Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00208 Erythranthe guttata HOM05D001081 ORTHO05D004708 1.3e-96 356.3 173 100.0
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 7.6e-52 207.6 173 57.2
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.7e-35 153.3 167 51.5
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 5.0e-35 151.8 165 52.1
Hma1.2p1_0404F.1_g145340 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 1.2e-33 147.1 166 50.6
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 1.6e-33 146.7 170 47.1
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 2.7e-33 146.0 164 49.4
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 2.7e-33 146.0 164 49.4
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 4.7e-33 145.2 171 49.1
Solyc03g083120.3 Solanum lycopersicum HOM05D001081 ORTHO05D024756 7.9e-33 144.4 173 45.1
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 3.0e-32 142.5 172 44.8
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 1.5e-31 140.2 173 45.7
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 3.7e-30 135.6 169 43.2
Cc02_g01510 Coffea canephora HOM05D001081 ORTHO05D004708 1.4e-29 133.7 173 45.7
Nitab4.5_0006933g0040 Nicotiana tabacum HOM05D001081 ORTHO05D004708 4.1e-29 132.1 168 45.2
Hma1.2p1_0404F.1_g145380 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 7.7e-28 127.9 132 50.0
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 5.0e-27 125.2 160 42.5
Peaxi162Scf00740g00140 Petunia axillaris HOM05D001081 ORTHO05D024756 2.5e-26 122.9 171 42.7
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 9.4e-26 120.9 132 47.7
Cpa.g.sc3.91 Carica papaya HOM05D001081 ORTHO05D004708 1.2e-25 120.6 157 42.7
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 1.2e-25 120.6 171 41.5
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 1.6e-25 120.2 135 45.9
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 1.6e-25 120.2 155 43.9
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 2.1e-25 119.8 132 45.5
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 2.7e-25 119.4 131 49.6
CANSAT21G2573 Cannabis sativa HOM05D001081 ORTHO05D004708 3.6e-25 119.0 158 44.9
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 3.6e-25 119.0 132 45.5
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 3.0e-24 115.9 158 44.3
Ca_12791_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 5.2e-24 115.2 132 45.5
Glyma.17G128700 Glycine max HOM05D001081 ORTHO05D004708 5.2e-24 115.2 136 44.1
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 1.1e-23 114.0 136 44.9
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 1.1e-23 114.0 136 44.9
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 2.0e-23 113.2 136 44.1
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 2.0e-23 113.2 155 43.9
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 4.4e-23 112.1 170 40.6
Sabra15G0067900 Salix brachista HOM05D001081 ORTHO05D004708 5.7e-23 111.7 133 42.1
Sabra15G0068100 Salix brachista HOM05D001081 ORTHO05D004708 5.7e-23 111.7 133 42.1
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 5.7e-23 111.7 97 55.7
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 1.3e-22 110.5 132 44.7
FvH4_7g31511 Fragaria vesca HOM05D001081 ORTHO05D004708 1.7e-22 110.2 132 47.7
Carub.0006s2204 Capsella rubella HOM05D001081 ORTHO05D024756 2.2e-22 109.8 152 41.4
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 2.8e-22 109.4 131 48.1
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 3.7e-22 109.0 131 47.3
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 4.8e-22 108.6 136 43.4
Prupe.2G309600 Prunus persica HOM05D001081 ORTHO05D004708 6.3e-22 108.2 136 44.1
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 8.2e-22 107.8 141 41.1
Eucgr.G00143 Eucalyptus grandis HOM05D001081 ORTHO05D004708 8.2e-22 107.8 163 39.9
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 1.1e-21 107.5 130 42.3
TWI39G0245 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 1.4e-21 107.1 131 44.3
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 3.1e-21 105.9 136 43.4
