Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00365 Erythranthe guttata HOM05D005649 ORTHO05D006837 1.1e-47 193.0 98 100.0
Migut.F01138 Erythranthe guttata HOM05D005649 ORTHO05D006837 4.2e-23 111.3 89 59.6
Nitab4.5_0004480g0060 Nicotiana tabacum HOM05D005649 ORTHO05D006837 6.7e-21 104.0 96 52.1
Solyc01g009590.3 Solanum lycopersicum HOM05D005649 ORTHO05D006837 1.5e-20 102.8 78 59.0
Peaxi162Scf00040g00425 Petunia axillaris HOM05D005649 ORTHO05D006837 4.4e-20 101.3 97 54.6
Sopen01g005120 Solanum pennellii HOM05D005649 ORTHO05D006837 4.4e-20 101.3 70 60.0
CAN.G769.4 Capsicum annuum HOM05D005649 ORTHO05D006837 9.7e-20 100.1 95 53.7
Nitab4.5_0002107g0070 Nicotiana tabacum HOM05D005649 ORTHO05D006837 1.7e-19 99.4 96 51.0
Prupe.2G290900 Prunus persica HOM05D005649 ORTHO05D006837 1.7e-19 99.4 90 52.2
Hma1.2p1_1323F.1_g275520 Hydrangea macrophylla HOM05D005649 ORTHO05D006837 6.3e-19 97.4 92 55.4
CiPaw.04G066700 Carya illinoinensis HOM05D005649 ORTHO05D006837 8.2e-19 97.1 100 46.0
Ciclev10006307m.g Citrus clementina HOM05D005649 ORTHO05D006837 1.1e-18 96.7 87 56.3
Glyma.09G144000 Glycine max HOM05D005649 ORTHO05D006837 1.1e-18 96.7 100 55.0
Actinidia03109 Actinidia chinensis HOM05D005649 ORTHO05D006837 1.8e-18 95.9 93 57.0
Solyc03g026115.1 Solanum lycopersicum HOM05D005649 ORTHO05D006837 1.8e-18 95.9 97 50.5
PGR042G0682 Punica granatum HOM05D005649 ORTHO05D006837 4.1e-18 94.7 94 53.2
Sc13g0008480 Simmondsia chinensis HOM05D005649 ORTHO05D006837 5.3e-18 94.4 86 55.8
Atru.chr1.509 Acer truncatum HOM05D005649 ORTHO05D006837 7.0e-18 94.0 84 50.0
Potri.015G139100 Populus trichocarpa HOM05D005649 ORTHO05D006837 7.0e-18 94.0 96 49.0
SGA_v2.0_scaffold10G05368 Striga asiatica HOM05D005649 ORTHO05D006837 7.0e-18 94.0 98 54.1
DCAR_018177 Daucus carota HOM05D005649 ORTHO05D006837 9.1e-18 93.6 92 51.1
Solyc06g035820.1 Solanum lycopersicum HOM05D005649 ORTHO05D006837 9.1e-18 93.6 95 49.5
Actinidia34088 Actinidia chinensis HOM05D005649 ORTHO05D006837 1.2e-17 93.2 69 53.6
Dinv35188 Davidia involucrata HOM05D005649 ORTHO05D006837 1.6e-17 92.8 88 50.0
Glyma.16G197100 Glycine max HOM05D005649 ORTHO05D006837 1.6e-17 92.8 99 51.5
Sabra15G0150200 Salix brachista HOM05D005649 ORTHO05D006837 1.6e-17 92.8 92 51.1
SalBow2G3129 Salvia bowleyana HOM05D005649 ORTHO05D006837 1.6e-17 92.8 82 58.5
Gohir.A11G009800 Gossypium hirsutum HOM05D005649 ORTHO05D006837 2.6e-17 92.0 87 52.9
Gohir.D11G009100 Gossypium hirsutum HOM05D005649 ORTHO05D006837 2.6e-17 92.0 87 52.9
Gorai.007G010700 Gossypium raimondii HOM05D005649 ORTHO05D006837 2.6e-17 92.0 87 52.9
Oeu062770.1 Olea europaea HOM05D005649 ORTHO05D006837 3.5e-17 91.7 92 48.9
CAN.G28.8 Capsicum annuum HOM05D005649 ORTHO05D006837 4.5e-17 91.3 98 48.0
AUR62021224 Chenopodium quinoa HOM05D005649 ORTHO05D006837 5.9e-17 90.9 97 48.5
