Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00264 Erythranthe guttata HOM05D006306 ORTHO05D007912 8.3e-171 603.6 299 100.0
MSTRG.27066 Avicennia marina HOM05D006306 ORTHO05D007912 6.7e-96 354.8 305 62.0
SalBow4G0206 Salvia bowleyana HOM05D006306 ORTHO05D007912 7.0e-77 291.6 267 58.4
SGA_v2.0_scaffold192G40609 Striga asiatica HOM05D006306 ORTHO05D007912 1.5e-76 290.4 295 53.2
CSS0007539 Camellia sinensis var. sinensis HOM05D006306 ORTHO05D007912 4.5e-68 262.3 297 47.1
Lj1A1009G47 Lonicera japonica HOM05D006306 ORTHO05D007912 1.6e-65 253.8 306 47.4
Peaxi162Scf00057g00026 Petunia axillaris HOM05D006306 ORTHO05D007912 8.0e-65 251.5 290 46.9
GSVIVG01028794001 Vitis vinifera HOM05D006306 ORTHO05D007912 1.0e-64 251.1 293 46.8
unitig_92.g28262 Utricularia gibba HOM05D006306 ORTHO05D001071 2.3e-64 250.0 300 47.0
COL.COLO4_30262 Corchorus olitorius HOM05D006306 ORTHO05D007912 8.8e-64 248.1 293 46.8
Cc02_g02170 Coffea canephora HOM05D006306 ORTHO05D007912 2.6e-63 246.5 286 46.9
PGSC0003DMG400019962 Solanum tuberosum HOM05D006306 ORTHO05D007912 2.6e-63 246.5 294 45.2
MD01G1211200 Malus domestica HOM05D006306 ORTHO05D007912 7.5e-63 245.0 291 46.0
CiPaw.06G005500 Carya illinoinensis HOM05D006306 ORTHO05D007912 1.3e-62 244.2 293 44.7
RhsimUnG0097700 Rhododendron simsii HOM05D006306 ORTHO05D007912 1.7e-62 243.8 298 44.0
Rhsim03G0195700 Rhododendron simsii HOM05D006306 ORTHO05D007912 2.8e-62 243.0 298 45.0
Sopen03g003670 Solanum pennellii HOM05D006306 ORTHO05D007912 3.7e-62 242.7 295 45.4
Atru.chr1.326 Acer truncatum HOM05D006306 ORTHO05D007912 4.8e-62 242.3 289 45.3
Solyc03g007750.3 Solanum lycopersicum HOM05D006306 ORTHO05D007912 6.3e-62 241.9 295 45.8
Lsat_1_v5_gn_8_6341 Lactuca sativa HOM05D006306 ORTHO05D007912 1.1e-61 241.1 285 46.3
Nitab4.5_0001748g0060 Nicotiana tabacum HOM05D006306 ORTHO05D007912 3.1e-61 239.6 291 46.4
Nitab4.5_0008026g0020 Nicotiana tabacum HOM05D006306 ORTHO05D007912 3.1e-61 239.6 299 45.8
TAR636G3656 Trochodendron aralioides HOM05D006306 ORTHO05D007912 5.3e-61 238.8 301 45.2
Hma1.2p1_0142F.1_g064400 Hydrangea macrophylla HOM05D006306 ORTHO05D007912 9.1e-61 238.0 292 45.9
Gorai.008G272800 Gossypium raimondii HOM05D006306 ORTHO05D007912 1.2e-60 237.7 290 46.9
Prupe.2G303600 Prunus persica HOM05D006306 ORTHO05D007912 1.6e-60 237.3 288 44.8
MBI06_g33547_MAGBIO Magnolia biondii HOM05D006306 ORTHO05D007912 2.0e-60 236.9 294 43.9
Psat6g195200 Pisum sativum HOM05D006306 ORTHO05D007912 4.5e-60 235.7 285 43.9
Ciclev10005526m.g Citrus clementina HOM05D006306 ORTHO05D007912 5.9e-60 235.3 291 44.0
Ca_10706_v3 Cicer arietinum L. HOM05D006306 ORTHO05D007912 1.3e-59 234.2 287 42.2
HanXRQChr05g0141161 Helianthus annuus HOM05D006306 ORTHO05D007912 1.3e-59 234.2 292 45.9
