Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 8.9e-160 567.0 311 100.0
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.4e-104 383.6 313 65.2
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 9.1e-104 380.9 308 65.9
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.5e-103 380.2 313 64.5
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 3.4e-103 379.0 308 65.6
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 7.7e-103 377.9 313 64.2
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.7e-103 377.9 313 64.2
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.0e-102 377.5 309 64.7
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.3e-102 377.1 309 64.7
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 5.0e-102 375.2 309 65.7
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.9e-101 373.2 312 64.4
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 5.5e-101 371.7 309 65.0
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 2.1e-100 369.8 311 65.0
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 7.9e-100 367.9 312 63.8
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 3.9e-99 365.5 309 63.1
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.1e-98 364.0 312 64.7
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 2.6e-98 362.8 311 66.2
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 3.3e-98 362.5 309 66.0
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 4.4e-98 362.1 311 67.2
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 7.4e-98 361.3 311 63.3
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 9.7e-98 360.9 311 63.0
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 8.2e-97 357.8 253 74.3
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 2.4e-96 356.3 311 64.0
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 3.1e-96 355.9 323 60.4
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 3.1e-96 355.9 312 62.2
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.2e-95 354.0 309 60.8
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.0e-95 353.2 309 63.4
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.6e-95 352.8 311 61.1
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.9e-95 351.7 350 59.1
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 1.3e-94 350.5 322 61.5
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 5.0e-94 348.6 312 61.5
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 8.5e-94 347.8 311 62.4
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 1.1e-93 347.4 310 60.6
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 2.7e-92 342.8 307 57.3
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 6.1e-92 341.7 311 64.0
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 8.0e-92 341.3 313 59.4
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 1.4e-91 340.5 311 61.1
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 3.0e-91 339.3 311 61.1
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 3.0e-91 339.3 309 62.1
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.9e-91 339.0 311 59.5
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 8.8e-91 337.8 308 59.7
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.5e-90 337.0 311 60.1
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 1.5e-90 337.0 310 58.1
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.6e-90 336.3 311 59.5
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 2.6e-90 336.3 311 64.0
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.3e-90 335.9 311 58.5
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 7.4e-90 334.7 311 58.8
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.8e-89 332.8 310 58.1
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.8e-89 332.8 310 58.1
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 1.4e-88 330.5 310 57.4
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.4e-88 330.5 310 56.5
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.4e-88 330.5 259 64.9
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.4e-88 330.5 311 59.8
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.8e-88 330.1 318 57.9
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 2.4e-88 329.7 311 58.2
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 3.1e-88 329.3 313 57.8
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 9.1e-88 327.8 313 57.8
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.6e-87 327.0 318 56.0
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 4.5e-87 325.5 311 58.8
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 7.7e-87 324.7 319 59.2
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 1.3e-86 323.9 317 56.5
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 1.3e-86 323.9 316 57.0
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 2.2e-86 323.2 318 56.6
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 2.2e-86 323.2 318 56.6
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 2.2e-86 323.2 318 56.6
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 2.2e-86 323.2 318 56.6
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 6.5e-86 321.6 309 62.5
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.5e-85 320.5 307 58.3
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.5e-85 320.5 311 59.5
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.9e-85 320.1 318 55.7
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 9.4e-85 317.8 316 55.1
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.2e-84 317.4 314 56.7
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 1.6e-84 317.0 318 54.1
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.6e-84 317.0 314 54.1
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.6e-84 317.0 314 53.8
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 6.1e-84 315.1 313 57.5
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.8e-83 313.5 319 55.5
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 5.2e-83 312.0 311 59.2
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 7.5e-82 308.1 312 58.0
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 1.7e-81 307.0 317 54.6
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 3.1e-80 302.8 257 61.1
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 7.0e-80 301.6 309 57.3
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 1.6e-79 300.4 312 55.8
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 2.5e-77 293.1 261 59.0
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 2.5e-77 293.1 308 51.6
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 3.2e-77 292.7 300 54.7
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 2.7e-76 289.7 203 73.4
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 2.7e-76 289.7 313 55.0
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 4.7e-76 288.9 311 57.6
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 4.7e-76 288.9 310 51.9
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 2.0e-74 283.5 316 55.1
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.9e-73 278.9 206 70.9
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 1.8e-72 276.9 310 54.8
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 6.6e-70 268.5 314 52.2
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.5e-69 265.4 260 56.5
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 7.2e-69 265.0 311 50.8
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 7.0e-64 248.4 277 50.5
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.2e-63 247.7 311 47.6
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 3.6e-60 236.1 312 47.4
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.0e-59 234.6 249 54.2
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 1.4e-59 234.2 283 49.5
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 5.4e-56 222.2 235 53.6
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.5e-50 204.1 314 42.7
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 3.1e-43 179.9 257 42.8
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 8.9e-43 178.3 134 70.9
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 8.9e-43 178.3 190 57.9
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 2.9e-41 173.3 273 43.6
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 3.7e-41 172.9 119 76.5
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 8.3e-41 171.8 210 52.4
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.1e-40 171.4 293 40.6
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.9e-40 170.6 279 43.0
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 9.2e-40 168.3 259 40.2
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 8.6e-38 161.8 285 39.3
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 6.2e-36 155.6 314 37.9
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.1e-35 154.8 267 40.1
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.2e-31 141.4 112 70.5
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 2.1e-31 140.6 147 54.4
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 6.0e-31 139.0 119 62.2
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 1.5e-29 134.4 194 42.3
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.3e-29 133.3 175 46.3
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.6e-28 131.0 175 45.7
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 8.1e-28 128.6 313 33.2
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.4e-24 117.9 159 47.8
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.4e-24 117.1 120 57.5
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 1.3e-22 111.3 124 47.6
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 6.9e-19 99.0 137 43.8
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.1e-16 91.7 107 50.5
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 9.3e-16 88.6 100 49.0
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.7e-15 87.0 140 40.0
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 4.6e-15 86.3 107 57.9
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.3e-09 68.2 105 46.7


User provided reference genes

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