Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00570 Erythranthe guttata HOM05D007120 ORTHO05D008881 2.8e-28 127.9 63 100.0
MSTRG.27254 Avicennia marina HOM05D007120 ORTHO05D008881 3.8e-17 90.9 59 74.6
Cc02_g05250 Coffea canephora HOM05D007120 ORTHO05D008881 3.2e-16 87.8 62 62.9
Os07g0680300 Oryza sativa ssp. japonica HOM05D007120 ORTHO05D008881 3.2e-16 87.8 60 65.0
Lj1A968T57 Lonicera japonica HOM05D007120 ORTHO05D008881 7.2e-16 86.7 62 64.5
Peaxi162Scf00073g02342 Petunia axillaris HOM05D007120 ORTHO05D008881 3.6e-15 84.3 62 64.5
TAR369G0939 Trochodendron aralioides HOM05D007120 ORTHO05D008881 4.6e-15 84.0 60 63.3
Aqoxy4G03269 Aquilegia oxysepala HOM05D007120 ORTHO05D008881 6.1e-15 83.6 61 65.6
Nn2g10275 Nelumbo nucifera HOM05D007120 ORTHO05D008881 6.1e-15 83.6 56 67.9
Nitab4.5_0000171g0210 Nicotiana tabacum HOM05D007120 ORTHO05D008881 1.0e-14 82.8 62 62.9
MBI15_g39383_MAGBIO Magnolia biondii HOM05D007120 ORTHO05D008881 6.7e-14 80.1 57 66.7
CAN.G1229.12 Capsicum annuum HOM05D007120 ORTHO05D008881 8.7e-14 79.7 62 61.3
CiPaw.14G049800 Carya illinoinensis HOM05D007120 ORTHO05D008881 1.1e-13 79.3 52 67.3
Haze_17366 Corylus avellana HOM05D006907 ORTHO05D008598 1.1e-13 79.3 57 61.4
Oeu006064.1 Olea europaea HOM05D007120 ORTHO05D008881 1.5e-13 79.0 64 59.4
Atru.chr12.199 Acer truncatum HOM05D007120 ORTHO05D008881 3.3e-13 77.8 54 57.4
Cfa011840 Carpinus fangiana HOM05D007120 ORTHO05D008881 5.7e-13 77.0 49 69.4
RcHm_v2.0_Chr7g0235281 Rosa chinensis HOM05D007120 ORTHO05D008881 5.7e-13 77.0 57 57.9
RcHm_v2.0_Chr7g0235311 Rosa chinensis HOM05D007120 ORTHO05D008881 5.7e-13 77.0 57 57.9
RcHm_v2.0_Chr1g0372461 Rosa chinensis HOM05D007120 ORTHO05D008881 7.4e-13 76.6 53 60.4
CANSAT56G4069 Cannabis sativa HOM05D007120 ORTHO05D008881 9.7e-13 76.3 57 59.6
FAN03G2745 Fragaria x ananassa HOM05D007120 ORTHO05D008881 9.7e-13 76.3 58 60.3
Lsat_1_v5_gn_6_11060 Lactuca sativa HOM05D007120 ORTHO05D008881 9.7e-13 76.3 56 60.7
PGSC0003DMG400020601 Solanum tuberosum HOM05D007120 ORTHO05D008881 9.7e-13 76.3 62 59.7
Solyc03g095730.4 Solanum lycopersicum HOM05D007120 ORTHO05D008881 1.3e-12 75.9 59 61.0
GSVIVG01032659001 Vitis vinifera HOM05D007120 ORTHO05D008881 1.3e-12 75.9 54 63.0
Cfa001199 Carpinus fangiana HOM05D007120 ORTHO05D008881 1.6e-12 75.5 56 60.7
Dinv34497 Davidia involucrata HOM05D006907 ORTHO05D008598 1.6e-12 75.5 49 69.4
FvH4_7g26050 Fragaria vesca HOM05D007120 ORTHO05D008881 1.6e-12 75.5 50 62.0
FAN10G2835 Fragaria x ananassa HOM05D007120 ORTHO05D008881 1.6e-12 75.5 50 62.0
Gorai.013G008400 Gossypium raimondii HOM05D007120 ORTHO05D008881 1.6e-12 75.5 59 61.0
Hma1.2p1_0264F.1_g105975 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 1.6e-12 75.5 59 64.4
Hma1.2p1_1805F.1_g303200 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 1.6e-12 75.5 59 64.4
