Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 0.0e+00 1088.6 564 100.0
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 1.2e-226 790.0 567 75.1
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 2.0e-194 682.9 568 66.0
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 7.7e-186 654.4 545 64.0
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 3.6e-183 645.6 582 59.8
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 2.3e-182 642.9 566 61.1
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.8e-180 636.0 567 61.9
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 2.8e-180 636.0 566 61.0
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 1.6e-178 630.2 571 61.5
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 1.6e-178 630.2 574 59.8
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 1.0e-177 627.5 567 60.7
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 7.2e-176 621.3 569 59.8
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 9.4e-176 620.9 575 59.3
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 8.0e-175 617.8 568 59.5
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 8.0e-175 617.8 570 59.6
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 5.2e-174 615.1 570 59.6
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 8.8e-174 614.4 588 59.9
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 1.5e-173 613.6 519 62.6
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 2.0e-173 613.2 583 59.7
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 3.4e-173 612.5 577 59.1
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 3.4e-173 612.5 473 68.3
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 1.7e-172 610.1 562 60.1
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 1.7e-172 610.1 552 62.1
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 2.8e-172 609.4 570 59.5
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 3.1e-171 605.9 473 67.7
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 5.9e-170 601.7 567 58.2
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 5.9e-170 601.7 473 67.0
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 7.7e-170 601.3 565 58.4
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 1.3e-169 600.5 473 67.0
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 1.7e-169 600.1 469 67.6
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 5.0e-169 598.6 482 66.2
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 1.9e-168 596.7 553 60.4
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 3.3e-168 595.9 561 57.9
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 7.2e-168 594.7 483 65.4
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 2.8e-167 592.8 472 64.6
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 8.0e-167 591.3 450 66.9
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 3.0e-166 589.3 559 58.1
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 4.0e-166 589.0 471 66.7
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 4.0e-166 589.0 430 70.5
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 4.0e-166 589.0 574 57.8
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 1.2e-165 587.4 553 58.8
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 3.7e-164 582.4 564 58.5
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 9.2e-163 577.8 565 57.3
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 2.7e-162 576.2 570 56.0
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 2.7e-162 576.2 604 55.0
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 7.8e-162 574.7 520 58.5
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 5.0e-161 572.0 559 56.9
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 1.1e-160 570.9 564 57.6
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 2.5e-160 569.7 573 55.0
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 3.3e-160 569.3 547 58.5
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 4.3e-160 568.9 561 56.1
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 5.6e-160 568.5 458 63.1
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 7.3e-160 568.2 562 56.8
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 9.5e-160 567.8 572 56.5
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 1.2e-159 567.4 566 57.1
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.1e-159 566.6 475 62.5
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 2.1e-159 566.6 464 62.7
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 2.1e-159 566.6 562 56.4
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 2.3e-158 563.1 469 62.0
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 2.0e-157 560.1 564 55.9
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.0e-157 560.1 475 61.9
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.4e-157 559.3 540 57.4
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.4e-157 558.9 539 57.5
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 9.8e-157 557.8 540 57.2
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 4.9e-156 555.4 441 64.2
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 1.9e-155 553.5 557 59.1
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 4.1e-155 552.4 561 55.4
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 5.4e-155 552.0 561 55.3
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 5.4e-155 552.0 577 54.1
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.4e-155 552.0 553 56.6
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 5.4e-155 552.0 468 61.1
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 9.2e-155 551.2 561 55.3
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 2.7e-154 549.7 546 55.9
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 1.7e-153 547.0 575 54.3
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.0e-153 546.2 547 55.2
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 6.6e-153 545.0 561 54.9
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 1.1e-152 544.3 561 54.9
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 3.3e-152 542.7 564 55.5
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 4.3e-152 542.3 535 56.3
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 9.5e-152 541.2 550 55.3
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 1.2e-151 540.8 418 65.6
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 6.2e-151 538.5 560 55.4
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 8.0e-151 538.1 562 54.3
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 8.0e-151 538.1 563 53.8
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 4.0e-150 535.8 451 61.0
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 4.0e-150 535.8 587 53.3
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 5.2e-150 535.4 576 53.0
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 2.6e-149 533.1 565 54.5
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 9.8e-149 531.2 594 52.5
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 3.7e-148 529.3 468 61.5
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 2.3e-145 520.0 435 60.2
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 6.6e-145 518.5 447 59.5
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 3.3e-144 516.2 566 52.1
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 7.3e-144 515.0 580 51.6
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 1.5e-141 507.3 531 52.7
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 6.4e-140 501.9 552 52.7
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 3.5e-138 496.1 552 52.7
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 7.8e-138 495.0 457 58.2
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 2.5e-136 490.0 693 45.2
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.5e-133 480.7 538 50.2
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 3.5e-130 469.5 531 49.9
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 4.3e-128 462.6 383 63.2
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 4.3e-128 462.6 273 79.1
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 1.8e-126 457.2 450 55.6
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 2.9e-124 449.9 413 56.4
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 4.9e-124 449.1 366 64.8
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 5.4e-123 445.7 467 50.7
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 1.1e-110 404.8 430 54.0
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 3.1e-94 350.1 475 48.0
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 5.3e-94 349.4 259 70.7
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 2.0e-93 347.4 330 57.6
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 8.8e-89 332.0 377 47.7
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 1.3e-87 328.2 553 40.0
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 6.3e-87 325.9 235 64.3
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 1.5e-67 261.5 471 36.3
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.3e-65 254.2 243 58.4
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 4.4e-64 250.0 294 48.6
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 1.1e-62 245.4 457 34.1
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 4.4e-56 223.4 465 31.6
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 1.6e-42 178.3 256 43.0
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 3.3e-35 154.1 120 60.8
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-31 141.7 95 74.7
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 1.9e-30 138.3 204 33.3
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 1.2e-29 135.6 245 37.6
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 6.4e-23 113.2 62 79.0
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 1.6e-21 108.6 80 61.2
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 6.0e-21 106.7 175 40.6
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 6.4e-15 86.7 81 54.3
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.0e-12 79.3 147 45.6
Aqoxy1G04253 Aquilegia oxysepala HOM05D006127 ORTHO05D078839 5.4e-06 57.0 49 61.2


User provided reference genes

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