium quinoa HOM05D007537 ORTHO05D009602 6.4e-59 231.9 339 45.4
PSO384G1417 Papaver somniferum HOM05D007537 ORTHO05D009602 6.4e-59 231.9 349 43.0
Potri.008G069800 Populus trichocarpa HOM05D007537 ORTHO05D009602 6.4e-59 231.9 317 45.7
FAN01G2979 Fragaria x ananassa HOM05D007537 ORTHO05D009602 8.4e-59 231.5 315 43.5
FAN10G0956 Fragaria x ananassa HOM05D007537 ORTHO05D009602 8.4e-59 231.5 317 42.6
FAN03G1922 Fragaria x ananassa HOM05D007537 ORTHO05D009602 1.9e-58 230.3 317 43.2
FvH4_7g24610 Fragaria vesca HOM05D007537 ORTHO05D009602 2.5e-58 229.9 315 43.5
PGR044G1397 Punica granatum HOM05D007537 ORTHO05D009602 2.7e-57 226.5 326 42.9
Phvul.008G223100 Phaseolus vulgaris HOM05D007537 ORTHO05D009602 6.0e-57 225.3 303 45.9
GSVIVG01032801001 Vitis vinifera HOM05D007537 ORTHO05D009602 1.8e-56 223.8 250 52.4
Thhalv10020993m.g Eutrema salsugineum HOM05D007537 ORTHO05D009602 2.3e-56 223.4 296 44.3
MBI03_g40958_MAGBIO Magnolia biondii HOM05D007537 ORTHO05D009602 8.7e-56 221.5 318 44.3
Carub.0003s1045 Capsella rubella HOM05D007537 ORTHO05D009602 3.3e-55 219.5 309 43.0
BolC1t05333H Brassica oleracea HOM05D007537 ORTHO05D009602 4.3e-55 219.2 296 45.3
CARHR085730 Cardamine hirsuta HOM05D007537 ORTHO05D009602 4.3e-55 219.2 309 43.0
BcaB04g21148 Brassica carinata HOM05D007537 ORTHO05D009602 7.4e-55 218.4 296 45.3
Lalb_Chr04g0250531 Lupinus albus HOM05D007537 ORTHO05D009602 1.6e-54 217.2 302 45.4
Ah.10g036610 Amaranthus hybridus HOM05D007537 ORTHO05D009602 2.1e-54 216.9 318 46.5
AUR62012265 Chenopodium quinoa HOM05D007537 ORTHO05D009602 2.1e-54 216.9 343 43.1
BcaC09g48157 Brassica carinata HOM05D007537 ORTHO05D009602 3.7e-54 216.1 296 44.9
Sp3g09450 Schrenkiella parvula HOM05D007537 ORTHO05D009602 1.1e-53 214.5 300 43.7
Aa31LG3G4310 Aethionema arabicum HOM05D007537 ORTHO05D009602 1.0e-51 208.0 306 41.5
AL3G22670 Arabidopsis lyrata HOM05D007537 ORTHO05D009602 2.2e-51 206.8 320 42.2
Eucgr.J00197 Eucalyptus grandis HOM05D007537 ORTHO05D009602 1.9e-50 203.8 310 42.6
AT3G11150 Arabidopsis thaliana HOM05D007537 ORTHO05D009602 4.2e-50 202.6 319 40.8
Dinv21742 Davidia involucrata HOM05D007537 ORTHO05D009602 3.5e-49 199.5 195 56.9
BraA01t04198Z Brassica rapa HOM05D007537 ORTHO05D009602 4.8e-46 189.1 296 40.5
Gohir.A13G014800 Gossypium hirsutum HOM05D007537 ORTHO05D009602 2.0e-44 183.7 219 54.3
Sc10g0002440 Simmondsia chinensis HOM05D007537 ORTHO05D009602 1.2e-41 174.5 336 39.3
EL10Ac2g04847 Beta vulgaris HOM05D007537 ORTHO05D009602 6.1e-41 172.2 307 40.1
CsaV3_5G010250 Cucumis sativus L. HOM05D007537 ORTHO05D009602 2.2e-38 163.7 205 46.8
MELO3C026792.2 Cucumis melo HOM05D007537 ORTHO05D009602 3.1e-37 159.8 203 45.8
Atru.chr12.52 Acer truncatum HOM05D007537 ORTHO05D009602 3.9e-32 142.9 316 34.5
Oeu004692.1 Olea europaea HOM05D007537 ORTHO05D009602 6.7e-32 142.1 141 61.7
BcaB04g21146 Brassica carinata HOM05D007537 ORTHO05D009602 9.7e-31 138.3 193 44.6
HPP92_007582 Vanilla planifolia HOM05D007537 ORTHO05D009602 3.1e-29 133.3 318 35.8
CSS0044280 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 2.6e-28 130.2 118 59.3
Os01g0830500 Oryza sativa ssp. japonica HOM05D007537 ORTHO05D009602 8.5e-27 125.2 311 35.0
ATR0681G199 Amborella trichopoda HOM05D007537 ORTHO05D009602 3.6e-25 119.8 327 30.6
MD01G1154400 Malus domestica HOM05D007537 ORTHO05D009602 9.7e-23 111.7 135 48.9
Oeu004690.1 Olea europaea HOM05D007537 ORTHO05D009602 5.9e-20 102.4 105 56.2
Glyma.14G058602 Glycine max HOM05D007537 ORTHO05D009602 4.0e-16 89.7 124 46.0
SEGI_01266 Sequoiadendron giganteum HOM05D007537 ORTHO05D009602 7.0e-13 79.0 304 24.7
SEGI_28444 Sequoiadendron giganteum HOM05D007537 ORTHO05D008256 1.6e-12 77.8 321 25.5
SEGI_29994 Sequoiadendron giganteum HOM05D007537 ORTHO05D008256 1.6e-12 77.8 321 25.5
SEGI_41305 Sequoiadendron giganteum HOM05D007537 ORTHO05D009602 5.9e-12 75.9 304 24.3
CAN.G1143.6 Capsicum annuum HOM05D006831 ORTHO05D008256 3.7e-06 56.6 81 35.8
Ciclev10006410m.g Citrus clementina HOM05D000206 ORTHO05D002863 4.8e-06 56.2 233 25.8
DCAR_010021 Daucus carota HOM05D000018 ORTHO05D001766 6.3e-06 55.8 221 23.1


User provided reference genes

Program Settings