Potri.019G059500 Populus trichocarpa HOM05D007120 ORTHO05D008881 1.6e-12 75.5 59 57.6
CSS0015321 Camellia sinensis var. sinensis HOM05D007120 ORTHO05D008881 2.2e-12 75.1 48 66.7
Gohir.D06G187000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 2.2e-12 75.1 56 60.7
Gorai.010G219300 Gossypium raimondii HOM05D007120 ORTHO05D008881 2.2e-12 75.1 56 60.7
MD01G1169000 Malus domestica HOM05D007120 ORTHO05D008881 2.2e-12 75.1 51 66.7
HanXRQChr10g0312991 Helianthus annuus HOM05D007120 ORTHO05D008881 2.8e-12 74.7 55 58.2
HanXRQChr02g0048061 Helianthus annuus HOM05D007120 ORTHO05D008881 3.7e-12 74.3 56 57.1
MD07G1234900 Malus domestica HOM05D007120 ORTHO05D008881 3.7e-12 74.3 51 64.7
Nn5g26831 Nelumbo nucifera HOM05D007120 ORTHO05D008881 3.7e-12 74.3 56 60.7
Gohir.A06G180100 Gossypium hirsutum HOM05D007120 ORTHO05D008881 4.8e-12 73.9 56 58.9
Duzib128G0262 Durio zibethinus HOM05D007120 ORTHO05D008881 8.2e-12 73.2 58 55.2
Manes.07G142200 Manihot esculenta HOM05D007120 ORTHO05D008881 8.2e-12 73.2 59 55.9
Gohir.D13G008000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 1.4e-11 72.4 59 59.3
Lj1g0003388 Lotus japonicus HOM05D007120 ORTHO05D008881 1.4e-11 72.4 45 73.3
Medtr3g093810 Medicago truncatula HOM05D007120 ORTHO05D008881 2.4e-11 71.6 45 71.1
Hund13439 Selenicereus undatus HOM05D007120 ORTHO05D008881 2.4e-11 71.6 57 56.1
Glyma.06G141900 Glycine max HOM05D007120 ORTHO05D008881 4.1e-11 70.9 45 71.1
Phvul.009G043000 Phaseolus vulgaris HOM05D007120 ORTHO05D008881 6.9e-11 70.1 45 68.9
Prupe.2G265200 Prunus persica HOM05D007120 ORTHO05D008881 9.1e-11 69.7 52 61.5
Thecc.10G184500 Theobroma cacao HOM05D007120 ORTHO05D008881 9.1e-11 69.7 54 61.1
Lalb_Chr11g0067731 Lupinus albus HOM05D007120 ORTHO05D008881 1.2e-10 69.3 45 71.1
Glyma.04G223400 Glycine max HOM05D007120 ORTHO05D008881 1.5e-10 68.9 45 71.1
Gohir.A13G007800 Gossypium hirsutum HOM05D007120 ORTHO05D008881 1.5e-10 68.9 56 57.1
Manes.10G002800 Manihot esculenta HOM05D007120 ORTHO05D008881 2.6e-10 68.2 53 54.7
Lalb_Chr08g0239241 Lupinus albus HOM05D007120 ORTHO05D008881 3.4e-10 67.8 45 68.9
A03p22930 Brassica napus HOM05D007120 ORTHO05D008881 5.9e-10 67.0 60 48.3
BolC3t15101H Brassica oleracea HOM05D007120 ORTHO05D008881 5.9e-10 67.0 60 48.3
BraA03t11516Z Brassica rapa HOM05D007120 ORTHO05D008881 5.9e-10 67.0 60 48.3
DCAR_014662 Daucus carota HOM05D007120 ORTHO05D008881 5.9e-10 67.0 56 58.9
FAN21G2234 Fragaria x ananassa HOM05D007120 ORTHO05D008881 5.9e-10 67.0 59 57.6
FAN11G0923 Fragaria x ananassa HOM05D007120 ORTHO05D008881 1.0e-09 66.2 58 55.2
FAN01G0895 Fragaria x ananassa HOM05D007120 ORTHO05D008881 1.3e-09 65.9 67 47.8
Lalb_Chr23g0272151 Lupinus albus HOM05D007120 ORTHO05D008881 1.7e-09 65.5 45 64.4
