Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.9e-72 275.8 147 100.0
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 1.5e-53 213.0 141 73.8
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 6.1e-50 201.1 144 68.1
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.1e-48 196.8 136 73.5
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 3.3e-48 195.3 145 69.7
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 9.7e-48 193.7 139 71.2
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 2.2e-47 192.6 146 65.1
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 6.3e-47 191.0 141 64.5
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 1.4e-46 189.9 137 70.1
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 7.0e-46 187.6 136 70.6
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 9.1e-46 187.2 139 68.3
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 9.1e-46 187.2 139 68.3
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 1.2e-45 186.8 139 68.3
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 1.5e-45 186.4 139 68.3
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 3.4e-45 185.3 139 66.9
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 3.4e-45 185.3 134 69.4
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 4.5e-45 184.9 151 63.6
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 5.9e-45 184.5 145 62.8
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.0e-44 183.7 139 66.9
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.3e-44 183.3 127 71.7
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.3e-44 183.3 146 61.0
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 2.9e-44 182.2 134 67.9
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 2.9e-44 182.2 136 66.2
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 2.9e-44 182.2 144 63.9
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.8e-44 181.8 127 71.7
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 3.8e-44 181.8 139 66.9
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 6.5e-44 181.0 136 66.9
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.4e-43 179.9 136 66.9
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 1.9e-43 179.5 147 62.6
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.9e-43 179.5 127 70.9
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 2.5e-43 179.1 127 71.7
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 2.5e-43 179.1 136 66.9
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 3.2e-43 178.7 127 70.9
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 4.2e-43 178.3 128 66.4
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 4.2e-43 178.3 141 63.8
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.5e-43 177.9 141 63.8
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 5.5e-43 177.9 143 64.3
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.2e-43 177.6 141 63.1
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 1.6e-42 176.4 132 68.9
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.7e-42 175.6 136 64.7
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 3.6e-42 175.3 126 69.8
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 4.7e-42 174.9 141 59.6
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.1e-42 174.5 136 64.0
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 8.0e-42 174.1 138 65.2
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.4e-41 173.3 136 62.5
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.4e-41 173.3 127 69.3
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.8e-41 172.9 128 66.4
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.8e-41 172.9 141 62.4
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 1.8e-41 172.9 147 60.5
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 2.3e-41 172.6 142 62.7
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.9e-41 171.8 173 53.2
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 6.7e-41 171.0 146 58.9
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 8.8e-41 170.6 150 62.7
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 8.8e-41 170.6 130 70.0
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.1e-40 170.2 140 62.9
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.5e-40 169.9 142 64.1
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 2.6e-40 169.1 128 62.5
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 3.3e-40 168.7 127 66.1
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.3e-39 166.8 136 61.8
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.3e-39 166.8 136 61.8
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 1.7e-39 166.4 127 65.4
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 2.2e-39 166.0 128 63.3
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 2.8e-39 165.6 127 65.4
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.8e-39 165.6 141 61.0
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 3.7e-39 165.2 142 59.2
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.7e-39 165.2 127 65.4
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 8.2e-39 164.1 128 62.5
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.4e-38 163.3 136 58.8
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 1.8e-38 162.9 139 58.3
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 3.1e-38 162.2 144 59.0
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 3.1e-38 162.2 142 57.0
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 5.3e-38 161.4 141 58.9
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 5.3e-38 161.4 140 58.6
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 5.3e-38 161.4 136 61.0
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 7.0e-38 161.0 136 61.8
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 2.0e-37 159.5 127 63.8
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 7.7e-37 157.5 129 60.5
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.0e-36 157.1 136 57.4
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.3e-36 156.8 127 66.9
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 2.9e-36 155.6 127 62.2
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 1.1e-35 153.7 129 59.7
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 1.5e-35 153.3 130 65.4
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 2.5e-35 152.5 128 61.7
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.2e-35 151.8 141 58.2
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 5.5e-35 151.4 141 57.4
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 7.2e-35 151.0 131 55.7
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 9.4e-35 150.6 130 60.0
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 1.6e-34 149.8 130 60.8
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 3.6e-34 148.7 128 60.2
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 4.7e-34 148.3 130 60.8
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 8.0e-34 147.5 130 59.2
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 8.0e-34 147.5 136 56.6
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 6.7e-33 144.4 128 58.6
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 6.7e-33 144.4 128 58.6
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 6.7e-33 144.4 128 58.6
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 8.8e-33 144.1 128 59.4
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 1.5e-32 143.3 130 56.9
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.5e-32 143.3 128 58.6
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 7.5e-32 141.0 130 57.7
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 2.8e-31 139.0 155 49.7
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 4.1e-30 135.2 150 50.0
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 9.4e-27 124.0 127 55.9
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.2e-26 123.6 74 77.0
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 3.6e-26 122.1 141 47.5
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 6.8e-25 117.9 138 46.4
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 8.8e-25 117.5 134 47.0
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.2e-24 117.1 148 46.6
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 4.8e-23 111.7 71 71.8
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.5e-21 105.5 57 82.5
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 4.4e-16 88.6 86 55.8
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 6.3e-15 84.7 50 72.0
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.4e-14 82.8 148 33.8
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 5.0e-12 75.1 119 37.8
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.1e-11 73.9 87 51.7
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.6e-10 70.1 110 39.1


User provided reference genes

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