Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00500 Erythranthe guttata HOM05D003935 ORTHO05D005096 3.9e-179 631.3 315 100.0
SGA_v2.0_scaffold44G16558 Striga asiatica HOM05D003935 ORTHO05D005096 6.2e-169 597.4 313 93.3
MSTRG.27208 Avicennia marina HOM05D003935 ORTHO05D005096 1.4e-168 596.3 315 93.3
Oeu031400.2 Olea europaea HOM05D003935 ORTHO05D005096 2.6e-167 592.0 316 92.7
CSS0046772 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 3.4e-167 591.7 315 93.0
Potri.001G126500 Populus trichocarpa HOM05D003935 ORTHO05D005096 1.1e-165 586.6 316 92.7
Hma1.2p1_1132F.1_g260170 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 2.5e-165 585.5 313 92.3
Manes.06G132800 Manihot esculenta HOM05D003935 ORTHO05D005096 4.2e-165 584.7 315 90.8
SalBow1G3743 Salvia bowleyana HOM05D003935 ORTHO05D005096 4.2e-165 584.7 315 92.4
Eucgr.K00175 Eucalyptus grandis HOM05D003935 ORTHO05D005096 5.5e-165 584.3 313 91.4
vmacro09915 Vaccinium macrocarpon HOM05D003935 ORTHO05D005096 5.5e-165 584.3 315 91.1
PGR142G1672 Punica granatum HOM05D003935 ORTHO05D005096 1.2e-164 583.2 314 91.1
Dinv16851 Davidia involucrata HOM05D003935 ORTHO05D005096 1.6e-164 582.8 315 91.4
Nn6g33882 Nelumbo nucifera HOM05D003935 ORTHO05D005096 2.1e-164 582.4 315 91.1
Aqoxy7G00829 Aquilegia oxysepala HOM05D003935 ORTHO05D005096 3.5e-164 581.6 313 90.7
CSS0045715 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 3.5e-164 581.6 315 91.7
Lj1C977G12 Lonicera japonica HOM05D003935 ORTHO05D005096 4.6e-164 581.3 338 87.0
Sopen06g010820 Solanum pennellii HOM05D003935 ORTHO05D005096 1.3e-163 579.7 315 91.1
TWI14G1423 Tripterygium wilfordii HOM05D003935 ORTHO05D005096 1.3e-163 579.7 315 89.8
Actinidia01047 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.8e-163 579.3 315 90.2
CAN.G330.5 Capsicum annuum HOM05D003935 ORTHO05D005096 3.0e-163 578.6 315 91.1
Rhsim09G0190400 Rhododendron simsii HOM05D003935 ORTHO05D005096 3.0e-163 578.6 330 87.6
Solyc06g034160.3 Solanum lycopersicum HOM05D003935 ORTHO05D005096 3.0e-163 578.6 315 90.8
TAR374G1483 Trochodendron aralioides HOM05D003935 ORTHO05D005096 3.0e-163 578.6 315 90.2
Thecc.01G388100 Theobroma cacao HOM05D003935 ORTHO05D005096 5.1e-163 577.8 315 90.2
Hma1.2p1_0432F.1_g151940 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 6.7e-163 577.4 313 90.1
Peaxi162Scf00304g01342 Petunia axillaris HOM05D003935 ORTHO05D005096 1.9e-162 575.9 315 90.8
Glyma.09G231000 Glycine max HOM05D003935 ORTHO05D005096 2.5e-162 575.5 313 88.8
MSTRG.8834 Avicennia marina HOM05D003935 ORTHO05D005096 4.3e-162 574.7 315 89.5
COL.COLO4_12445 Corchorus olitorius HOM05D003935 ORTHO05D005096 4.3e-162 574.7 315 89.5