Thhalv10017507m.g Eutrema salsugineum HOM05D007120 ORTHO05D008881 3.8e-09 64.3 58 50.0
MD03G1050700 Malus domestica HOM05D007120 ORTHO05D008881 5.0e-09 63.9 37 70.3
BcaB01g03516 Brassica carinata HOM05D007120 ORTHO05D008881 8.5e-09 63.2 57 47.4
Prupe.6G040200 Prunus persica HOM05D007120 ORTHO05D008881 1.9e-08 62.0 53 54.7
A04p31140 Brassica napus HOM05D007120 ORTHO05D008881 2.5e-08 61.6 55 45.5
BraA04t18569Z Brassica rapa HOM05D007120 ORTHO05D008881 2.5e-08 61.6 55 45.5
CiPaw.09G151000 Carya illinoinensis HOM05D007120 ORTHO05D008881 2.5e-08 61.6 52 53.8
Nitab4.5_0000375g0220 Nicotiana tabacum HOM05D007120 ORTHO05D008881 2.5e-08 61.6 69 47.8
ATR1127G135 Amborella trichopoda HOM05D007120 ORTHO05D008881 3.2e-08 61.2 54 50.0
Sp4g23080 Schrenkiella parvula HOM05D007120 ORTHO05D008881 3.2e-08 61.2 55 47.3
C04p68540 Brassica napus HOM05D007120 ORTHO05D008881 1.2e-07 59.3 55 45.5
BolC4t28353H Brassica oleracea HOM05D007120 ORTHO05D008881 1.2e-07 59.3 55 45.5
Hund15797 Selenicereus undatus HOM05D007120 ORTHO05D008881 1.6e-07 58.9 41 63.4
BcaC02g12732 Brassica carinata HOM05D007120 ORTHO05D008881 2.1e-07 58.5 45 53.3
A05p01890 Brassica napus HOM05D007120 ORTHO05D008881 2.1e-07 58.5 45 53.3
C04p02230 Brassica napus HOM05D007120 ORTHO05D008881 2.7e-07 58.2 45 51.1
BolC4t21869H Brassica oleracea HOM05D007120 ORTHO05D008881 2.7e-07 58.2 45 51.1
Carub.0004s2306 Capsella rubella HOM05D007120 ORTHO05D008881 2.7e-07 58.2 59 44.1
C01p26040 Brassica napus HOM05D007120 ORTHO05D008881 3.6e-07 57.8 45 53.3
Nitab4.5_0012297g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 3.6e-07 57.8 45 62.2
C04p16380 Brassica napus HOM05D007120 ORTHO05D008881 4.6e-07 57.4 42 57.1
Nitab4.5_0011372g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 4.6e-07 57.4 94 37.2
AL4G38650 Arabidopsis lyrata HOM05D007120 ORTHO05D008881 6.1e-07 57.0 59 44.1
AT2G40765 Arabidopsis thaliana HOM05D007120 ORTHO05D008881 6.1e-07 57.0 59 44.1
EL10Ac2g02666 Beta vulgaris HOM05D007120 ORTHO05D008881 7.9e-07 56.6 44 59.1
FAN06G1351 Fragaria x ananassa HOM05D007120 ORTHO05D008881 7.9e-07 56.6 32 68.8
Sc11g0006040 Simmondsia chinensis HOM05D007120 ORTHO05D008881 1.4e-06 55.8 42 64.3
CARHR135860 Cardamine hirsuta HOM05D007120 ORTHO05D008881 1.8e-06 55.5 55 43.6
CiPaw.13G063000 Carya illinoinensis HOM05D007120 ORTHO05D008881 1.8e-06 55.5 55 54.5
DCAR_018042 Daucus carota HOM05D007120 ORTHO05D008881 3.0e-06 54.7 44 52.3
Peaxi162Scf00184g00003 Petunia axillaris HOM05D007120 ORTHO05D008881 3.0e-06 54.7 57 49.1
C01p18970 Brassica napus HOM05D007120 ORTHO05D008881 3.9e-06 54.3 46 52.2
TAR633G1173 Trochodendron aralioides HOM05D009315 ORTHO05D008839 8.8e-06 53.1 53 49.1


User provided reference genes

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