Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 4.8e-137 491.1 240 100.0
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 1.5e-106 389.8 240 80.4
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.7e-102 376.3 241 75.9
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 2.8e-97 359.0 287 65.2
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 4.1e-96 355.1 241 73.0
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.1e-96 355.1 240 71.7
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 5.4e-96 354.8 247 70.0
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.6e-95 353.2 241 72.6
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 7.8e-95 350.9 245 72.2
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.3e-94 350.1 240 72.1
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.7e-94 349.7 241 71.8
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 2.9e-94 349.0 241 71.4
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.9e-94 349.0 245 71.8
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 3.8e-94 348.6 242 69.0
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 3.8e-94 348.6 242 72.7
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 3.8e-94 348.6 237 70.5
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 6.6e-94 347.8 238 71.0
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 1.5e-93 346.7 240 70.4
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 4.3e-93 345.1 241 71.0
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 4.3e-93 345.1 240 69.6
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.2e-92 343.6 241 70.5
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 2.1e-92 342.8 241 68.5
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 2.1e-92 342.8 241 70.1
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 2.1e-92 342.8 239 72.0
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.8e-92 342.4 241 70.5
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 2.8e-92 342.4 241 70.5
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 4.7e-92 341.7 241 70.1
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 1.4e-91 340.1 239 69.9
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.8e-91 339.7 242 71.5
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 1.8e-91 339.7 241 68.9
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.3e-91 339.3 241 70.5
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 3.0e-91 339.0 241 70.1
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.2e-91 338.2 237 70.5
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 5.2e-91 338.2 244 69.7
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 6.8e-91 337.8 238 68.9
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 2.0e-90 336.3 243 68.7
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.0e-90 336.3 241 67.6
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 2.0e-90 336.3 239 69.0
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 2.6e-90 335.9 239 69.5
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 3.4e-90 335.5 240 70.0
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 7.5e-90 334.3 239 71.1
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 9.8e-90 334.0 240 67.9
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 2.2e-89 332.8 241 69.3
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 2.2e-89 332.8 241 68.9
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.7e-89 332.0 252 66.7
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 3.7e-89 332.0 241 66.8
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 4.9e-89 331.6 241 68.5
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 6.4e-89 331.3 241 67.6
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 6.4e-89 331.3 221 70.1
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 8.3e-89 330.9 241 66.4
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.8e-88 329.7 241 67.6
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 2.4e-88 329.3 242 65.7
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 2.4e-88 329.3 245 69.0
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 3.2e-88 328.9 240 70.8
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 4.1e-88 328.6 233 68.7
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.1e-88 328.6 236 68.6
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 9.2e-88 327.4 239 66.5
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 3.5e-87 325.5 240 66.7
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 5.9e-87 324.7 220 71.4
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.0e-86 323.9 236 67.8
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 1.7e-86 323.2 225 70.7
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 2.3e-86 322.8 241 66.0
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.3e-86 322.8 237 68.4
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 3.0e-86 322.4 239 67.8
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 3.9e-86 322.0 236 65.3
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 6.6e-86 321.2 221 70.1
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 8.6e-86 320.9 237 65.4
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.9e-85 319.7 243 68.3
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.9e-85 319.7 236 64.4
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.5e-85 319.3 243 67.9
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 3.3e-85 318.9 236 66.5
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 4.3e-85 318.5 220 68.2
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 4.3e-85 318.5 224 69.6
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 5.6e-85 318.2 240 65.4
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 5.6e-85 318.2 241 65.1
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 9.5e-85 317.4 236 64.4
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 1.2e-84 317.0 229 68.1
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 3.6e-84 315.5 309 56.0
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.1e-83 312.4 243 67.1
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 6.8e-83 311.2 236 65.7
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 2.6e-82 309.3 221 65.6
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 7.5e-82 307.8 234 63.7
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.3e-81 307.0 238 64.7
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 8.3e-81 304.3 221 66.1
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 2.4e-80 302.8 230 64.8
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 3.2e-80 302.4 229 64.6
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 4.1e-80 302.0 199 71.4
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 4.1e-80 302.0 197 73.6
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.2e-79 300.4 226 63.7
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.6e-79 300.1 240 62.1
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.6e-79 300.1 240 62.1
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 3.5e-79 298.9 239 61.9
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 3.5e-79 298.9 242 61.2
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 3.5e-79 298.9 242 61.2
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 1.7e-78 296.6 211 66.8
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 2.3e-78 296.2 241 60.6
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 1.5e-77 293.5 218 66.1
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.5e-77 293.5 231 64.1
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.9e-77 293.1 196 71.4
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.6e-76 290.0 233 61.8
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 4.1e-72 275.4 240 58.8
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 4.6e-71 271.9 195 67.2
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 7.8e-71 271.2 199 64.8
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 8.1e-68 261.2 230 56.1
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 6.4e-65 251.5 189 65.6
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 1.1e-64 250.8 186 65.6
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 6.0e-63 245.0 199 63.3
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 3.9e-62 242.3 223 53.4
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.1e-61 240.7 214 58.9
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.4e-59 233.0 269 50.6
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 1.7e-57 226.9 223 51.6
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.3e-54 217.2 236 47.9
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 5.6e-53 211.8 190 58.4
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 1.8e-51 206.8 194 55.2
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.1e-51 206.1 143 69.2
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 7.6e-50 201.4 141 68.1
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.0e-46 191.0 116 75.9
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.1e-29 134.4 93 68.8
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 1.5e-29 134.0 185 38.9
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.3e-25 120.9 209 37.8
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.9e-21 107.1 219 32.4
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 5.7e-21 105.5 259 29.7
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 5.9e-18 95.5 185 36.2
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 2.3e-14 83.6 48 75.0
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.8e-12 76.6 48 72.9
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 2.4e-11 73.6 60 55.0
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 7.2e-08 62.0 34 76.5


User provided reference genes

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