Duzib068G0970 Durio zibethinus HOM05D005649 ORTHO05D006837 5.9e-17 90.9 70 58.6
DCAR_018179 Daucus carota HOM05D005649 ORTHO05D006837 7.7e-17 90.5 95 48.4
Gohir.D09G040900 Gossypium hirsutum HOM05D005649 ORTHO05D006837 7.7e-17 90.5 96 50.0
MD01G1197500 Malus domestica HOM05D005649 ORTHO05D006837 7.7e-17 90.5 87 48.3
SalBow6G0552 Salvia bowleyana HOM05D000001 ORTHO05D010467 7.7e-17 90.5 77 54.5
TAR629G2474 Trochodendron aralioides HOM05D005649 ORTHO05D006837 7.7e-17 90.5 92 46.7
Haze_13744 Corylus avellana HOM05D005649 ORTHO05D006837 1.0e-16 90.1 88 51.1
Peaxi162Scf00132g01516 Petunia axillaris HOM05D005649 ORTHO05D006837 1.0e-16 90.1 80 50.0
SalBow6G6599 Salvia bowleyana HOM05D000001 ORTHO05D010467 1.0e-16 90.1 77 53.2
DCAR_014595 Daucus carota HOM05D005649 ORTHO05D006837 1.3e-16 89.7 95 42.1
EL10Ac3g05710 Beta vulgaris HOM05D005649 ORTHO05D006837 2.9e-16 88.6 96 47.9
CSS0017664 Camellia sinensis var. sinensis HOM05D005649 ORTHO05D006837 2.9e-16 88.6 92 47.8
COL.COLO4_14273 Corchorus olitorius HOM05D005649 ORTHO05D006837 3.8e-16 88.2 90 48.9
Manes.14G028300 Manihot esculenta HOM05D005649 ORTHO05D006837 3.8e-16 88.2 94 45.7
Ca_10790_v3 Cicer arietinum L. HOM05D005649 ORTHO05D006837 6.5e-16 87.4 95 48.4
HanXRQChr14g0462161 Helianthus annuus HOM05D005649 ORTHO05D006837 6.5e-16 87.4 86 53.5
CANSAT21G0877 Cannabis sativa HOM05D005649 ORTHO05D006837 8.5e-16 87.0 100 45.0
Potri.012G137400 Populus trichocarpa HOM05D005649 ORTHO05D006837 1.1e-15 86.7 96 43.8
Thecc.03G171600 Theobroma cacao HOM05D005649 ORTHO05D006837 1.1e-15 86.7 86 53.5
CAN.G166.5 Capsicum annuum HOM05D005649 ORTHO05D006837 1.5e-15 86.3 96 46.9
FvH4_7g29091 Fragaria vesca HOM05D005649 ORTHO05D006837 1.9e-15 85.9 99 46.5
FAN03G0279 Fragaria x ananassa HOM05D005649 ORTHO05D006837 1.9e-15 85.9 99 46.5
Aqoxy7G00428 Aquilegia oxysepala HOM05D005649 ORTHO05D006837 2.5e-15 85.5 92 48.9
AUR62016019 Chenopodium quinoa HOM05D005649 ORTHO05D006837 2.5e-15 85.5 99 48.5
Gohir.A12G260100 Gossypium hirsutum HOM05D005649 ORTHO05D006837 2.5e-15 85.5 87 54.0
CiPaw.03G103300 Carya illinoinensis HOM05D005649 ORTHO05D006837 3.2e-15 85.1 97 45.4
Lalb_Chr19g0130991 Lupinus albus HOM05D005649 ORTHO05D006837 3.2e-15 85.1 84 51.2
RcHm_v2.0_Chr1g0376811 Rosa chinensis HOM05D005649 ORTHO05D006837 3.2e-15 85.1 92 46.7
PGSC0003DMG400004517 Solanum tuberosum HOM05D000087 ORTHO05D000439 3.2e-15 85.1 83 45.8
Medtr1g101360 Medicago truncatula HOM05D005649 ORTHO05D006837 4.2e-15 84.7 89 49.4
Sed0025700 Sechium edule HOM05D005649 ORTHO05D006837 4.2e-15 84.7 90 48.9
Gohir.D12G260900 Gossypium hirsutum HOM05D005649 ORTHO05D006837 5.5e-15 84.3 87 52.9
Gorai.008G279600 Gossypium raimondii HOM05D005649 ORTHO05D006837 5.5e-15 84.3 87 52.9
Psat0s6119g0040 Pisum sativum HOM05D005649 ORTHO05D006837 5.5e-15 84.3 89 50.6
