Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 1.0e-133 479.9 220 100.0
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 1.1e-90 337.0 218 68.8
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 2.6e-89 332.4 223 67.3
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 5.8e-89 331.3 224 66.1
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 5.8e-89 331.3 217 67.7
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 6.4e-88 327.8 214 68.7
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 2.4e-87 325.9 217 65.4
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 3.2e-87 325.5 227 67.0
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 3.2e-87 325.5 213 66.7
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 4.2e-87 325.1 239 64.0
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 9.3e-87 323.9 227 67.4
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.2e-86 323.6 225 64.9
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 1.2e-86 323.6 222 65.3
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 1.6e-86 323.2 219 66.2
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 1.6e-86 323.2 218 67.4
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 2.1e-86 322.8 219 66.7
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 2.1e-86 322.8 226 65.9
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 2.1e-86 322.8 224 64.7
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 3.5e-86 322.0 219 66.7
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 4.6e-86 321.6 219 66.2
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 4.6e-86 321.6 224 64.3
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 1.0e-85 320.5 218 64.7
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 1.0e-85 320.5 218 66.1
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.0e-85 320.5 221 67.0
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 1.3e-85 320.1 216 66.2
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.8e-85 319.7 220 66.4
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.8e-85 319.7 220 67.7
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.3e-85 319.3 214 65.9
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.3e-85 319.3 214 65.9
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 2.3e-85 319.3 218 67.0
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.0e-85 318.9 217 63.1
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 3.9e-85 318.5 215 64.2
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 3.9e-85 318.5 220 66.4
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 5.1e-85 318.2 221 66.5
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 8.7e-85 317.4 219 64.8
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.1e-84 317.0 214 65.9
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.1e-84 317.0 215 65.1
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 1.5e-84 316.6 216 65.3
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.5e-84 316.6 217 65.9
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 2.5e-84 315.8 215 65.6
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 2.5e-84 315.8 226 65.5
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 3.3e-84 315.5 225 64.0
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 3.3e-84 315.5 217 65.9
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 3.3e-84 315.5 219 65.3
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 7.4e-84 314.3 215 64.2
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 7.4e-84 314.3 215 64.7
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 7.4e-84 314.3 224 63.8
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 1.6e-83 313.2 215 65.6
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 2.1e-83 312.8 222 65.8
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.1e-83 312.8 260 55.4
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 1.1e-82 310.5 222 64.9
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 1.8e-82 309.7 219 65.3
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 9.0e-82 307.4 225 63.1
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.2e-81 307.0 221 64.7
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 1.5e-81 306.6 227 62.1
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 3.4e-81 305.4 220 62.7
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 5.8e-81 304.7 219 62.6
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 5.8e-81 304.7 217 64.1
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.0e-80 303.9 220 64.1
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.3e-80 303.5 218 61.9
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 1.7e-80 303.1 216 62.5
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 2.2e-80 302.8 218 61.5
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 2.2e-80 302.8 221 64.3
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.2e-80 302.8 220 64.1
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 3.8e-80 302.0 214 63.1
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.1e-79 300.4 231 60.6
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 1.4e-79 300.1 219 60.7
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 7.1e-79 297.7 216 62.5
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 7.1e-79 297.7 216 62.5
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 9.3e-79 297.4 221 61.1
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 2.7e-78 295.8 192 70.8
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 3.5e-78 295.4 227 56.8
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 6.0e-78 294.7 289 52.2
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 1.3e-77 293.5 217 63.6
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 2.3e-77 292.7 216 61.1
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 2.1e-75 286.2 188 68.6
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 8.2e-75 284.3 228 60.1
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.8e-74 283.1 220 61.4
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 3.1e-74 282.3 219 61.2
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 3.1e-74 282.3 219 61.2
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.6e-73 279.3 193 65.3
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 3.4e-73 278.9 235 57.0
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.5e-73 278.5 194 64.9
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 4.5e-73 278.5 216 57.9
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 7.6e-73 277.7 191 63.9
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 1.7e-72 276.6 195 66.2
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 6.5e-72 274.6 226 61.1
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 9.3e-71 270.8 266 50.0
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.6e-70 270.0 195 64.6
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.0e-69 267.3 193 66.3
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 3.0e-69 265.8 182 64.8
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 6.7e-69 264.6 182 62.6
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 1.9e-68 263.1 186 62.9
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 9.7e-68 260.8 182 63.7
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 1.6e-67 260.0 182 63.2
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 6.3e-67 258.1 186 62.4
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.1e-66 257.3 190 63.7
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 2.6e-65 252.7 200 59.5
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 4.5e-65 251.9 185 61.6
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.9e-64 249.2 183 63.4
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 8.5e-64 247.7 188 59.0
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.4e-63 246.9 220 51.8
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 7.2e-63 244.6 185 57.8
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 9.4e-63 244.2 218 56.9
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 2.3e-61 239.6 187 62.0
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 2.3e-61 239.6 187 62.0
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.3e-61 239.6 201 57.7
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 4.8e-59 231.9 219 53.0
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.2e-57 227.3 194 56.7
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 5.0e-56 221.9 196 54.6
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.5e-52 210.3 222 45.5
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 3.8e-48 195.7 151 61.6
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 7.2e-47 191.4 136 64.7
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 2.8e-43 179.5 127 62.2
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 5.4e-34 148.7 77 76.6
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 7.2e-31 138.3 86 66.3
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 3.9e-16 89.4 191 33.0
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 3.9e-08 62.8 61 41.0


User provided reference genes

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