Cfa016324 Carpinus fangiana HOM05D006306 ORTHO05D007912 3.8e-59 232.6 295 44.4
Glyma.10G229500 Glycine max HOM05D006306 ORTHO05D007912 1.9e-58 230.3 285 43.9
CAN.G926.4 Capsicum annuum HOM05D006306 ORTHO05D007912 2.5e-58 229.9 298 43.6
Duzib084G0050 Durio zibethinus HOM05D006306 ORTHO05D007912 2.5e-58 229.9 303 43.9
TWI39G0038 Tripterygium wilfordii HOM05D006306 ORTHO05D007912 7.2e-58 228.4 290 40.0
CANSAT21G1468 Cannabis sativa HOM05D006306 ORTHO05D007912 2.7e-57 226.5 294 40.8
VMungo0720G2617 Vigna mungo HOM05D006306 ORTHO05D007912 2.7e-57 226.5 283 43.1
Hund11704 Selenicereus undatus HOM05D006306 ORTHO05D007912 8.0e-57 224.9 286 44.8
Aqoxy5G04066 Aquilegia oxysepala HOM05D006306 ORTHO05D007912 1.0e-56 224.6 290 45.9
PGR142G3937 Punica granatum HOM05D006306 ORTHO05D007912 1.4e-56 224.2 289 42.6
Potri.012G035500 Populus trichocarpa HOM05D006306 ORTHO05D007912 4.0e-56 222.6 288 44.8
Sc19g0001030 Simmondsia chinensis HOM05D006306 ORTHO05D007912 6.8e-56 221.9 292 42.5
PSO170G4684 Papaver somniferum HOM05D006306 ORTHO05D007912 1.2e-55 221.1 294 42.2
Cpa.g.sc3.9 Carica papaya HOM05D006306 ORTHO05D007912 1.5e-55 220.7 295 43.7
ATR1131G020 Amborella trichopoda HOM05D006306 ORTHO05D007912 2.6e-55 219.9 298 42.3
Eucgr.K00302 Eucalyptus grandis HOM05D006306 ORTHO05D007912 3.4e-55 219.5 294 42.2
AUR62021081 Chenopodium quinoa HOM05D006306 ORTHO05D007912 9.8e-55 218.0 289 42.6
Gohir.A12G254499 Gossypium hirsutum HOM05D006306 ORTHO05D007912 9.8e-55 218.0 286 44.4
RcHm_v2.0_Chr1g0379511 Rosa chinensis HOM05D006306 ORTHO05D007912 1.3e-54 217.6 288 42.7
Lj5g0016065 Lotus japonicus HOM05D006306 ORTHO05D007912 1.7e-54 217.2 293 39.6
Sed0005488 Sechium edule HOM05D006306 ORTHO05D007912 2.2e-54 216.9 284 42.6
THA.LOC104825120 Tarenaya hassleriana HOM05D006306 ORTHO05D007912 2.8e-54 216.5 286 45.1
PSO063G5557 Papaver somniferum HOM05D006306 ORTHO05D007912 4.8e-54 215.7 294 41.8
QL09p012095 Quercus lobata HOM05D006306 ORTHO05D007912 6.3e-54 215.3 298 41.9
Sabra12G0024000 Salix brachista HOM05D006306 ORTHO05D007912 1.1e-53 214.5 287 43.6
arahy.Tifrunner.gnm1.ann1.FS5X82 Arachis hypogaea HOM05D006306 ORTHO05D007912 1.4e-53 214.2 291 41.2
FAN10G3235 Fragaria x ananassa HOM05D006306 ORTHO05D007912 1.4e-53 214.2 296 42.2
FAN06G4689 Fragaria x ananassa HOM05D006306 ORTHO05D007912 2.4e-53 213.4 296 42.2
FAN06G4805 Fragaria x ananassa HOM05D006306 ORTHO05D007912 2.4e-53 213.4 296 42.6
FvH4_7g30600 Fragaria vesca HOM05D006306 ORTHO05D007912 3.1e-53 213.0 289 42.6
arahy.Tifrunner.gnm1.ann1.U1BTLB Arachis hypogaea HOM05D006306 ORTHO05D007912 4.1e-53 212.6 290 41.7
FAN01G1106 Fragaria x ananassa HOM05D006306 ORTHO05D007912 2.7e-52 209.9 296 41.6
