Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 8.2e-168 593.6 285 100.0
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 4.4e-129 464.9 285 78.2
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.8e-127 459.5 285 77.2
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.9e-125 452.2 307 72.6
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 2.0e-121 439.5 281 75.8
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 6.1e-115 417.9 273 73.6
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 8.9e-114 414.1 278 68.3
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 1.2e-113 413.7 271 67.9
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 4.5e-110 401.7 278 66.2
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 5.0e-109 398.3 266 69.5
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 1.1e-108 397.1 285 65.3
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.9e-108 396.4 254 70.1
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.8e-107 392.5 277 66.1
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 6.1e-107 391.3 271 66.1
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 4.0e-106 388.7 257 69.6
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 4.4e-105 385.2 256 68.8
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 1.9e-103 379.8 286 63.6
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.2e-102 377.1 277 63.5
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.6e-102 376.7 281 60.9
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 2.7e-102 375.9 280 63.2
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.3e-101 373.6 270 63.3
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 5.0e-101 371.7 303 61.1
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 6.6e-101 371.3 265 63.8
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.9e-100 369.8 270 63.0
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 3.3e-100 369.0 274 64.2
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.2e-99 367.1 270 60.0
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 4.7e-99 365.2 268 61.2
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 6.2e-99 364.8 266 62.4
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 6.2e-99 364.8 268 66.0
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 1.1e-98 364.0 267 63.7
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 1.1e-98 364.0 267 64.4
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 3.1e-98 362.5 280 59.3
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 3.1e-98 362.5 252 63.5
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 6.8e-98 361.3 252 63.1
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 8.9e-98 360.9 252 64.7
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.5e-97 360.1 257 63.0
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.5e-97 360.1 280 58.6
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 7.5e-97 357.8 252 61.5
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 7.5e-97 357.8 275 60.7
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.3e-96 357.1 340 52.9
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 2.2e-96 356.3 280 59.3
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 2.2e-96 356.3 273 61.2
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 3.7e-96 355.5 278 60.1
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 4.9e-96 355.1 312 56.7
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 4.9e-96 355.1 274 59.5
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 1.9e-95 353.2 273 59.0
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 1.9e-95 353.2 266 60.9
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 2.4e-95 352.8 312 56.4
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.4e-95 352.8 278 60.8
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.2e-95 352.4 287 59.9
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 2.1e-94 349.7 258 60.9
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.9e-92 343.2 275 61.5
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 4.3e-92 342.0 256 60.5
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 9.5e-92 340.9 256 59.4
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 1.6e-91 340.1 343 52.2
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 3.6e-91 339.0 273 57.1
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 6.2e-91 338.2 272 57.4
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 6.2e-91 338.2 257 60.7
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 8.1e-91 337.8 256 60.2
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 1.8e-90 336.7 227 70.0
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 3.4e-89 332.4 243 62.6
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 5.8e-89 331.6 275 57.1
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 9.9e-89 330.9 315 50.5
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 2.2e-88 329.7 270 57.0
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 2.4e-87 326.2 340 47.1
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 3.2e-87 325.9 272 55.1
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 5.4e-87 325.1 271 56.8
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 1.3e-85 320.5 277 56.3
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.7e-85 320.1 271 58.7
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 2.3e-85 319.7 278 54.7
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 5.1e-85 318.5 274 55.1
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 8.6e-85 317.8 251 58.6
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 8.6e-85 317.8 278 57.9
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.1e-84 317.4 268 54.1
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 4.3e-84 315.5 368 43.8
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 9.5e-84 314.3 263 56.3
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 2.1e-83 313.2 252 56.3
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 5.8e-81 305.1 244 55.3
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 9.9e-81 304.3 207 67.6
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 6.4e-80 301.6 262 56.5
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 3.2e-79 299.3 249 56.6
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 2.3e-77 293.1 202 66.3
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 5.1e-77 292.0 284 51.8
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 1.9e-76 290.0 235 55.3
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 5.6e-76 288.5 206 64.1
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.2e-75 287.3 345 45.5
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.6e-75 287.0 245 55.1
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 3.6e-75 285.8 202 64.9
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 6.2e-75 285.0 293 48.5
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 2.4e-74 283.1 219 59.4
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 5.3e-74 282.0 253 51.8
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 3.4e-73 279.3 202 63.4
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.7e-72 276.9 207 61.4
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 6.4e-72 275.0 193 64.8
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 3.2e-71 272.7 200 61.0
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 7.1e-71 271.6 200 60.5
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.2e-70 270.8 210 57.6
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 1.2e-70 270.8 222 55.4
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 2.7e-70 269.6 255 51.0
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 4.6e-70 268.9 202 64.4
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 6.4e-56 221.9 190 53.7
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.6e-54 217.2 351 36.5
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.6e-54 217.2 290 40.3
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 1.0e-53 214.5 180 55.0
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.8e-53 213.8 208 50.0
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 9.6e-52 208.0 259 40.9
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 4.0e-50 202.6 149 62.4
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 1.0e-48 198.0 274 38.0
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 3.2e-47 193.0 225 43.6
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 1.3e-40 171.0 188 46.8
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 1.5e-33 147.5 196 36.7
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 1.0e-29 134.8 170 41.8
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 4.4e-28 129.4 182 36.8
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 7.4e-28 128.6 136 52.2
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 2.5e-23 113.6 150 43.3
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 2.2e-19 100.5 248 30.6
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 8.2e-19 98.6 92 52.2
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 3.8e-16 89.7 160 33.8
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 1.2e-09 68.2 56 58.9
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 4.5e-09 66.2 76 42.1
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 2.9e-08 63.5 73 46.6
HanXRQChr08g0221941 Helianthus annuus HOM05D006653 ORTHO05D008346 2.1e-06 57.4 68 50.0


User provided reference genes

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