Duzib133G0969 Durio zibethinus HOM05D003935 ORTHO05D005096 1.3e-161 573.2 316 89.2
Lalb_Chr19g0126281 Lupinus albus HOM05D003935 ORTHO05D005096 1.3e-161 573.2 315 88.3
Nitab4.5_0000448g0060 Nicotiana tabacum HOM05D003935 ORTHO05D005096 1.3e-161 573.2 315 89.8
PGSC0003DMG400021594 Solanum tuberosum HOM05D003935 ORTHO05D005096 2.1e-161 572.4 315 89.8
CANSAT21G2109 Cannabis sativa HOM05D003935 ORTHO05D005096 2.8e-161 572.0 315 88.3
Potri.003G107000 Populus trichocarpa HOM05D003935 ORTHO05D005096 2.8e-161 572.0 317 90.9
Cfa012922 Carpinus fangiana HOM05D003935 ORTHO05D005096 4.8e-161 571.2 315 87.6
Thhalv10004633m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 4.8e-161 571.2 316 88.3
Sabra01G0097600 Salix brachista HOM05D003935 ORTHO05D005096 6.3e-161 570.9 316 89.2
GSVIVG01018224001 Vitis vinifera HOM05D003935 ORTHO05D005096 6.3e-161 570.9 315 88.3
AL8G38190 Arabidopsis lyrata HOM05D003935 ORTHO05D005096 1.1e-160 570.1 315 87.0
CARHR275270 Cardamine hirsuta HOM05D003935 ORTHO05D005096 2.4e-160 568.9 315 87.0
Duzib138G0818 Durio zibethinus HOM05D003935 ORTHO05D005096 1.2e-159 566.6 316 89.2
Gorai.004G165200 Gossypium raimondii HOM05D003935 ORTHO05D005096 1.2e-159 566.6 316 89.2
Glyma.12G005700 Glycine max HOM05D003935 ORTHO05D005096 1.5e-159 566.2 315 87.6
Sp2g24700 Schrenkiella parvula HOM05D003935 ORTHO05D005096 1.5e-159 566.2 315 87.0
Carub.0008s2219 Capsella rubella HOM05D003935 ORTHO05D005096 2.0e-159 565.8 315 86.7
THA.LOC104819415 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 2.0e-159 565.8 315 87.6
Gohir.D08G159150 Gossypium hirsutum HOM05D003935 ORTHO05D005096 4.5e-159 564.7 316 88.9
AT5G61500 Arabidopsis thaliana HOM05D003935 ORTHO05D005096 1.0e-158 563.5 315 86.0
Lalb_Chr01g0000281 Lupinus albus HOM05D003935 ORTHO05D005096 1.3e-158 563.1 315 87.9
THA.LOC104801570 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 1.7e-158 562.8 315 87.0
HanXRQChr15g0485951 Helianthus annuus HOM05D003935 ORTHO05D005096 2.2e-158 562.4 315 85.4
Gohir.D07G154200 Gossypium hirsutum HOM05D003935 ORTHO05D005096 2.9e-158 562.0 316 88.3
Gorai.001G176400 Gossypium raimondii HOM05D003935 ORTHO05D005096 2.9e-158 562.0 316 88.3
QL04p034713 Quercus lobata HOM05D003935 ORTHO05D005096 2.9e-158 562.0 315 88.3
Gohir.A08G137866 Gossypium hirsutum HOM05D003935 ORTHO05D005096 5.0e-158 561.2 316 88.3
AUR62002246 Chenopodium quinoa HOM05D003935 ORTHO05D005096 6.5e-158 560.8 313 87.2
Cpa.g.sc16.168 Carica papaya HOM05D003935 ORTHO05D005096 2.5e-157 558.9 315 87.3
PSO782G0781 Papaver somniferum HOM05D003935 ORTHO05D005096 2.5e-157 558.9 315 88.9