BcaB08g35641 Brassica carinata HOM05D006306 ORTHO05D007912 4.5e-52 209.1 281 43.1
ClCG01G000830 Citrullus lanatus HOM05D006306 ORTHO05D007912 1.0e-51 208.0 286 41.6
Carub.0008s1304 Capsella rubella HOM05D006306 ORTHO05D007912 1.7e-51 207.2 283 42.8
BcaC04g20532 Brassica carinata HOM05D006306 ORTHO05D007912 1.1e-50 204.5 283 43.1
BolC9t57127H Brassica oleracea HOM05D006306 ORTHO05D007912 1.9e-50 203.8 283 43.1
CsaV3_5G000970 Cucumis sativus L. HOM05D006306 ORTHO05D007912 4.2e-50 202.6 289 41.2
Medtr1g099490 Medicago truncatula HOM05D006306 ORTHO05D007912 4.2e-50 202.6 326 36.5
Phvul.007G076000 Phaseolus vulgaris HOM05D006306 ORTHO05D007912 7.2e-50 201.8 282 38.7
FAN10G1990 Fragaria x ananassa HOM05D006306 ORTHO05D007912 6.1e-49 198.7 328 37.5
Haze_00077 Corylus avellana HOM05D000147 ORTHO05D002016 4.0e-48 196.1 290 39.7
AT5G52880 Arabidopsis thaliana HOM05D006306 ORTHO05D007912 8.9e-48 194.9 283 42.0
CDE08G0346 Ceratophyllum demersum HOM05D006306 ORTHO05D007912 8.9e-48 194.9 265 42.3
AL8G27340 Arabidopsis lyrata HOM05D006306 ORTHO05D007912 2.0e-47 193.7 282 41.1
Lalb_Chr02g0141321 Lupinus albus HOM05D006306 ORTHO05D007912 2.0e-47 193.7 230 45.2
vmacro06599 Vaccinium macrocarpon HOM05D006306 ORTHO05D007912 1.4e-45 187.6 334 36.5
Aa31LG3G9130 Aethionema arabicum HOM05D006306 ORTHO05D007912 2.3e-43 180.3 281 40.2
HPP92_009775 Vanilla planifolia HOM05D006306 ORTHO05D007912 2.3e-43 180.3 287 36.2
ECA233G3199 Erigeron canadensis HOM05D006306 ORTHO05D007912 2.9e-43 179.9 238 46.2
Gohir.D12G255200 Gossypium hirsutum HOM05D006306 ORTHO05D007912 5.6e-42 175.6 203 49.8
Manes.06G154300 Manihot esculenta HOM05D006306 ORTHO05D007912 7.3e-42 175.3 213 47.4
AagrBONN_evm.TU.Sc2ySwM_228.2460 Anthoceros agrestis HOM05D006306 ORTHO05D007912 6.1e-41 172.2 307 34.2
MBI17_g41518_MAGBIO Magnolia biondii HOM05D006306 ORTHO05D007912 1.4e-40 171.0 284 39.8
Thhalv10014697m.g Eutrema salsugineum HOM05D006306 ORTHO05D007912 1.3e-38 164.5 223 40.8
AUR62031450 Chenopodium quinoa HOM05D006306 ORTHO05D007912 2.2e-38 163.7 227 42.7
DCAR_020289 Daucus carota HOM05D006306 ORTHO05D007912 2.2e-38 163.7 193 47.2
Thecc.03G188100 Theobroma cacao HOM05D006306 ORTHO05D007912 2.2e-38 163.7 199 45.7
CARHR265820 Cardamine hirsuta HOM05D006306 ORTHO05D007912 1.1e-37 161.4 221 41.2
Zm00001eb293490 Zea mays HOM05D006306 ORTHO05D007912 7.0e-37 158.7 196 44.9
RcHm_v2.0_Chr1g0379281 Rosa chinensis HOM05D006306 ORTHO05D007912 3.5e-36 156.4 144 55.6
Hma1.2p1_0142F.1_g064410 Hydrangea macrophylla HOM05D006306 ORTHO05D007912 6.0e-36 155.6 197 44.7
C09p42490 Brassica napus HOM05D006306 ORTHO05D007912 1.0e-35 154.8 226 42.0
BcaC04g20531 Brassica carinata HOM05D006306 ORTHO05D007912 3.9e-35 152.9 241 40.2