Duzib084G1193 Durio zibethinus HOM05D005649 ORTHO05D006837 7.2e-15 84.0 86 51.2
Nn8g41026 Nelumbo nucifera HOM05D005649 ORTHO05D006837 7.2e-15 84.0 85 49.4
PSO782G2995 Papaver somniferum HOM05D005649 ORTHO05D006837 9.4e-15 83.6 68 55.9
MELO3C006883.2 Cucumis melo HOM05D005649 ORTHO05D006837 1.2e-14 83.2 84 45.2
Lalb_Chr01g0009161 Lupinus albus HOM05D005649 ORTHO05D006837 1.2e-14 83.2 84 54.8
Cc02_g03310 Coffea canephora HOM05D005649 ORTHO05D006837 1.6e-14 82.8 88 46.6
Sp6g14410 Schrenkiella parvula HOM05D005649 ORTHO05D006837 1.6e-14 82.8 96 45.8
Nn1g01375 Nelumbo nucifera HOM05D005649 ORTHO05D006837 2.7e-14 82.0 88 47.7
PSO782G3448 Papaver somniferum HOM05D005649 ORTHO05D006837 2.7e-14 82.0 95 48.4
CARHR265080 Cardamine hirsuta HOM05D005649 ORTHO05D006837 3.6e-14 81.6 93 50.5
CsaV3_3G016880 Cucumis sativus L. HOM05D005649 ORTHO05D006837 3.6e-14 81.6 98 43.9
TWI63G0636 Tripterygium wilfordii HOM05D005649 ORTHO05D006837 3.6e-14 81.6 100 39.0
Ah.07g209060 Amaranthus hybridus HOM05D005649 ORTHO05D006837 6.1e-14 80.9 90 43.3
Phvul.004G120100 Phaseolus vulgaris HOM05D005649 ORTHO05D006837 6.1e-14 80.9 96 46.9
Sed0000609 Sechium edule HOM05D005649 ORTHO05D006837 6.1e-14 80.9 90 44.4
C09p41580 Brassica napus HOM05D005649 ORTHO05D006837 8.0e-14 80.5 87 44.8
Eucgr.K00231 Eucalyptus grandis HOM05D005649 ORTHO05D006837 8.0e-14 80.5 87 44.8
PSO478G4859 Papaver somniferum HOM05D005649 ORTHO05D006837 1.0e-13 80.1 98 48.0
THA.LOC109117151 Tarenaya hassleriana HOM05D005649 ORTHO05D006837 1.0e-13 80.1 62 58.1
TPR.G17428 Trifolium pratense HOM05D005649 ORTHO05D006837 1.0e-13 80.1 85 49.4
Lsat_1_v5_gn_2_132960 Lactuca sativa HOM05D005649 ORTHO05D006837 1.4e-13 79.7 95 45.3
BraA03t10871Z Brassica rapa HOM05D005649 ORTHO05D006837 1.8e-13 79.3 96 42.7
BcaB01g04189 Brassica carinata HOM05D005649 ORTHO05D006837 2.3e-13 79.0 96 42.7
AL8G26550 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 3.0e-13 78.6 87 49.4
BcaC01g06166 Brassica carinata HOM05D005649 ORTHO05D006837 3.0e-13 78.6 96 42.7
BcaC01g06170 Brassica carinata HOM05D005649 ORTHO05D006837 3.0e-13 78.6 96 42.7
BolC3t14245H Brassica oleracea HOM05D005649 ORTHO05D006837 3.0e-13 78.6 96 42.7
Lj2g0004156 Lotus japonicus HOM05D005649 ORTHO05D006837 3.0e-13 78.6 86 51.2
AT5G52160 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 4.0e-13 78.2 90 48.9
AT5G62080 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 4.0e-13 78.2 86 45.3
A10p09850 Brassica napus HOM05D005649 ORTHO05D006837 4.0e-13 78.2 86 45.3
BraA10t43066Z Brassica rapa HOM05D005649 ORTHO05D006837 4.0e-13 78.2 86 45.3
Thhalv10005193m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 5.2e-13 77.8 86 39.5
Thhalv10015124m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 5.2e-13 77.8 96 44.8
QL09p014765 Quercus lobata HOM05D005649 ORTHO05D006837 5.2e-13 77.8 90 46.7