QL02p025668 Quercus lobata HOM05D003935 ORTHO05D005096 2.5e-157 558.9 314 87.9
DCAR_020181 Daucus carota HOM05D003935 ORTHO05D005096 4.2e-157 558.1 315 86.0
Gohir.A07G148000 Gossypium hirsutum HOM05D003935 ORTHO05D005096 4.2e-157 558.1 316 87.3
Phvul.011G006500 Phaseolus vulgaris HOM05D003935 ORTHO05D005096 7.2e-157 557.4 315 86.7
Nitab4.5_0000262g0090 Nicotiana tabacum HOM05D003935 ORTHO05D005096 9.3e-157 557.0 315 88.3
PSO063G2499 Papaver somniferum HOM05D003935 ORTHO05D005096 9.3e-157 557.0 315 88.6
VMungo1127G0071 Vigna mungo HOM05D003935 ORTHO05D005096 9.3e-157 557.0 315 85.7
BcaC06g33155 Brassica carinata HOM05D003935 ORTHO05D005096 1.2e-156 556.6 315 85.1
Atru.chr1.845 Acer truncatum HOM05D003935 ORTHO05D005096 1.6e-156 556.2 313 86.9
CsaV3_6G008640 Cucumis sativus L. HOM05D003935 ORTHO05D005096 1.6e-156 556.2 314 85.0
Thhalv10014155m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 2.1e-156 555.8 315 85.7
Lsat_1_v5_gn_5_9340 Lactuca sativa HOM05D003935 ORTHO05D005096 2.7e-156 555.4 315 84.8
Lj3g0013928 Lotus japonicus HOM05D003935 ORTHO05D005096 4.6e-156 554.7 315 85.1
Sp6g35250 Schrenkiella parvula HOM05D003935 ORTHO05D005096 4.6e-156 554.7 315 85.7
CiPaw.14G023500 Carya illinoinensis HOM05D003935 ORTHO05D005096 6.1e-156 554.3 315 85.7
TPR.G3680 Trifolium pratense HOM05D003935 ORTHO05D005096 7.9e-156 553.9 315 86.3
Cc02_g04470 Coffea canephora HOM05D003935 ORTHO05D005096 1.8e-155 552.7 319 85.0
Psat7g207040 Pisum sativum HOM05D003935 ORTHO05D005096 1.8e-155 552.7 315 86.0
Sed0016106 Sechium edule HOM05D003935 ORTHO05D005096 1.8e-155 552.7 314 84.7
Actinidia13591 Actinidia chinensis HOM05D003935 ORTHO05D005096 2.3e-155 552.4 309 89.0
MELO3C022280.2 Cucumis melo HOM05D003935 ORTHO05D005096 2.3e-155 552.4 314 85.0
ClCG06G002480 Citrullus lanatus HOM05D003935 ORTHO05D005096 3.0e-155 552.0 314 84.7
arahy.Tifrunner.gnm1.ann1.YZL4IN Arachis hypogaea HOM05D003935 ORTHO05D005096 3.9e-155 551.6 314 86.6
Medtr4g036265 Medicago truncatula HOM05D003935 ORTHO05D005096 6.7e-155 550.8 315 85.4
unitig_37.g12492 Utricularia gibba HOM05D003935 ORTHO05D005096 1.5e-154 549.7 315 86.7
Aa31LG11G1910 Aethionema arabicum HOM05D003935 ORTHO05D005096 1.9e-154 549.3 312 85.3
HanXRQChr16g0512861 Helianthus annuus HOM05D003935 ORTHO05D005096 3.3e-154 548.5 315 84.4
Haze_21276 Corylus avellana HOM05D003935 ORTHO05D005096 4.3e-154 548.1 322 84.5
Sabra03G0073800 Salix brachista HOM05D003935 ORTHO05D005096 4.8e-153 544.7 383 75.5
Rhsim03G0165100 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.8e-152 542.7 337 81.0
BolC7t45044H Brassica oleracea HOM05D003935 ORTHO05D005096 4.1e-152 541.6 316 83.5
