Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 8.2e-163 577.0 295 100.0
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 2.5e-143 512.3 295 88.1
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 3.7e-139 498.4 295 84.7
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 4.5e-137 491.5 295 84.1
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 2.9e-136 488.8 295 83.4
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 8.5e-136 487.3 295 83.1
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 2.7e-134 482.3 295 81.4
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 4.7e-134 481.5 295 82.4
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 8.8e-133 477.2 300 80.3
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.0e-132 476.1 295 80.3
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 4.4e-132 474.9 295 81.0
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 4.4e-132 474.9 298 80.5
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 2.8e-131 472.2 295 80.7
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 3.7e-131 471.9 297 80.5
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 2.4e-130 469.2 295 80.7
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 1.2e-129 466.8 295 80.0
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 6.5e-128 461.1 341 70.7
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 8.5e-128 460.7 295 79.7
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 4.2e-127 458.4 300 78.0
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 5.5e-127 458.0 303 78.2
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 9.4e-127 457.2 298 77.2
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 1.2e-126 456.8 297 78.5
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 2.1e-126 456.1 300 77.7
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 3.6e-126 455.3 302 76.8
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.0e-125 452.2 300 76.7
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.0e-125 452.2 300 76.3
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 4.0e-125 451.8 300 76.3
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 5.2e-125 451.4 300 76.3
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.2e-125 451.4 300 76.3
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 1.5e-124 449.9 274 84.7
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 2.6e-124 449.1 301 76.1
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 5.7e-124 448.0 312 76.9
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 9.8e-124 447.2 303 75.6
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 1.7e-123 446.4 305 75.4
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 2.2e-123 446.0 305 76.1
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 2.8e-123 445.7 300 75.7
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 3.7e-123 445.3 300 75.7
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 4.8e-123 444.9 301 77.4
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 8.3e-123 444.1 306 75.2
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 1.8e-122 443.0 295 75.6
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 5.4e-122 441.4 331 71.6
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 5.4e-122 441.4 331 71.6
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 5.4e-122 441.4 304 73.0
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 7.0e-122 441.0 294 77.2
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 1.2e-121 440.3 308 73.7
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 2.0e-121 439.5 312 74.4
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 2.7e-121 439.1 312 75.0
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 4.5e-121 438.3 302 75.8
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 5.9e-121 438.0 299 74.6
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 1.3e-120 436.8 312 73.7
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 2.9e-120 435.6 314 73.2
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 3.8e-120 435.3 301 75.1
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 3.8e-120 435.3 309 74.1
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 6.6e-120 434.5 300 75.3
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 8.6e-120 434.1 306 72.9
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 1.5e-119 433.3 310 74.2
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 1.9e-119 433.0 302 75.2
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.9e-119 433.0 302 75.2
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 2.5e-119 432.6 275 77.8
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 4.2e-119 431.8 306 70.9
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 7.2e-119 431.0 296 74.0
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 9.5e-119 430.6 306 71.2
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 1.2e-118 430.3 306 70.6
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 1.6e-118 429.9 306 70.3
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 2.8e-118 429.1 306 70.6
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 6.1e-118 427.9 306 70.6
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 1.0e-117 427.2 275 76.4
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.0e-117 427.2 269 78.1
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 1.0e-117 427.2 305 72.5
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 1.4e-117 426.8 306 70.6
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 1.8e-117 426.4 306 70.6
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 1.8e-117 426.4 306 70.6
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.8e-117 426.4 301 75.1
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 3.0e-117 425.6 306 70.6
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 5.2e-117 424.9 306 69.6
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 5.2e-117 424.9 302 74.5
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 5.7e-116 421.4 307 69.7
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.7e-115 419.9 271 76.4
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 6.3e-115 417.9 305 71.5
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 6.3e-115 417.9 287 75.3
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 6.3e-115 417.9 296 70.6
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 8.3e-115 417.5 305 70.8
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 5.4e-114 414.8 335 64.8
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 7.0e-114 414.5 305 71.1
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 9.2e-114 414.1 307 69.7
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 2.8e-110 402.5 304 69.1
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 3.1e-109 399.1 314 67.8
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 9.8e-108 394.0 271 73.4
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 2.9e-107 392.5 278 73.7
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 8.3e-107 391.0 319 66.5
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 4.1e-106 388.7 336 63.7
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 1.6e-105 386.7 306 66.0
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 8.9e-101 370.9 302 66.6
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 5.8e-100 368.2 320 62.2
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.8e-93 346.7 220 79.1
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 3.4e-92 342.4 310 59.7
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 7.1e-90 334.7 272 64.3
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 5.6e-87 325.1 233 74.7
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 1.6e-86 323.6 272 62.1
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 1.7e-83 313.5 237 70.9
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 9.2e-82 307.8 278 59.0
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 2.3e-80 303.1 201 78.1
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 2.4e-74 283.1 254 60.6
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 1.0e-72 277.7 296 51.7
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 1.1e-71 274.2 209 71.3
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 4.3e-63 245.7 263 48.3
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 2.7e-57 226.5 312 43.6
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 7.4e-55 218.4 192 64.6
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 1.3e-54 217.6 263 44.9
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 3.4e-52 209.5 155 73.5
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 1.9e-47 193.7 281 38.1
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 5.3e-45 185.7 244 43.4
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 5.0e-43 179.1 237 43.0
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 3.0e-40 169.9 289 43.6
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 5.0e-35 152.5 116 67.2
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 5.7e-31 139.0 228 38.6
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.1e-26 124.8 88 71.6
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 4.5e-20 102.8 74 64.9
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 4.2e-18 96.3 93 57.0
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 4.2e-18 96.3 79 60.8
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 6.8e-16 89.0 135 44.4
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 6.5e-11 72.4 79 58.2
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.5e-07 61.2 60 43.3


User provided reference genes

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