Nn1g01725 Nelumbo nucifera HOM05D006306 ORTHO05D007912 2.8e-33 146.7 285 32.6
BolC9t57131H Brassica oleracea HOM05D006306 ORTHO05D007912 6.2e-33 145.6 193 44.6
TPR.G7772 Trifolium pratense HOM05D006306 ORTHO05D007912 1.4e-32 144.4 218 37.2
BcaB08g35646 Brassica carinata HOM05D006306 ORTHO05D007912 1.3e-30 137.9 265 37.4
AagrBONN_evm.TU.Sc2ySwM_117.3502 Anthoceros agrestis HOM05D006306 ORTHO05D007912 2.9e-30 136.7 297 31.6
Pp3c4_17520 Physcomitrium patens HOM05D006306 ORTHO05D007912 2.9e-30 136.7 282 33.3
Sp6g15040 Schrenkiella parvula HOM05D006306 ORTHO05D007912 4.1e-29 132.9 296 30.7
Aa31LG3G9120 Aethionema arabicum HOM05D006306 ORTHO05D007912 3.5e-28 129.8 211 37.4
Os05g0526300 Oryza sativa ssp. japonica HOM05D006306 ORTHO05D007912 4.3e-26 122.9 137 48.9
RcHm_v2.0_Chr1g0379501 Rosa chinensis HOM05D006306 ORTHO05D007912 4.0e-24 116.3 212 33.0
Ah.13g069400 Amaranthus hybridus HOM05D006306 ORTHO05D007912 2.6e-23 113.6 109 57.8
CAN.G926.5 Capsicum annuum HOM05D006306 ORTHO05D007912 5.8e-23 112.5 197 34.5
CBR_g45678 Chara braunii HOM05D006306 ORTHO05D007912 5.8e-23 112.5 342 26.6
TPR.G10934 Trifolium pratense HOM05D006306 ORTHO05D007912 3.7e-22 109.8 93 58.1
C09p42540 Brassica napus HOM05D006306 ORTHO05D007912 2.1e-20 104.0 138 45.7
MELO3C034012.2 Cucumis melo HOM05D006306 ORTHO05D007912 3.5e-20 103.2 212 33.0
Ah.13g069420 Amaranthus hybridus HOM05D006306 ORTHO05D007912 4.6e-20 102.8 122 50.8
MBI12_g17737_MAGBIO Magnolia biondii HOM05D006306 ORTHO05D007912 1.0e-19 101.7 106 50.0
RcHm_v2.0_Chr1g0378761 Rosa chinensis HOM05D006306 ORTHO05D007912 1.7e-19 100.9 90 56.7
A10p10330 Brassica napus HOM05D006306 ORTHO05D007912 3.9e-19 99.8 110 50.9
CSS0035371 Camellia sinensis var. sinensis HOM05D006306 ORTHO05D007912 5.1e-19 99.4 143 39.2
Pp3c3_15840 Physcomitrium patens HOM05D006306 ORTHO05D007912 1.5e-18 97.8 305 28.9
Dinv28363 Davidia involucrata HOM05D000147 ORTHO05D002016 5.2e-16 89.4 74 63.5
SMO325G0002 Selaginella moellendorffii HOM05D006584 ORTHO05D007640 6.4e-14 82.4 185 28.6
ClCG04G002190 Citrullus lanatus HOM05D006306 ORTHO05D007912 8.4e-14 82.0 81 56.8
ClCG04G002620 Citrullus lanatus HOM05D006306 ORTHO05D007912 8.4e-14 82.0 81 56.8
COL.COLO4_02740 Corchorus olitorius HOM05D006306 ORTHO05D007912 9.6e-10 68.6 57 54.4
Prupe.2G304000 Prunus persica HOM05D006306 ORTHO05D007912 1.3e-09 68.2 60 55.0
Prupe.2G291600 Prunus persica HOM05D006306 ORTHO05D007912 3.6e-09 66.6 60 53.3
RcHm_v2.0_Chr1g0379101 Rosa chinensis HOM05D006306 ORTHO05D007912 1.8e-08 64.3 48 60.4
CSS0044760 Camellia sinensis var. sinensis HOM05D006306 ORTHO05D007912 1.7e-06 57.8 57 49.1


User provided reference genes

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