C07p45210 Brassica napus HOM05D003935 ORTHO05D005096 2.6e-151 538.9 316 83.2
arahy.Tifrunner.gnm1.ann1.2B4GQV Arachis hypogaea HOM05D003935 ORTHO05D005096 1.7e-150 536.2 314 84.1
FvH4_7g09530 Fragaria vesca HOM05D003935 ORTHO05D005096 3.8e-150 535.0 317 84.2
FAN01G1603 Fragaria x ananassa HOM05D003935 ORTHO05D005096 3.8e-150 535.0 317 84.5
FAN03G1633 Fragaria x ananassa HOM05D003935 ORTHO05D005096 3.8e-150 535.0 317 84.5
FAN06G4162 Fragaria x ananassa HOM05D003935 ORTHO05D005096 3.8e-150 535.0 317 84.5
FAN06G5089 Fragaria x ananassa HOM05D003935 ORTHO05D005096 3.8e-150 535.0 317 84.2
FAN10G2569 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.1e-149 533.5 317 83.9
FAN10G4028 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.1e-149 533.5 317 83.9
Prupe.2G123000 Prunus persica HOM05D003935 ORTHO05D005096 1.1e-149 533.5 315 84.4
MD02G1218100 Malus domestica HOM05D003935 ORTHO05D005096 1.4e-149 533.1 315 84.8
arahy.Tifrunner.gnm1.ann1.16SP4W Arachis hypogaea HOM05D003935 ORTHO05D005096 1.9e-149 532.7 314 83.8
CDE04G2838 Ceratophyllum demersum HOM05D003935 ORTHO05D005096 5.5e-149 531.2 306 85.9
BcaB05g21604 Brassica carinata HOM05D003935 ORTHO05D005096 1.8e-147 526.2 317 82.6
RcHm_v2.0_Chr1g0346321 Rosa chinensis HOM05D003935 ORTHO05D005096 3.0e-147 525.4 317 83.9
BolC2t06285H Brassica oleracea HOM05D003935 ORTHO05D005096 3.3e-146 521.9 316 82.6
Hund04562 Selenicereus undatus HOM05D003935 ORTHO05D005096 7.4e-146 520.8 310 82.3
arahy.Tifrunner.gnm1.ann1.9TCX0P Arachis hypogaea HOM05D003935 ORTHO05D005096 3.7e-145 518.5 309 83.8
Ciclev10005442m.g Citrus clementina HOM05D003935 ORTHO05D005096 1.4e-144 516.5 321 80.1
EL10Ac3g05885 Beta vulgaris HOM05D003935 ORTHO05D005096 1.0e-142 510.4 285 87.0
BcaC03g13194 Brassica carinata HOM05D003935 ORTHO05D005096 1.4e-141 506.5 315 81.0
BraA02t04926Z Brassica rapa HOM05D003935 ORTHO05D005096 1.9e-141 506.1 315 80.6
ECA232G4201 Erigeron canadensis HOM05D003935 ORTHO05D005096 3.2e-141 505.4 296 82.1
Nitab4.5_0001267g0110 Nicotiana tabacum HOM05D003935 ORTHO05D005096 4.2e-141 505.0 282 88.3
Sc10g0008570 Simmondsia chinensis HOM05D003935 ORTHO05D005096 1.6e-140 503.1 283 85.9
Ah.07g207480 Amaranthus hybridus HOM05D003935 ORTHO05D005096 6.1e-140 501.1 288 85.4
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 1.8e-139 499.6 311 80.4
CiPaw.07G237000 Carya illinoinensis HOM05D003935 ORTHO05D005096 6.7e-139 497.7 326 77.0
Mapoly0003s0208 Marchantia polymorpha HOM05D003935 ORTHO05D005096 8.8e-139 497.3 320 76.2
Aa31LG3G18800 Aethionema arabicum HOM05D003935 ORTHO05D005096 4.4e-138 495.0 313 80.2
Ca_12623_v3 Cicer arietinum L. HOM05D003935 ORTHO05D005096 1.3e-137 493.4 315 79.0