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 3.1e-21 105.9 136 43.4
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 3.1e-21 105.9 136 43.4
CANSAT21G1825 Cannabis sativa HOM05D001081 ORTHO05D004708 3.1e-21 105.9 157 39.5
PSO170G6091 Papaver somniferum HOM05D001081 ORTHO05D004708 4.1e-21 105.5 151 39.1
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 7.0e-21 104.8 163 39.9
PSO063G4550 Papaver somniferum HOM05D001081 ORTHO05D004708 3.5e-20 102.4 151 38.4
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 3.5e-20 102.4 131 41.2
Medtr1g007950 Medicago truncatula HOM05D001081 ORTHO05D004708 4.5e-20 102.1 134 45.5
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 7.7e-20 101.3 132 41.7
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 7.7e-20 101.3 136 41.2
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 7.7e-20 101.3 137 40.1
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 1.0e-19 100.9 136 41.2
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 1.0e-19 100.9 136 38.2
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.3e-19 100.5 138 39.9
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 1.7e-19 100.1 159 42.8
ATR0602G075 Amborella trichopoda HOM05D001081 ORTHO05D004708 2.2e-19 99.8 156 39.1
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 3.8e-19 99.0 136 41.2
AUR62019407 Chenopodium quinoa HOM05D001081 ORTHO05D004708 3.8e-19 99.0 133 43.6
RcHm_v2.0_Chr1g0381531 Rosa chinensis HOM05D001081 ORTHO05D004708 3.8e-19 99.0 131 44.3
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 5.0e-19 98.6 137 38.0
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 6.5e-19 98.2 136 41.2
BcaNung01219 Brassica carinata HOM05D001081 ORTHO05D004708 6.5e-19 98.2 132 40.2
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 6.5e-19 98.2 132 40.2
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 6.5e-19 98.2 132 40.2
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 2.5e-18 96.3 136 39.0
Eucgr.G00111 Eucalyptus grandis HOM05D001081 ORTHO05D004708 5.5e-18 95.1 141 39.7
Eucgr.G00092 Eucalyptus grandis HOM05D001081 ORTHO05D004708 7.2e-18 94.7 162 37.7
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 7.2e-18 94.7 147 36.7
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 7.2e-18 94.7 137 38.7
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 1.2e-17 94.0 142 42.3
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 1.6e-17 93.6 175 36.6
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 3.6e-17 92.4 174 33.9
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 3.6e-17 92.4 132 39.4
Eucgr.H05016 Eucalyptus grandis HOM05D001081 ORTHO05D004708 3.6e-17 92.4 162 37.7
MD07G1288100 Malus domestica HOM05D001081 ORTHO05D004708 1.8e-16 90.1 121 40.5
CARHR189250 Cardamine hirsuta HOM05D001081 ORTHO05D004708 4.4e-15 85.5 130 35.4
HanXRQChr08g0225301 Helianthus annuus HOM05D001081 ORTHO05D004708 4.4e-15 85.5 135 37.0
SEGI_15117 Sequoiadendron giganteum HOM05D001081 ORTHO05D004708 8.3e-14 81.3 170 34.7
CARHR189240 Cardamine hirsuta HOM05D001081 ORTHO05D004708 5.9e-12 75.1 131 35.1
SalBow4G1120 Salvia bowleyana HOM05D001081 ORTHO05D004708 1.0e-11 74.3 39 87.2
HanXRQChr08g0225291 Helianthus annuus HOM05D001081 ORTHO05D004708 2.9e-11 72.8 131 35.1
SGA_v2.0_scaffold9G04846 Striga asiatica HOM05D001081 ORTHO05D004708 6.5e-11 71.6 43 79.1
HanXRQChr08g0225341 Helianthus annuus HOM05D001081 ORTHO05D004708 2.5e-10 69.7 131 33.6
AUR62006087 Chenopodium quinoa HOM05D001081 ORTHO05D004708 2.1e-09 66.6 194 28.9
Mapoly0076s0015 Marchantia polymorpha HOM05D001081 ORTHO05D004708 5.2e-08 62.0 140 32.9
FAN01G0187 Fragaria x ananassa HOM05D001081 ORTHO05D004708 9.8e-07 57.8 31 83.9
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 2.8e-06 56.2 31 80.6
Aqoxy4G01594 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 3.7e-06 55.8 42 64.3
FAN06G1778 Fragaria x ananassa HOM05D001081 ORTHO05D004708 8.3e-06 54.7 28 89.3
FAN06G3553 Fragaria x ananassa HOM05D001081 ORTHO05D004708 8.3e-06 54.7 28 89.3


User provided reference genes

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