BolC9t57041H Brassica oleracea HOM05D005649 ORTHO05D006837 6.8e-13 77.4 86 47.7
C03p18480 Brassica napus HOM05D005649 ORTHO05D006837 8.8e-13 77.0 74 48.6
Cpa.g.sc107.18 Carica papaya HOM05D005649 ORTHO05D006837 1.2e-12 76.6 94 40.4
AL8G38860 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 1.5e-12 76.3 89 43.8
Carub.0008s1225 Capsella rubella HOM05D005649 ORTHO05D006837 1.5e-12 76.3 63 52.4
Carub.0008s2276 Capsella rubella HOM05D005649 ORTHO05D006837 3.4e-12 75.1 92 40.2
CARHR275870 Cardamine hirsuta HOM05D005649 ORTHO05D006837 3.4e-12 75.1 90 41.1
FAN03G1726 Fragaria x ananassa HOM05D005649 ORTHO05D006837 3.4e-12 75.1 51 60.8
A03p15810 Brassica napus HOM05D005649 ORTHO05D006837 5.7e-12 74.3 97 38.1
HPP92_025369 Vanilla planifolia HOM05D005649 ORTHO05D006837 5.7e-12 74.3 66 51.5
CDE11G0782 Ceratophyllum demersum HOM05D005649 ORTHO05D006837 7.5e-12 73.9 94 41.5
HPP92_025495 Vanilla planifolia HOM05D005649 ORTHO05D006837 1.7e-11 72.8 96 43.8
ATR0757G068 Amborella trichopoda HOM05D005649 ORTHO05D006837 3.7e-11 71.6 66 50.0
Sp2g25250 Schrenkiella parvula HOM05D005649 ORTHO05D006837 4.8e-11 71.2 86 40.7
BcaB08g35564 Brassica carinata HOM05D005649 ORTHO05D006837 6.3e-11 70.9 61 49.2
Thhalv10015126m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 4.1e-10 68.2 92 37.0
Carub.0006s0617 Capsella rubella HOM05D005649 ORTHO05D006837 5.4e-10 67.8 61 49.2
Sp6g35660 Schrenkiella parvula HOM05D005649 ORTHO05D006837 5.4e-10 67.8 92 35.9
AL6G17460 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 1.6e-09 66.2 62 46.8
TAR636G3290 Trochodendron aralioides HOM05D000087 ORTHO05D000439 1.6e-09 66.2 82 45.1
Aa31LG3G8540 Aethionema arabicum HOM05D005649 ORTHO05D006837 2.0e-09 65.9 97 36.1
BcaC06g32460 Brassica carinata HOM05D005649 ORTHO05D006837 2.0e-09 65.9 84 38.1
CARHR205910 Cardamine hirsuta HOM05D005649 ORTHO05D006837 2.0e-09 65.9 61 45.9
AT5G07230 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 2.7e-09 65.5 61 47.5
A10p28990 Brassica napus HOM05D005649 ORTHO05D006837 2.7e-09 65.5 92 34.8
BraA10t44947Z Brassica rapa HOM05D005649 ORTHO05D006837 2.7e-09 65.5 92 34.8
C09p69350 Brassica napus HOM05D005649 ORTHO05D006837 3.5e-09 65.1 92 33.7
BolC9t59679H Brassica oleracea HOM05D005649 ORTHO05D006837 3.5e-09 65.1 92 33.7
Zm00001eb198610 Zea mays HOM05D005649 ORTHO05D006837 1.7e-08 62.8 94 33.0
Aa31LG2G14310 Aethionema arabicum HOM05D005649 ORTHO05D006837 3.2e-07 58.5 85 35.3
SEGI_28459 Sequoiadendron giganteum HOM05D005649 ORTHO05D006837 3.2e-07 58.5 86 36.0
PSO782G4359 Papaver somniferum HOM05D005649 ORTHO05D006837 4.2e-07 58.2 99 35.4
Zm00001eb319020 Zea mays HOM05D005649 ORTHO05D006837 9.4e-07 57.0 70 37.1
Os09g0525500 Oryza sativa ssp. japonica HOM05D005649 ORTHO05D006837 1.2e-06 56.6 88 38.6


User provided reference genes

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