Haze_02753 Corylus avellana HOM05D003935 ORTHO05D005096 2.8e-137 492.3 463 58.7
BraA03t13837Z Brassica rapa HOM05D003935 ORTHO05D005096 3.7e-137 491.9 315 78.1
A03p47100 Brassica napus HOM05D003935 ORTHO05D005096 1.1e-136 490.3 315 77.8
Pp3c8_11900 Physcomitrium patens HOM05D003935 ORTHO05D005096 1.7e-134 483.0 310 77.7
Lsat_1_v5_gn_9_51820 Lactuca sativa HOM05D003935 ORTHO05D005096 1.1e-133 480.3 313 77.0
Os01g0200000 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 2.9e-126 455.7 316 73.1
SMO134G0003 Selaginella moellendorffii HOM05D003935 ORTHO05D005096 5.2e-123 444.9 312 68.3
BcaC06g33158 Brassica carinata HOM05D003935 ORTHO05D005096 8.8e-123 444.1 262 84.0
Actinidia24986 Actinidia chinensis HOM05D003935 ORTHO05D005096 2.0e-122 443.0 240 90.4
ATR0057G070 Amborella trichopoda HOM05D003935 ORTHO05D005096 1.1e-120 437.2 284 75.4
Zm00001eb391210 Zea mays HOM05D003935 ORTHO05D005096 2.5e-117 426.0 314 69.1
AUR62015457 Chenopodium quinoa HOM05D003935 ORTHO05D005096 9.5e-101 370.9 213 84.0
Nitab4.5_0001358g0020 Nicotiana tabacum HOM05D003935 ORTHO05D005096 1.8e-83 313.5 177 86.4
CBR_g28076 Chara braunii HOM05D003935 ORTHO05D000002 1.2e-82 310.8 252 61.5
Dinv06578 Davidia involucrata HOM05D003935 ORTHO05D005096 3.4e-82 309.3 173 87.9
MD07G1099100 Malus domestica HOM05D003935 ORTHO05D005096 2.2e-81 306.6 192 80.2
MCO14G260 Micromonas commoda HOM05D003935 ORTHO05D005096 4.9e-73 278.9 314 49.0
Cre02.g102350 Chlamydomonas reinhardtii HOM05D003935 ORTHO05D005096 1.9e-72 276.9 312 48.7
arahy.Tifrunner.gnm1.ann1.VY970J Arachis hypogaea HOM05D003935 ORTHO05D005096 5.1e-70 268.9 163 81.0
AagrBONN_evm.TU.Sc2ySwM_369.216 Anthoceros agrestis HOM05D003935 ORTHO05D005096 1.5e-69 267.3 274 54.0
Nn051s41922 Nelumbo nucifera HOM05D003935 ORTHO05D005096 4.8e-68 262.3 151 84.1
Nn1g09078 Nelumbo nucifera HOM05D003935 ORTHO05D005096 4.8e-68 262.3 151 84.1
SEGI_20183 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 3.8e-65 252.7 189 64.6
arahy.Tifrunner.gnm1.ann1.XHAQ77 Arachis hypogaea HOM05D003935 ORTHO05D005096 2.5e-61 240.0 184 69.6
CsaV3_4G004080 Cucumis sativus L. HOM05D003935 ORTHO05D044846 1.4e-59 234.2 288 48.6
PRCOL_00004022 Prasinoderma coloniale HOM05D003935 ORTHO05D005096 4.0e-59 232.6 300 43.3
Nitab4.5_0001358g0040 Nicotiana tabacum HOM05D003935 ORTHO05D001473 2.6e-58 229.9 112 97.3
Haze_27326 Corylus avellana HOM05D003935 ORTHO05D005096 1.4e-56 224.2 306 41.2
Os10g0560450 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 4.6e-55 219.2 185 63.2
MELO3C032833.2 Cucumis melo HOM05D003935 ORTHO05D044846 9.3e-48 194.9 301 43.5
Rhsim01G0073400 Rhododendron simsii HOM05D003935 ORTHO05D005096 4.6e-47 192.6 149 69.8
Rhsim06G0236800 Rhododendron simsii HOM05D003935 ORTHO05D005096 5.1e-46 189.1 142 70.4
Zm00001eb363440 Zea mays HOM05D003935 ORTHO05D005096 2.5e-45 186.8 113 77.0
Zm00001eb216570 Zea mays HOM05D003935 ORTHO05D005096 5.7e-45 185.7 128 70.3
Zm00001eb003720 Zea mays HOM05D003935 ORTHO05D005096 9.7e-45 184.9 113 76.1
Zm00001eb078430 Zea mays HOM05D003935 ORTHO05D005096 9.7e-45 184.9 113 76.1
SEGI_13739 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 4.8e-44 182.6 103 83.5
BcaB05g21605 Brassica carinata HOM05D003935 ORTHO05D005096 6.3e-44 182.2 137 66.4
Rhsim11G0131000 Rhododendron simsii HOM05D003935 ORTHO05D005096 2.0e-42 177.2 179 58.1
AL7G47000 Arabidopsis lyrata HOM05D003935 ORTHO05D003430 2.2e-41 173.7 169 55.6
Lj2A404G32 Lonicera japonica HOM05D000092 ORTHO05D000042 9.7e-37 158.3 277 36.1
Rhsim06G0096100 Rhododendron simsii HOM05D003935 ORTHO05D005096 5.3e-35 152.5 116 71.6
BcaB01g00746 Brassica carinata HOM05D003935 ORTHO05D005096 1.6e-31 141.0 108 64.8
BcaC04g19029 Brassica carinata HOM05D003935 ORTHO05D005096 5.1e-30 136.0 114 64.9
SEGI_32586 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 1.5e-26 124.4 68 83.8
A09p20840 Brassica napus HOM05D000772 ORTHO05D003239 6.5e-25 119.0 80 75.0
BraA09t37687Z Brassica rapa HOM05D000772 ORTHO05D003239 6.5e-25 119.0 80 75.0
MD07G1099000 Malus domestica HOM05D003935 ORTHO05D005096 2.7e-23 113.6 60 83.3
CBR_g28077 Chara braunii HOM05D003935 ORTHO05D005096 1.7e-20 104.4 72 63.9
Actinidia10778 Actinidia chinensis HOM05D003935 ORTHO05D005096 6.3e-20 102.4 90 67.8
arahy.Tifrunner.gnm1.ann1.W2J7UU Arachis hypogaea HOM05D003935 ORTHO05D023770 2.4e-19 100.5 53 86.8
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 3.1e-19 100.1 117 45.3
C03p26610 Brassica napus HOM05D003935 ORTHO05D023770 1.0e-17 95.1 53 83.0
SalBow2G0135 Salvia bowleyana HOM05D003935 ORTHO05D357983 1.1e-16 91.7 47 89.4
Zm00001eb269920 Zea mays HOM05D001580 ORTHO05D001517 5.5e-16 89.4 52 82.7
Rhsim12G0075300 Rhododendron simsii HOM05D016728 ORTHO05D338590 1.6e-15 87.8 102 52.9
BcaC03g17887 Brassica carinata HOM05D003935 ORTHO05D005096 2.7e-10 70.5 44 77.3
Zm00001eb395010 Zea mays HOM05D034860 ORTHO05D442630 1.0e-06 58.5 37 67.6
BcaC02g10492 Brassica carinata HOM05D036142 ORTHO05D023770 3.0e-06 57.0 33 84.8
C04p28240 Brassica napus HOM05D036142 ORTHO05D023770 3.0e-06 57.0 33 84.8
BolC4t24369H Brassica oleracea HOM05D036142 ORTHO05D023770 3.0e-06 57.0 33 84.8
Zm00001eb363380 Zea mays HOM05D003935 ORTHO05D445556 8.8e-06 55.5 37 64.9


User provided reference genes

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